Solenopsis invicta (red fire ant): 105199233
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Entry
105199233 CDS
T03916
Name
(RefSeq) helicase domino isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105199233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soc03036
]
105199233
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
105199233
SWR1 complex
105199233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
DEAD
Motif
Other DBs
NCBI-GeneID:
105199233
NCBI-ProteinID:
XP_025993751
LinkDB
All DBs
Position
14:11310899..11342596
Genome browser
AA seq
3012 aa
AA seq
DB search
MHGVRAMSDKQGAPILPPLNRGAANNGGNNGSSAQQTVSLQQVLTSPQGLNVLSTSGQQY
VITTQMPGLQVIPPNNATTNASGTQQVGVTRFVNITPPRNAVGSVGVAGTSPHSSPVVSR
SQNSTKVMLTTSPKLVRTSISNVFVAPMSSSSSSSQVSSPQVQVQSPSPPARKRLKLSET
TEKLIPFDAIGYRRRIMEHKMRRMRSVREKYSENASELYFLHTGGNIMDYYTWRKRSPTP
HFVNFLRQHRLDPDDEDEDLTTPLSSIPEFSQLSAVATTVTTTTASSAIVTATTAVTTVT
SSSTLVQIPNQRAEVKIAGVGSTPVAVSTTLPAAALAQLTQGQVPGRPQGGRHGMVFAFR
AAIQSSPVTVHPPSASTVAPTLIIGGTSVVADSKLATTTANPVVEKSSPSITTIATLKTS
ITSTTLNNPQPIVKLVKLSTPTTITTSCDITNNQEQIVEKAKQEAYVMQRIAELQREGLW
SERRLPKVQEPTRTKAHWDYLLEEMVWLAADFAQERKWKKAAAKKCARMVQKYFQEKAIQ
AQKAEKSQELRLKKIASLVAKEIKTFWANVEKLVEYKQQTRLEEKRKKALDQHLNFIVGQ
TEKYSTWLTEGLNKTDGPQSIPASINSSRISSPVPLGKSHSDEEFQPNQSSDDDEETIAK
AEEEMKTTNHKEEVELLKRESEIPLEDLLKDLPQDYLEDRNRSLSPLDATNEEQNESEEA
VDADADFVAASGESSDEEDTILEEERLEGEIDHKRELDELKADNEMSIDELAAKYANMSD
MLMDIEEAEGTDNSDKEAVQEIEISSSESESEESDRESDEEEAQTQSDTEADIGLQSLLE
DPSAEKQSDSRISDHSDAHNEMDNVAALAESIQPKGNTLLTTSVVTKIPFLLKHSLREYQ
HIGLDWLVTMYERKLNGILADEMGLGKTIQTIALLAHLACEKGNWGPHLIIVPTSVMLNW
EMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKY
LILDEAQNIKNFKSQRWQLLLNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHRE
FKEWFSNPVTGMIEGNSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLS
KRQRFLYDDFMSRAKTKETLASGNLLSVINVLMQLRKVCNHPNLFEVRPTVSPFQMETIE
FVTASLIWSALDYDPFKHIQLSSLNLLLIDIEMTLSAFVAHRVNRLRTPRKLIEEIDTQP
EPAPRCPSGRIKINVRLSNQAKPQQQQQQAQTRLKHLAGVLPTQRVGTSPLIKSLNTSQS
GLGQGVTLRVASGQQLQGYSLQLVPHQGSVKAIPVATLGHNPQSTTVTSTTAVTNAQRIT
MGNASLRDGLQRLTAQTVTVKQGDSVQRIAVPSFAQLVQTTTGRHFIFTSTQNQQNTNTV
SFPVMTSSTPRFTVLSKHSLMGLSTSGATTMNKVVSGVVTTPSGRPIMRVPPLNVTASQS
SPSGNNGQQTASQQQPQSIRGIVTRQVQKEIAKAQSKEEPKSEFYLPQLEEEKRQRRQSK
LHLIANINERRCAACPLYGEDLFMALRIGKPATACRWHNAWVHCTTTQEKIRTRKEFFTH
TEALAEAIKSTEQIVEELKEVFERFVVYVPAVRAPVPRFHVSHPPPYKLWNERRLWADLQ
RQLSPKLSLFHPISSHMLTQFPDPRLIQYDCGKLQSLDCLLRKLKSGNHRVLIFTQMTRM
LDVLEAFLNFHGHIYLRLDGTTRVDQRQILMERFNGDKRIFCFILSTRSGGVGVNLTGAD
TVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLLGDLAI
EGGNFTTAYFKSSTIQDLFNIDQTENDASTRMAEVLDQNRDREKAWNKDVAAGPFQGLSG
