Solenopsis invicta (red fire ant): 105199270
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Entry
105199270 CDS
T03916
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105199270
09122 Translation
03013 Nucleocytoplasmic transport
105199270
03015 mRNA surveillance pathway
105199270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105199270
03041 Spliceosome [BR:
soc03041
]
105199270
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105199270
Spliceosome [BR:
soc03041
]
Complex C
Other components
EJC/TREX
105199270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
105199270
NCBI-ProteinID:
XP_011164692
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Position
7:complement(6139681..6145065)
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AA seq
867 aa
AA seq
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MREYVSIRGMRRKSERNKAKGSPEKKVEKPTRKSTRRRGRRSPSTSPEQDAFVEDAPKST
VPLKELEKETIVHTRLQSKELEQTHGREEKVSSSDINIKVDSPEDEDNGGSVWKVARADA
SPGEIQKLKLCRQRNTSEPSSDTPPSSRKGVKSTSKWQESGEGVAEEADSADEQLVSCTR
TLSSAEQPNDPSSSYPGQDSNEEVSDSKEILPETTSANLLSDDKPNIDQHGESNEANCTA
QIVDIEPGKAGIEPGSPTTALAPSTNGEETVTAVVVKEANPVEDISETATETFIKEASVE
NVRKDSSSEDEEEEDDKAKTHPPVDSSSESNDESHKKSRTSSDRTSPRTIRRKHRNKYRD
SSNSETPDSEDEPVDRKVSEPYVEEEEEEKPSTEYSQENDKERSVSPERTNSHSNNVEKM
EIEHSETIEDKLEENITEKLEQPAPANIQVVVHKPVKVNLKRSFSTRILSEKNEVKRDDT
DASIDNESSTQNKENGSEQEPKSVPRKRRWGTALSTDTAPSFSISTDSLKALVPGAKPLS
INEVRLSKDDDEDRDRHRSNDKRHNSSDIMNDKAMDENLQKNGAAKKGNGKVDNHIATRR
KISIVKEMPHIKSPSPPASKPTNILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIK
SKCIVEYSNEDQAFETRQALHGISWPLSNPKKLHVEYATKEDMETARESSKEQPVARKTE
PLSSDSWQQDWSRDEKTNITKVTVVREWDLGKEDGQQHIREKEREKKEHDKKRRVRSRTP
TLDAHLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHM
AEHARRLEEMRRADRNRDGRRRRSPRK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaatatgtatcgattcgcggcatgaggcgcaagagtgaaaggaataaagcaaag
ggatctccagagaagaaagtggaaaaaccaacgagaaagtcaacgcgtaggcgtggccgg
agatcgccttctacttcgcccgagcaagatgcttttgttgaagatgcacctaaaagtacc
gttccactcaaggagctcgagaaggaaacgatcgtacatacgcgcctgcagagcaaggaa
ttagagcaaacgcatggacgcgaggaaaaagtttcctcgagtgatataaacataaaggtg
gattcacccgaagacgaggacaacggcggctcggtgtggaaagtagcgagagcggatgcg
tcacccggtgaaatacagaaactcaaattatgtaggcagcgcaacacgtcagaaccatca
tcagacacgccaccatcgagcaggaaaggcgtcaagtcaactagcaagtggcaagaaagt
ggtgagggcgttgcagaggaggctgactcggccgatgagcaactggtttcttgtacaaga
acgctcagtagcgctgaacagccgaacgatccctcctcttcatacccaggtcaggactcc
aacgaagaggtaagtgatagcaaggagatcctgcctgaaaccacttcagccaacttgttg
tctgacgataaaccaaacatagatcagcatggtgaatcaaatgaggcaaattgcactgcc
caaatagttgatatcgaacctggtaaagccggtatcgagccgggtagcccaacaaccgcg
ctggctcctagcacaaacggtgaggagaccgtcaccgctgtcgtcgttaaggaagctaat
cctgtagaagacatcagtgaaacggcaacggaaacatttatcaaagaggctagcgtggaa
aatgttcgtaaagattcgagtagcgaggatgaggaagaggaggacgacaaggcaaaaacg
catcctccagtagactcgtcatccgagtcaaacgacgaatcacacaaaaaaagcaggaca
agtagtgaccgaacatcgccacgcacgattcgtagaaaacatcgaaataaatatagagat
tcgtctaattcagaaacacctgattctgaagatgaacctgttgatagaaaagtctctgaa
ccttatgtggaggaggaagaagaggaaaaaccgagtacagaatattcacaagagaatgat
aaagaacgatcagtatcgccggaaagaacaaattctcattcaaataatgtagaaaagatg
gaaatcgaacacagtgaaactattgaagataaattggaagaaaatataactgaaaaattg
gaacaacctgcaccggctaatattcaggtggtcgttcataaacctgttaaagtcaacttg
aaaagatcattctcaacaagaatattatctgaaaagaatgaagtgaaaagagatgatact
gatgcaagtatcgacaatgagtccagtactcaaaataaggaaaatggcagcgaacaagaa
ccaaaaagtgtgccgagaaaacgtcgatggggaactgcgctttctacggataccgcgcct
tcgttttctatatcgaccgattcgcttaaggcgttggtgccaggtgcgaaaccattatcc
attaacgaagttcgtctctcaaaggacgatgacgaggacagagatcgacataggagtaat
gataaacggcacaattctagtgatattatgaatgataaggcaatggatgaaaatttgcag
aaaaatggcgccgccaaaaagggcaacggaaaagtagataatcatatcgcaacgagacga
aaaatatcaattgtaaaggagatgccacacataaaatcaccaagtccaccagcatctaaa
cctaccaatatccttttgatcaagaatctagttcgccctttcacactaaatcaaatcaaa
gaacttctctcgcgcactggcaccatcgtggaaaatggattctggatggatcgaattaag
tctaaatgcattgtcgaatattccaatgaggatcaggcttttgagacaaggcaggcactt
catggaatctcttggcctctatcgaatccaaagaagcttcatgtggaatatgctacaaag
gaagatatggagactgcccgagaatcatccaaggaacaaccggttgctcgtaagaccgag
ccactctcatcggattcgtggcaacaggattggagtcgtgacgaaaaaactaatataacc
aaggtaaccgtggtgagagaatgggatttagggaaggaggacggccagcaacacatccgg
gagaaagaacgtgagaagaaggagcacgataaaaagcggcgagtgaggagtcgcacccca
acgttggacgcgcatctatcggcaccggctcgcaagttcaagaagaaagaagacgatcca
ccgccagccaagcttttggacgatctctttagaaagacgaaggcgacaccttgcatatac
tggttgccgcttacaaatgaacagatagtcgtaaaggaggagatgcgacggcaacatatg
gcggaacatgcgcgcagattagaagaaatgagacgtgctgacagaaacagggatggtcgg
cgtcgacgtagtcccagaaaatag
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