Solenopsis invicta (red fire ant): 105199369
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Entry
105199369 CDS
T03916
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105199369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105199369
Transcription factors [BR:
soc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105199369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
105199369
NCBI-ProteinID:
XP_011164745
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All DBs
Position
12:complement(10798822..10819869)
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AA seq
1036 aa
AA seq
DB search
MGQSDDSEDSMYGRHQDLCQKLNMDAVAASEAWKSYETIRQNYTLEGDQLHWIGCAVYVA
CRKFSIPTVGRPGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRARIEK
LEANFSVSMVIFKKYQPIFSDIFKDPREDTSKPSRSRRHKATPCTPSRVFEFCWTLFICI
KGAIHDISDDLVNSYHLLLVCCDLIYNNALLANRKDLLNPNFPGLPANFNDDNYTPPQTA
NCIVNLLCERHDAIAVEAKAIKEYCVRNYINKLFNEKTLRGDQSNFSGMLEAMNFDSNNK
AINKSYEQRMLSVGDFDERIFLAKWRRLNLSNISNSDVFSQNDAKHDQFSKHDVLKGQDA
NENIGSPTQMMNIEDFHEQLQLKREQHAGQYLAPPTPLTGRKYLRSKDMSNITPVTTATQ
SVIKLQALIAGQSAPSESLLQMLNNCSQDVKSSLEAKVKQIGEQFCSNYNSNADMTNAND
GSAFDFGKKRLLMGQTLFYKLLEVILNDEKRKKPNDDITNLLLNEVFIQCLFACCLEIVI
YSYKSNDKIFPWILKALNLDAYYFYKVIEIIIRAEDQLSRDVVKHLNHIEEKILESLAWQ
SDSPLWQTIESLPDGVPSCEEVALPGTLETADLNTSGQPILRRVTLDRERTHDVQQSPIS
SASERFQSPIAASGVAKKRLFSETRVTGQSVLRVGQSVLSSNRMLLDNGQRILLLPDQIA
VSKSSGTTQTLNNPTQATNRDATKPKRTGSVALFFRKFYNLACVRMQDLCNSLEISDNDK
KKIWTIFEYSIKERKLMKDRHLDQILMCAIYVICKLVRMERNSFTEIMRCYRLQPQAESH
IYRSVLIKKVSNDEDPGTSGNERSEDNNMLGENITPPTPTNMTGTSQNFNGEIRDDLIKF
YNKVYVPQVKEFANKFGSTRGSVMNLSLSPLPKGKAPANSPVRRVTSSIMTRTLDPKAIS
ASPAPQLTYCFSRSPAKDLEAINKMMISVDAKKSVGKRLLSDDTDVEMTEGTSKKTATFV
ARKLENIIGERRTQNQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatcggacgactccgaggactcgatgtacggtcgacaccaggatctttgccaa
aagctgaatatggatgcggtcgccgcgtccgaagcctggaaatcctacgaaactattcgg
cagaattacaccctcgagggtgaccaattgcattggataggatgtgcagtgtacgtggca
tgtagaaaattttccatacctacagtaggaagaccaggcactaacgtggaaggcaattgt
gtatcacttactcgtcttttgcaactgtgtaatctccccttgatacaattctttacaaag
agcaagtcatgggcagatatggcaaatatgccacaggactttcgagcccggatagagaag
ctagaagctaatttctcagtgtcaatggttatatttaaaaaatatcagccaatattctct
gatatatttaaggacccacgagaggatacctctaagccatctaggtctagaagacacaaa
gcaacaccctgtacacctagcagggtttttgaattttgttggacattattcatatgcata
aagggtgcaatccatgatatctcggacgaccttgttaattcttatcatctcttgctggtc
tgctgtgatcttatatataacaatgctttattggctaatagaaaagacttgttgaatcct
aattttcctggcttgccagcaaatttcaatgatgacaactataccccaccacaaactgca