QHAEEKTAMGALESALAAVEEDLDVQAAKTAKAEAVADLAEFDENIPLEEADKDDTQVSK
AEQEVQNLISQLTPIERYAMKFVEESEGAFSAAQLAAAERELEQQKKEWELDRLRALREE
EERRMRLADDDEKPLTFGREDAQNQVNSTAAKGGSRRLVSKKLMVPSRRSLRRRGGNRRR
RARKLSSESEIETTSTESDSDSESQEEDVVEDSLDEESSHTESQSQGDEGEEEEGEDDEG
EGGENEESDEEEEAGEGNEDRRANNRDDSERGGGFSRRKGRLAGSGSCTRNHFDLNSPRT
RSRGNVQINLWTLDVSPILPGVKPNFRRQSKKFHRAKSEETFSSPLSVDACRKRNIRVNM
NAKVSANSDQNSKTEIIETETDRGSSKDKRDPKKEDRNLASSSVNSNSVEQCVADSNAEQ
SIDNHVDSSTSVKAQSDQTRTSELISNDAVDEQSVKKENEKNDEKITNGTNLITICSVQV
TRCSHKMSTTHRKLEPEVNRNEDAENLDVNVSASDSRSSSNTVQPDASLKRPKETIAKSK
SEFGASANSLCNNTRGKLTIAAPKESDKSGESPSSRSVPLLRSKALRNGSPDRADTISKP
IAISRVSTMQKNSKINVNTDEACGNAVEDKDKNNCDEAHDDVESAISTTQKSGQKFNLKS
ENSNILPQVSEKETSDTVSNAPDFLIPSVKSEFNSNEPKLKIRKVDSVIQRSVTTRNSKI
PSTVNHVEESNIRLMIDKIDYVSENKLGSQTKTGQIARKPDNLQHSLVEQSRITRSTSHS
CMPPPPPPPPLPLVNNDETTQNLPKLIPKRRPDTPLPRPITRSAANYPSVRIDPILPNRV
EKYTTRNSKQYQDNGLVNLPFRHNKSITPMKSDSKESPATPVISIKRRPDTPRPNIPPSH
NNELVPRMTRSGSLLNSTFSPKSASSPLSSFPSALRTSTKQVRIPSTSSENENTNLTSAT
YEKPQRTAKIVAIISLDTRNNSSKNSSDQSKSNVNYEMKIQDKELPVSRLSDSLKEQETV
PESCDSSDIKFRRLRRETKRARNISSLEDEDGSNDVSDEDPPQRRSRSSQISPSPSSSAA
TRSEKMKGTAIS
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgtacgtgcaatgagtgataaacagggtgcacctattttaccaccccttaat
cggggtgcggctaataatggaggaaataacggaagttcagctcaacagactgtcagtcta
caacaggttctcacctctcctcaaggcctcaatgtcctctccactagtggacaacagtac
gttattacgactcagatgcctggtctacaggttataccaccgaacaatgccacgactaac
gcgagtggaacgcaacaagtcggtgtcacaaggttcgtcaacatcacaccaccgcgcaac
gctgttggcagtgtcggtgttgccggcacgtcgcctcattcgtcaccggtggtgtcgcgg
tcacagaactctactaaagttatgctgacaacgtcgccaaaactcgtacgcacctccata
agtaacgtgttcgtggcgccaatgtcctcatcatcgtcgtcgtcgcaggtatcatcgcca
caagtgcaggttcaatcgccatcaccgccagcgaggaaacggttgaaattgtcggaaacg
acggaaaaactgattccatttgatgctatcggctaccgcaggcggataatggaacacaag
atgcggcggatgcgcagcgtacgtgagaaatattctgaaaacgcatcagaattgtacttt
ctgcacactggtggcaacataatggattactatacctggcggaaacgatctccgacgccg
cacttcgtaaattttctacgtcagcatcgactcgacccggatgacgaagatgaggatctg
actacgccactgtcgtcgattccagaattctcgcagctatccgctgtcgcgactactgtc
actactacgaccgccagcagtgctattgttactgctaccaccgccgtcacaactgtcacg
tccagttccacgctggtccaaatcccaaatcaaagagcggaagttaaaattgctggggtg
ggcagtacgccagtagcagtatccaccactctccctgctgcggctctagcccagcttact
caaggacaagtaccaggtaggcctcaagggggccgccatggcatggtgtttgccttccga
gcggcaatccagtcttcaccagtcaccgttcaccctccatccgcttctaccgtagcaccc
acgctcattataggtggaacatcagtggttgcagactcgaaactggcgactactaccgct
aatccagtagtggaaaagtcttcgccgtcgataaccactatcgctaccctgaaaacgtct
ataacatcaactacgctcaataatccccaacctattgttaaactcgttaaattgtctaca
cctactaccataactacttcttgtgatatcacaaataatcaggaacaaattgtggaaaaa
gctaaacaggaggcgtacgtgatgcaaaggattgcggagttgcaacgtgagggattatgg
