Solenopsis invicta (red fire ant): 105199411
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Entry
105199411 CDS
T03916
Name
(RefSeq) RNA-binding protein spenito isoform X1
KO
K13190
RNA-binding protein 15
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105199411
03041 Spliceosome [BR:
soc03041
]
105199411
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105199411
Spliceosome [BR:
soc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105199411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
RRM_Thc1
RRM_8
Motif
Other DBs
NCBI-GeneID:
105199411
NCBI-ProteinID:
XP_011164825
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All DBs
Position
3:29204538..29211132
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AA seq
773 aa
AA seq
DB search
MIGIPRDDRHKITVKIRNNMKRSSSRDTPPPRVKRSRSSMGRYDDSSDERISPERIRRRS
RGARSPSPPTRASSHARYVESSSHRDEYLRASRDVPRERPYSYKVLCVSSIHPKASDEVI
KDTLYREYKKFGDFSIQISHEPDERVAYVCFRSSEDARDAKHAKPRIIMYDKMALVDPVF
DRPETYRRPRSITPPDYERYYARSPGPTDRHRPLERYERVYGPPVGLPPHREMRRETIPP
PHHEFVRPPIHPHGPPHVHPGPPHHYGPPRHMMMRHPVHGFERVENKKDKFPNYLHHVSP
EDDPLATRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDM
AHRCKVELSGQYIGKFQCKIGYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDY
IKGDSNAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTPGFNFKPRSYPEDNND
FRPRPVDYESPYDPYGPDGEFGYGPRGFRGGGRGNAPWHDRRGSSRGGYRGSYPEGYVRD
ETEWPNRRPPPELEYETPRGLRRSLSREPGVDRSRSRSPRRRQMDSDSDSENARTGMLST
SRTLPDVARKSIAVWQGALILKNSLFPAKFHLTDGETEIIDSLMKDEEGKHMLRITQRLR
LDQPKLDDVSKRIQTSSSHAIFLGLAGSSTAITNDDTNVQTRPLRNLVSYLKQKEAAGVI
SLLNKDTEGTGVLYAFPPCAFSTELLKRTCPSLSEESLKEDHLVIVVVKGGSA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgattgggattccgcgggacgatcggcacaaaatcacggtcaagatccgcaacaacatg
aagaggagctcgagtcgcgacaccccgcctcctcgtgtcaagcggagtcgatcttccatg
ggacggtacgatgattccagtgacgagcgcataagcccggaaaggattcggcgacggagt
cgaggggccagaagtcccagtccacccacgcgggcgtcctctcacgcccgctacgttgaa
tccagctcacatcgcgacgagtatttgcgcgcgtcgcgcgacgtgccgcgggagcgaccc
tacagctacaaggtactctgcgtcagctccatccatccgaaggccagtgacgaggtgatc
aaggacacgctgtacagggagtacaagaaattcggggatttctccattcagatctcgcac
gagccggacgagcgcgtcgcctacgtgtgctttcgaagctcggaggacgcccgagacgct
aagcacgcgaaaccacgtatcatcatgtacgataaaatggccctggtggatccggtgttc
gacaggccagagacttatcgtcgtccgcgctcgatcacgccgccggattacgagaggtat
tacgcccgttcgccgggtcctacggaccgacacaggccgctcgagagatacgaacgtgtg
tacgggccaccggtgggtctgccccctcatcgcgaaatgcgccgcgaaacgatcccgccg
ccgcatcacgagttcgttcgaccaccgatacatccccatggaccaccgcacgttcacccg
ggaccgcctcatcattacgggccgccgcgacacatgatgatgcgccatccggtgcatgga
ttcgagcgagtggagaacaagaaggacaaattccccaattatctgcaccacgtgtcgccg
gaggatgatcctctggcgaccagaactctgttcgccggcaatctcgagatcaatattacg
gaagaggagctgcgccgtattttcagcaagtacggcatcgtcgacgacatcgacataaag
cgtccaccacccggtactggcaatgcttacgctttcgtgcgcttccaaactttagacatg
gctcatcgatgcaaagtagaactgtcgggtcagtatatcggcaagtttcagtgtaagatt
ggttatggtaaagccaccccgaccactcggatatgggtgggtggtcttggaccatggacc
tccgtgccgcaacttgaacgggaattcgatcgatttggcgctatcaagaagatcgattac
atcaagggcgacagcaacgcttacatcctctacgattcgatcgacgccgcgcaagcggca
gtcaaggagatgcgtggcttccctctaggcggaccggatcgcagactaagagtagatttc
gccgacgtgaccccaggctttaatttcaagccccgatcgtatccagaggacaataacgac
ttcagaccgcgtccagtcgattacgaatcgccatacgatccttacggaccggacggcgag
ttcggttacggaccgagaggtttccggggtggcggcagaggtaacgcgccatggcacgac
aggaggggaagttctcgaggcggttacagaggttcgtatcccgaaggttacgttcgcgac
gaaacagagtggcccaacagaagaccaccgcctgaattagaatacgagacaccgcgcggt
ctgagaagatcgctctcgcgcgaaccgggagtcgacagatcgagatcgcgttcaccgcgt
aggcgacagatggattccgattcagattcggagaacgctcgcaccggcatgctgtcgacg
tctcgcacgcttccggacgtcgcgcgcaaatcaatcgcggtttggcaaggcgcgctgata
ctaaagaactcgttgttcccagccaagttccatctgactgacggcgagacagagataata
gattctttgatgaaggatgaggagggcaagcacatgttacgtattacgcagcgattacgt
ctcgatcaaccaaaattggatgatgtgtctaaacggatccaaacgtcgagctcgcacgct
atcttccttggcttggctggctcgagtaccgcgatcacgaacgacgacaccaacgtgcag
acgcggcctctgcgcaatcttgtctcctatttgaagcagaaagaagctgccggtgtcata
tcgttactgaacaaggacacggagggcactggcgtgctctacgcttttccaccctgtgca
ttttcaacggaacttctgaaacgcacgtgccccagtttaagcgaagagagtcttaaggag
gatcacttggtgatcgtggtggtcaaaggaggtagcgcctaa
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