Solenopsis invicta (red fire ant): 105199401
Help
Entry
105199401 CDS
T03916
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105199401
Transcription factors [BR:
soc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105199401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
PAS_9
PAS
HLH
SNURF
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
105199401
NCBI-ProteinID:
XP_039303162
LinkDB
All DBs
Position
3:complement(29121723..29130024)
Genome browser
AA seq
698 aa
AA seq
DB search
MFNRIDASKSTKGASKLRRDLINAEIANLRDLLPLPPSTRQRLSQLQLMALVCVFLRKAN
YFQQALKNCPSESSNVPTPNIGFSKAMSGFIMMMTQQGKLLYISENAADYLGHSMEDLLI
HGDSVYDVIDKQDHMVVQNQLSRNSPIPSDRRLFLCRINVSRNSRRQLRFGDQKVIKNCR
LTSRHHPLFAHHSLLIPQVILVEGHFLPFVPVCNRNEFVFLASCTPVVLPETRESIVQGA
TNIFTTIHSMDMKYLHIDKTAESHLEYTRAELINVSWYNLLHWDSIRTAYCKHQTVIQSD
QERSTTALLKLQCRSGRWFWVHCVLQVKDTSDECQHPIIVCTNQVLSDKEAEVMRSSSWL
YQYSSQTKFTYGLCASGQGRGTVYPSTGSATNQAQEYVRTYSNDTDAQLSPSLHSDRSET
ESHGASKIAQSTDYPNRRLLRDDAEPVDMSISGAEQHEGRGVQGTVSGHQQHALDDAVRY
HHKQYHKSSLHLAGYRAKFVQCHGTQYASGCADVLSVPGTKYYLTDLDRDYCCGAERSGL
LLHKRLPTKALLAPPPPPPPPPSSITTAATEQPPPDTTPLENWGTSPAWSDALQRVPDVV
HQELSPYITTPTTPVNTPDSDTLGHPEAPIFNFDWAGTEQHVPNLKITFHRSSTAATTAG
HSATQPRKQHQDAVQPITLQLPRRKGQSAENDSKDFPK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcggatagatgcgagcaagtctacgaaaggcgccagcaaacttcgaagggac
ctgataaacgccgaaatcgcgaatctacgtgacttactgccgttaccgccctcgacacgc
cagaggctttcccagctgcagcttatggccttggtctgcgtgttcctgcgaaaagccaac
tactttcagcaagcattgaaaaactgcccgtccgagtcctcgaatgttccaacacctaat
ataggattttcaaaagcgatgtccggcttcattatgatgatgacgcagcaaggaaaattg
ttatatatatcggaaaatgcggcagattatctcgggcattctatggaggatttactcatt
cacggggacagcgtgtacgatgtgatcgacaagcaggatcatatggtcgtgcaaaatcaa
ttatcccgaaacagtcccattcccagcgacaggagactgtttctttgtcgaatcaacgtg
tcaagaaattctcggaggcagctgcggttcggcgatcaaaaggtgattaaaaactgtcga
ttaacttcaagacatcacccacttttcgcgcatcattcgcttttaattccgcaggtaatt
ctcgtggagggtcactttttgccgttcgttcccgtatgcaatcgcaacgagtttgttttc
ctggcatcgtgcaccccggtggttctgccggagacgcgagagagcatcgtccagggcgcg
acgaatatcttcaccacgattcactcgatggacatgaagtacctgcacatcgataaaacc
gcggaaagtcatctggagtacacgcgcgccgagctgatcaatgtgtcgtggtacaatcta
cttcactgggactctataaggaccgcctattgcaagcatcaaactgtcatccagtcagat
caggagcgatccacgaccgctctactaaagctacaatgccgctccgggaggtggttctgg
gtccattgcgtgctgcaggtcaaggacacttccgacgagtgtcagcaccctataatcgtt
tgcacaaatcaagtactcagtgataaagaggcagaggtaatgcgctccagttcatggttg
tatcagtattcgtctcaaacaaagttcacgtacgggctctgcgccagcggtcaaggtcgc
ggcaccgtttatccctccacaggatccgctaccaaccaagcccaggaatacgttcggacg
tattccaacgacactgatgctcagctttcgccgtcgcttcattcggaccggtccgagacg
gagtcgcatggtgcctcgaagatcgcgcagtcgacggactaccccaacaggcgtcttctg
cgggatgacgcggaaccagtggacatgtcgataagcggtgcggagcaacacgagggcagg
ggcgtccagggtacggtttctggtcatcagcagcatgccctggacgacgcagtcaggtac
caccacaagcagtaccacaagagctcgttgcatctggccggttatcgggccaaattcgtg
cagtgtcatggcacgcaatacgccagtggctgcgcggacgtgctgtcggtaccgggtacc
aagtattaccttaccgacctcgaccgggactactgctgcggtgcggaacgaagcggtctg
ttgctgcacaagcggctaccgacgaaggcgttgctcgcaccgccaccgccgccgccgccg
ccgccgtcctcgattaccaccgcggcgaccgaacagccgccgcccgacaccacccccctg
gagaattggggcaccagcccggcgtggtcggacgcgctgcagagggtgccagatgtggta
caccaggaactgagcccgtatatcaccacaccgaccacgccggtcaacacgcccgattcg
gacacgctcggacacccggaggcacccatcttcaacttcgattgggccggcaccgagcaa
cacgtgccaaatctgaagatcacctttcaccgcagcagcaccgcggctaccaccgccggc
cactccgctactcagcctaggaagcaacatcaggacgcggtgcagcctatcacgctacag
ttaccacgtaggaaaggacagtccgctgaaaatgacagcaaggatttcccgaaatga
DBGET
integrated database retrieval system