tcggaacggcgattgccgaaagtgcaagagccgacccgaaccaaagcccattgggattac
ttgctggaggaaatggtctggttggctgctgactttgctcaggaacgtaaatggaagaag
gcagcggcgaagaagtgcgcgagaatggtgcagaagtattttcaggaaaaagcgattcaa
gcgcaaaaggctgagaaatctcaagagctccggctaaagaagattgctagtttagtcgct
aaagagatcaaaaccttttgggctaatgttgaaaaattggtggagtataagcaacaaaca
aggctggaagaaaaacggaagaaggcgttggatcaacatttaaatttcattgtgggtcaa
acggaaaaatactccacgtggttaacagagggtctcaacaagaccgacggtccgcaaagt
attccagcttccataaatagttcacgtatttcttcaccagttccattaggaaaaagtcat
tccgacgaggaattccagccaaatcaaagttcagacgatgatgaggagactatagctaaa
gctgaagaggaaatgaaaacgaccaatcacaaagaagaagtggaattgttaaaaagagaa
tcggaaatacctttagaagatcttctgaaggatttaccgcaagattatttggaagatcgc
aatagaagtttatcgccgctagatgcaacgaatgaagaacaaaatgaatctgaagaagca
gttgatgcagatgcggattttgtcgcagcatctggtgaatcttcagatgaagaagatact
atcttagaagaagaaagactcgaaggagaaatcgatcacaagcgagaactcgatgaactt
aaggctgataatgaaatgtctatcgacgaacttgcggccaaatatgcaaatatgtcagac
atgttgatggacatagaagaggcagaaggtacggataacagcgataaagaagcggtacag
gagatcgaaataagcagtagtgagagtgagagcgaagagagtgatcgtgagagtgatgaa
gaagaggctcaaactcaaagcgatacagaggcggatataggacttcaatctcttctcgaa
gatccctccgcggaaaaacaatcggatagtagaatctcagatcattcagacgcacataat
gaaatggataacgttgccgcattagcagagagtattcagcctaagggaaatacattgctc
actactagtgttgtcaccaaaataccttttcttctgaaacattctcttcgagagtatcag
catataggattggactggcttgttacaatgtacgagagaaagttaaatggcattttagcc
gacgagatgggtctaggtaaaactatacaaactatcgcgctgttggcgcatctggcatgt
gagaaaggaaattggggaccgcatcttataattgtgccgacttctgtgatgctcaattgg
gaaatggaatgcaaaaaatggtgtcccggattcaaaatactaacatactacggcacacag
aaagagaggaaacaaaagagaacaggatggacgaaaccaaacgctttccacatatgcatt
acatcttataaattagtaatacaagatcaccaaagttttagacgaaaaaagtggaaatac
cttattttggacgaggcgcagaatataaagaatttcaaatcgcagagatggcagttgctt
ttaaattttcaaacacagcggagattacttcttaccggcacacctcttcaaaataattta
atggaattatggtcactcatgcactttcttatgcctaacgtttttcagtcacatcgcgaa
tttaaagagtggtttagcaatcctgtcacaggcatgatcgaagggaacagcgaatacaac
gagaacataatccgtcgtctgcataaggtattgcggccatttcttttaagacgattaaaa
actgaagtggaaaaacaattgccaaagaaatatgaacatgtggtcatgtgtcgtttatca
aagcgtcaaagatttttgtacgatgattttatgtcgagagccaaaacgaaagaaacactc
gccagtgggaatctgttgagtgtgattaatgtattaatgcaactgcgaaaggtgtgtaat
catccgaatttattcgaagtacgaccgactgtttcgccatttcaaatggaaacgatcgag
tttgtgaccgcttcgttaatttggagcgcacttgattacgatccttttaagcacatccaa
ctgtctagcctgaatcttttgctgatagatatagagatgacactcagtgcatttgttgca
cacagagtgaatcgtctgcggacgcctagaaagcttatagaggagatagatactcaaccg
gaaccggcgccgagatgtccgtctggtcgaatcaagatcaatgttagattatcgaatcaa
gcaaagccgcaacagcaacaacagcaagcgcagactaggttaaaacatctggctggcgta
ttacccacgcaaagagtgggtacgtcccctttgataaagtcgttaaataccagccaaagt