aattgcattgttaacttgctatgcgagcgtcatgatgccattgcagttgaggctaaagcc
ataaaggagtattgcgtgagaaattacataaacaagctatttaatgaaaaaaccttacgt
ggagatcaatcaaatttctctggtatgctagaagcaatgaattttgatagtaacaacaag
gccattaacaagtcttatgaacagcgtatgctaagtgtcggagactttgatgaaagaatt
ttcttagcaaaatggaggagattaaatttgagcaatatatcaaattcagatgtatttagc
caaaatgatgccaagcatgaccagtttagtaaacatgacgtcttaaaaggccaagacgct
aatgaaaacattggttctcctacacaaatgatgaacatcgaagattttcatgaacaattg
caattgaagagggaacagcatgctgggcaatatctggctcctcccacaccattgactgga
cgtaaatatcttcgatcgaaggatatgtctaatataacaccagtgactacggcaactcaa
agcgtcattaagttacaagctttgatagctggacaatctgctccaagcgaaagcttattg
cagatgctgaacaactgttctcaagatgtcaaatcctcactcgaggcaaaagttaaacag
attggtgaacaattttgttcaaattataatagtaacgcagatatgactaatgcaaatgat
ggttcagcatttgactttggaaagaaacgtcttcttatgggacaaaccttattttacaag
cttctggaagtgattctaaatgatgaaaaacgcaaaaagccaaatgacgacataactaat
cttctcttgaatgaagtctttatccaatgcctttttgcctgttgtctcgaaatcgttata
tattcgtataaaagcaacgacaagatatttccctggatactgaaagctttgaatctagac
gcttactatttctataaggtcatagaaattataataagagccgaggatcaactgtcgcga
gatgtggtcaagcatttgaatcacatcgaggagaaaattctagaatccctggcttggcaa
agtgatagtcctttatggcaaaccattgagtctttgccagatggtgtgccaagctgcgag
gaagttgccttgcctggtactttggaaactgctgatctgaacacatctggtcaacctata
ttaagacgtgttactttagatcgggaacgtactcatgatgttcaacaaagtccgatttcg
tctgcttcagaaagatttcagtctccaattgcagcatctggtgtggcaaaaaagcgatta
ttctccgagaccagagtcaccggtcaaagcgtccttcgtgtcggacaaagtgtgttgtct
tctaatagaatgttattagacaatggccaaaggattctcttattacccgatcaaattgca
gtttctaaatcatcgggcacgacacaaacgttaaataatcccacacaagcaacgaacaga
gacgccaccaaaccgaagagaacgggttctgtcgcgctgttcttccgaaaattctataat
cttgcatgcgtacgcatgcaggatttgtgcaattcattggaaatatcagacaacgataag
aaaaagatttggacgatcttcgaatactctatcaaggaacgtaaattaatgaaggatcgg
catcttgatcaaatcttaatgtgtgcaatttatgtaatatgtaaactggttaggatggaa
agaaactcgtttaccgaaatcatgcggtgttatcgtttacagccgcaggccgagtctcat
atatatagatcggtacttattaagaaagtttctaatgacgaagatccgggaacgagtggt
aatgaaagatcagaggacaataatatgttgggagagaatataactccaccgacaccgaca
aatatgaccgggacgtctcaaaattttaatggggagatacgcgacgatttgattaaattt
tacaacaaggtgtatgttccacaagtcaaggaattcgcgaataaatttggatccactcgc
ggcagtgttatgaatctctcattgagtcctttaccgaaaggaaaagcacctgctaattct
ccagtgagacgtgtcactagtagtattatgacacgcactcttgatccgaaggctattagc
gcatcaccagcgccacaattaacttattgcttcagccgtagtcctgccaaggatttagaa
gctatcaacaagatgatgatatcggtggatgcgaaaaagagtgtaggaaagagattactt
tctgatgacacggatgtagaaatgacagaaggtacatctaaaaaaactgcaacttttgtt
gcacgaaaattagaaaatattattggagaacgacgaacgcaaaaccaataa
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