Solenopsis invicta (red fire ant): 105199254
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Entry
105199254 CDS
T03916
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105199254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soc03032
]
105199254
03400 DNA repair and recombination proteins [BR:
soc03400
]
105199254
DNA replication proteins [BR:
soc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105199254
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105199254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
BRCT_TopB1_SLF1
ECT2_BRCT0
DUF285
DUF3450
Motif
Other DBs
NCBI-GeneID:
105199254
NCBI-ProteinID:
XP_025993747
LinkDB
All DBs
Position
14:complement(11359985..11370224)
Genome browser
AA seq
1285 aa
AA seq
DB search
MMTQESQVECDVNIHFVVPKHLDSEDVCSEQMWQAFNKCSELGLNPEWVSEEVCNNMKPV
KNDVFIIEEFEGDLFEKLKDYKCSRIVSPKCLLICFTNGESIPEGKSPIYTTAMRKMCIC
ASGFNQETKDWIQQRVEYMGGFFTKKFRGCVTHLVADSVMSAKYEGAVEIKIPVMTKEWI
EAVWKANLKEVIRADDETFDKYKCPVFMNLIVTSTNLHKSQKEEVKRVIHSHGGTFMGPL
DGTKVRVVLASENGPLSDKLKYAMENNIPCLKLDWMYESIKVGYALPFRNFIIKSVKACS
TPEKPNTRELLNCSEISSIAHDKHQNNYINETLSSTISNFSRVHTVTSKFSDVTKLNVLD
RLTFGEAKSAGPFLDGCNIYLVGFVTSVRDKLNRILNVGGATRLDDVSDAVTHVIVGDEN
KASTELKMIKSRGLCPYILNIDWLEESIKLKRPASEENFLFEAKNEASKKNVETPASPLS
KKNLQLLQRPKRPPVPSFKKVAPENENEQPDLVQQYLQESNDSCSVNSVREFTKPISEGK
DQENLNDTKYVRTSEICSLNVAPTKNMENDNTVLLSQNCTVNEQLFKGLTFVVTGFDNED
NHIEETIVMLGGRLISKTYNGIPDYGVVPVQGAPLQHTVNEIVSHLFIEDCIKQEQIVEL
KYYHRPISIRKRCNPLSECVITMSMYTGVERDYLSTLAMELGAICQDMFARKVNAEKNTH
VSTHLVCPSPEGNKYNAAVRWKLPAVTAEWLKTCADQLTFVDETPFLVGETRAPDRSNIT
SQTNLLSESRLDLSGEATSRNIITPKRRLSQFKDAGETPLINKRLSLVMHQTPQSPFHVS
TPETPYGQVFKPNPSPDTRKGWIKWVDNFPDLQTSEPPFKRRPPSTPLSDLKRQLWEKIK
NAGQIEKEHESNEVRHNDSITERGAEQIDDQSNKTAPSISTSIIQKLDFNEEDNPIPNNE
INMQIAQLDQMLQRTSSTPENRHSLSWENMKTYNETSDHIQKCIIKDSQPIDAIVWEDPD
HPKRSILDKRSSKDNHSNVISEEHVDENLEEHECRSSIKRKFMLSGIKEKNAYEQVIRDL
GGEVSTDANFDNSATHLLCIRLSRNEKMLGSVAAGKWVLHCSYLRDSEQDGKFLDEEEYE
WGNPKSKNKIPKPNGEIEIAIAAAVYRWRLKLQKELHGPFSNIVALLMVSEEKYDQFKRL
IKAGGGMVVQAKPPYDANLSGHKITHCFVNVKQVNQPVDWAMLASKGILCFLPQYLSDYL
TAETPLNPRDCVLPEFKKYLTLLPK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccaggaaagtcaggttgagtgcgacgtaaacattcactttgtcgtaccgaaa
catctagactccgaagatgtttgcagcgagcaaatgtggcaggcgtttaacaaatgcagt
gagctaggattgaatccagaatgggttagcgaggaggtttgcaataacatgaagccagtg
aaaaatgatgtatttattatagaggaatttgaaggtgatctttttgagaaattaaaagat
tacaaatgctccagaattgtatcaccaaagtgcctgcttatttgttttacaaatggagaa
tcaataccagaagggaaaagcccaatatacacaactgctatgagaaaaatgtgtatatgt
gcatcaggtttcaatcaagaaaccaaggattggatacaacaacgggttgaatatatgggt
ggcttttttacaaaaaaattcagaggttgtgtaacacatttagtagcagattctgtaatg
tccgcaaaatatgagggtgctgtagaaataaagataccagttatgacaaaagaatggata
gaagctgtctggaaagcaaatttgaaggaggtgattagagcagatgatgagacttttgat
aaatataaatgtccagtttttatgaatctaatagtaacctcaacaaatcttcacaaaagt
cagaaagaagaagttaaacgtgtgatacatagccatggaggaacatttatgggtcctctt
gatggaacaaaagttcgagtggttttagcctccgaaaacggtccgttgagcgataaacta
aagtacgctatggaaaataatattccttgtctgaaacttgattggatgtatgaaagtatt
aaagtaggatacgctctacctttccgtaactttattattaaatctgtgaaagcatgttca