ggtctgggacaaggtgttacattgagagttgcgagtggtcagcaattgcaaggttattcc
cttcaattggtgccgcatcagggtagtgtaaaagctatccctgtggcaacattggggcac
aatcctcaaagtaccaccgtgacatcgaccacggcggtgacgaacgcgcaaagaatcact
atgggaaatgctagcctcagagatggccttcagcgattgacggcgcaaactgttacggtc
aaacaaggcgattccgtccagagaatagcggtacctagttttgcgcaacttgttcaaacc
accactggtagacacttcattttcacttcaacgcagaatcaacagaacactaacacagtt
tcttttccagtcatgacgtcgagcacaccgcgctttacagtgttgtctaaacattctctg
atgggtttgtccacgtcgggtgccacgacgatgaacaaagtcgtcagcggagtcgtgaca
acgccgagcggccgacctatcatgagagtacctcctctaaacgtaactgcttcgcaatca
tcaccaagtggaaacaatggtcagcagacagccagtcagcaacaaccgcaatcgatacgt
ggtattgtcactagacaggttcaaaaagaaatcgcgaaggcgcaaagtaaagaagaaccc
aaatccgaattttatttgccgcaattggaagaggaaaaaagacaaaggagacagtctaaa
ttgcatcttatagcaaacatcaatgaacgaagatgcgcggcgtgtccgctttacggtgaa
gatctttttatggctttgagaatcggtaagcccgcgacagcctgtcgttggcacaatgct
tgggtgcactgtacaacaactcaggagaagattcgtactcggaaagagttctttacacac
acggaagcgctcgcggaagctatcaaaagcacggagcagattgttgaagaactcaaagag
gtctttgaaagatttgtagtctacgtcccagctgtacgggcgccagttcctcgattccat
gtatctcatccgccgccgtataagttatggaatgagcgccgtctgtgggccgatttgcag
cgacagctatcgccgaaattgtcgttgttccatccgatttcgagtcacatgctcacacag
tttcccgatcccagattgatccagtacgattgtggcaagctgcagtcgctggattgtctg
ttgagaaagctaaagtctggaaatcaccgggttctaatatttacgcagatgactagaatg
ttagacgtattagaagccttcttgaatttccacggacacatatatctgcgactggacggc
accactagagtggatcaacgtcagattttgatggaaaggttcaacggcgataaacgaata
ttttgttttatcctgtcgacgagatctggtggtgtcggtgtgaatttgactggagcggat
acggtaatattttatgatagcgattggaatcctacgatggatgcccaggcgcaagacaga
tgtcacagaataggacaaacgcgggacgtacatatctatagattagttagtgagaagact
gttgaagagaacattttgaagaaggcaaaccagaaacgattgctaggagatctcgctatt
gagggtggcaatttcactacggcatatttcaaaagttctactattcaagatctgtttaat
atcgatcaaacggagaatgatgcgtcaacgcgaatggctgaagtgctcgatcagaatcgg
gatcgagagaaggcctggaataaggatgtggcagcaggaccgtttcaaggtctttcagga
cagcatgcggaagaaaagacagcaatgggtgctcttgaaagcgctcttgctgctgttgag
gaagatcttgatgttcaggctgcaaagaccgcgaaagcggaagccgttgccgatcttgcc
gagttcgatgagaacattccgttggaagaagctgataaagacgatacgcaggtcagcaag
gcagaacaggaagttcagaatctgatttctcagctgactccaattgagcgatacgcgatg
aagtttgtcgaggagtccgaaggtgcgttctccgcagcgcaactggctgcagccgaacgg
gagcttgagcaacagaaaaaggagtgggaactggatcggttacgggcactacgtgaggag
gaggagcggcgcatgcggctcgctgacgacgacgagaagccgctgacttttggccgcgag
gatgcgcaaaatcaggttaatagcactgccgccaagggcggttccaggcgattagttagt
aagaaactaatggtaccgagtagaagaagtttgcgtagacgtggcggtaatagaaggaga
cgcgcgcgtaaattatcgtcggaaagcgaaattgaaactactagcacggaatcggactct
gattcagagtcgcaggaggaagacgtggttgaggatagtcttgatgaggaatcgagtcac
acggagagtcagagtcaaggagatgagggcgaggaggaagaaggagaggatgacgaagga
gaaggcggagaaaacgaagagagcgacgaagaggaagaggccggcgaagggaatgaggat