acaccagaaaaaccaaatactcgagaattgcttaactgttctgaaattagctctatagca
catgataaacatcaaaataattatataaatgaaactcttagttcgacgatatcaaatttt
tctcgtgtacatacagtaactagtaaattttccgacgtcactaagctaaacgttttggac
cgacttactttcggcgaagcaaagtcagctggaccatttctggatggatgtaatatttat
cttgttggatttgtgacaagtgttagagataaactgaatagaatattaaacgttggcggt
gcaacgcgccttgatgacgtatctgatgctgtgacacatgtgattgttggcgacgagaat
aaagcctctacagaactgaaaatgattaaatcaagaggtttatgtccttacatattgaac
atagactggttagaggagagcattaagctgaaacgacctgcatcggaagaaaacttttta
tttgaagcaaaaaatgaagcatctaagaaaaatgtggagacacctgcttcaccgctcagt
aagaagaacttacaattgttgcaacgaccaaagagacctcctgtgccatcttttaaaaaa
gttgcacctgaaaatgaaaatgagcaacctgatctcgtacaacaatatttgcaagaaagt
aacgattcatgtagtgttaatagtgtgcgggaatttacgaaacctatttcagaaggtaaa
gatcaagaaaatttaaatgacactaaatatgtgcgcaccagtgaaatttgttcattaaat
gttgcaccaaccaaaaatatggaaaatgataatactgtgctgctcagccaaaattgcaca
gtgaatgaacaattgttcaaaggtttaacatttgttgtgactggttttgacaatgaggac
aatcacatagaggaaacaattgtaatgttgggtggacgcttaatttcgaaaacctataat
ggtatcccagattacggtgttgtgcctgtgcaaggagcacccttacaacatactgtgaat
gaaatcgtgagccatttgtttatcgaagattgcataaaacaggagcaaatcgtggaattg
aaatattatcacagaccaatatctattagaaaacgttgtaatccattatctgaatgtgtc
ataacgatgagcatgtatactggagtcgaacgagattacctttcaacattggctatggaa
cttggggctatatgtcaagatatgtttgcgcgaaaagttaatgctgaaaagaatacacat
gtcagtacgcatctggtttgcccgtccccggaaggaaacaaatataatgcggctgtgaga
tggaaattgccggctgtcactgctgaatggttgaaaacttgcgcagatcaattaacattc
gtagacgaaaccccatttcttgttggagaaacaagagcacctgatagatcaaatatcacc
agccaaacaaatcttttgagcgagagtaggttagatttgtctggagaagccacatcaaga
aacattattacaccgaaacgtcgtttatctcaatttaaggacgccggtgaaactccatta
ataaataagaggctcagtctcgtaatgcaccaaacaccacaatcaccgtttcacgtgtcc
acaccagagactccgtatggacaggtctttaagcccaatccttcgccggacacacgaaaa
gggtggattaaatgggtggataattttccagatttacaaacatcagagccgccgttcaaa
cgacgcccgcctagcactccgctttccgatttgaagaggcagttatgggaaaaaataaag
aacgcaggtcaaattgaaaaggaacatgaatcgaatgaagtgaggcataatgattccatt
acggagagaggtgcagagcagatcgatgatcagtctaacaaaactgctccgtcaatttct
acgtctattatacaaaaacttgactttaatgaagaagataacccgataccaaataatgaa
ataaacatgcaaatagcgcagttggatcaaatgctacaacgaacatcgagtactcctgaa
aatagacactcgctgtcctgggaaaatatgaagacgtacaacgaaacttctgatcatata
caaaaatgtataataaaggattcgcagcctatcgatgccattgtatgggaagatccggat
catccaaagcgatcaatcttggataaacggtcgagtaaagataatcacagcaatgtaatt
agcgaagaacatgtcgacgaaaatctcgaggaacatgaatgtagatcatcgataaaacga
aaatttatgctgtcgggtataaaggaaaaaaatgcatacgaacaagtgataagagaccta
ggcggagaggtgtcgacggatgcaaatttcgacaacagtgccacgcatctcttgtgcatc
aggctttccagaaacgaaaaaatgcttggtagtgtagctgctggaaagtgggtcctacat
tgctcatatctacgtgattctgaacaagatggaaaatttctcgacgaagaagagtatgaa
tggggcaacccaaagagcaaaaataaaattccaaaaccaaatggtgaaatcgagattgca
atcgcagctgccgtttataggtggcgactgaaattgcagaaagaattgcatggtccattt
tccaatatagtggctctgttaatggtttccgaagagaaatatgatcagtttaagagactg
attaaagctggtggcggcatggtcgtgcaagcaaaacctccttacgatgctaatctgtct
ggacataaaatcacacattgctttgttaatgtaaaacaggtaaaccagccagtagattgg
gctatgctggctagcaaaggcatcctctgcttcttgccgcaatatctcagcgattatctg
acggcagagacgccgcttaatccacgggattgcgtactcccagaattcaagaaatacttg
acgctactgcccaagtag
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