aggagagcgaacaatcgcgacgattccgagcgaggagggggtttctcgagacggaaagga
cgtttggcaggttctggttcgtgcacacgaaatcatttcgatttaaacagtccacgcacc
agatcccgtggaaatgttcaaatcaatctttggactttggacgtaagtccgatcctgccc
ggtgtaaaaccgaattttcgtcggcagagtaagaaatttcatcgcgctaaatccgaggaa
actttttcctcgccattatcagttgacgcgtgtcgtaagagaaacattcgggttaatatg
aacgccaaggtttcggctaattccgatcaaaattcaaagactgagatcattgaaacggaa
actgatcgaggttcgtcgaaggataaacgagatccaaagaaggaagatcggaacctcgcg
tcgtcctcggttaattcaaatagcgtggaacaatgtgttgctgattctaacgcggagcaa
tctatcgataatcacgtagactcttcgacatcagttaaagcgcaatcggaccaaacgaga
acgtcggaactgatctctaatgacgcagtggacgaacaaagtgttaaaaaggaaaacgag
aaaaatgatgagaaaatcacgaatggtactaatttaatcacgatctgctcagttcaagta
acacggtgttcgcataaaatgtccacaactcacagaaagctcgaacctgaggtaaatcgt
aacgaggacgcagagaatctcgatgtgaatgtcagtgcgagcgattctcgttcttcgtcg
aacacggtgcaaccagatgcatctttgaaacgtccgaaggagacaatagctaagtccaaa
tcggaattcggcgcatcggctaattctttatgtaacaatacgcgagggaaattgaccatt
gccgcaccgaaagagtctgataagagcggcgagtcaccttctagtcgttcggttcctctt
ttacgatcgaaagcattgcgaaacggaagccctgacagggctgacacaatttctaaacca
attgccatatcccgtgtttccactatgcagaaaaattccaaaattaatgtaaatactgac
gaggcttgtggtaacgcggtcgaggataaagataaaaacaattgtgatgaagctcatgac
gatgtcgagtcagcgatatccacgacgcaaaagtctggtcagaaatttaatttgaaaagc
gaaaattcaaacattttgccccaagtatcggaaaaagagacaagcgatacggtatcaaac
gcgcctgactttttaataccatcggtaaaaagtgaatttaattctaatgaacccaaactg
aaaatacgaaaagtggatagcgtgattcaacgaagcgtaacaactcgtaattcaaaaatt
ccctccactgttaatcatgtagaagaaagtaacattcgattgatgatcgacaagatcgat
tatgtatcggagaataaattaggttcgcaaacaaaaactggccagatagcgcgaaaaccc
gacaatttgcagcattcacttgttgaacagagtagaatcacgcgatcgacaagtcactcg
tgtatgcctccgcctccaccacctccgcctctaccactagttaacaatgacgaaacaacg
caaaatttaccgaaattgataccaaaacgacgaccggatactccccttccgcgaccaatt
acgagatctgcagcgaactatccttctgtgagaattgatccgatattgcctaatcgagtt
gaaaaatacacgacccggaactcaaagcagtaccaggacaacggcctggtcaatcttccg
tttagacataataaatcgataacgccgatgaaatcggactcaaaggaaagtccggcgacg
cccgtgatctcgataaaacgtcgtccggacacaccccgacctaatataccgcccagtcat
aacaacgaactagtacccaggatgacgcgttcaggatcgcttttaaattccactttctca
ccaaagtcagcatcgtcgccgttgtcttcttttccttccgcgcttaggacgagtacaaaa
caggtacgaatcccatcgacgagcagcgaaaacgagaacacgaatctgacatcggcaacc
tacgagaagcctcaaagaacggccaagattgtggctattattagtctggatacgagaaat
aacagtagtaagaattcatcagatcagtctaaatccaatgtcaattacgagatgaagatc
caggacaaggaacttcctgtgtctcgattgtcagattcgttgaaggaacaggagaccgtt
cctgagagctgcgactcgtccgacataaagttcaggagactgcgtagagaaacgaagcgc
gctagaaatatatcaagtttggaagacgaggatggttctaacgatgttagcgacgaagat
ccaccgcagaggagatctcgctcttcacagatctctccctcgccctcttcctccgcagcg
acacgatccgaaaaaatgaagggcaccgcaatatcttga
DBGET
integrated database retrieval system