Solenopsis invicta (red fire ant): 105199631
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Entry
105199631 CDS
T03916
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105199631
Membrane trafficking [BR:
soc04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105199631
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
105199631
NCBI-ProteinID:
XP_011165110
LinkDB
All DBs
Position
8:3852475..3862789
Genome browser
AA seq
1600 aa
AA seq
DB search
MDDRRVADYFVIAGLPGQDDELSEDNETNNKLEDWYQEGTHLKDMHMPPPITDLAVIFPT
LGEHCPEGYTLLECTVTGFPADLNHGSLRTNECYLCYRRGRDKPPLVDIGVIYDGKERIM
QDAEMVLETPKGHMANVNNSTSRIFVTYRRASQKMPCNSLVVTDICVILTNKGESPPHAF
CVINKNLNKGMLGSDVFLCYKKSMNRANLVSFKPTILYKYPMVDYNSFGFPNSVAMFCLP
MGATIECWPKVACKPKPVFSTFVLTVADAAQKIYGSAITFYEELQMEPDTSNCKHNQEIM
NTVENNKNSADNMEITKDKPQVKMKFKRSGILKKLSILELEKLQYTDPASQSLNISKSIC
ILSHWPFFDTFEKFLVFLHRMVNDKPQSVPIEKYISYFLCDIPFPSPQRPRILVQLSSRD
RLILTQPEDLALPRSGASFRQLLINLGPDNCLLILLLILTEQKILVHSLRPDVLTSVSEA
IAMILFPFKWQCPYIPLCPLGLAEVLHAPLPFLIGVDSRFFDLYDPPSDVNCVNLDTNNI
AICDDKKYLNVKLLPKKAARQLRNWLELLSSKIISWGKNSYSQKDRGDEDFSVDREFQQK
RREQALDLEIQDAFLRFMATILKGYRSYLLPITKAPTVGTTDPTSLFNIQAFLRSRDKAH
AKFYTMLIKTQMFIRFIEERSFVSDMDMAGLAFFDECTERVEEENVTLLELDESQHSERT
VFIPPPEAGTNQTPIIYKSFKLNPDLMRPQKNFCLKNPSLSAFGMVPGSPIARRTKHEIK
VAQRMARKQAAMPDRWGRCLLGTCHSLWFLHLPAMLQVSSQPAAVLHQAYEMLVKMQKLR
LDPMEEVCYRAMMQLCGVYGQPVLAVKLLFHMKRSGVQPNALTYGFYNKAVLEATWPSDM
TNSSQLMWNKLRNVIVGAALFKKAGKKSARRRLSSNMDFLTADKTECMEHALSRSSLDSS
HSQDTEAAHSDSTKGSSVSDLPGFGSFELKAKLLRQNSIVKDQTTLSMLQSDELEQTTPS
NPRLTRSVESPLKSPIRTPVTENDPLGALINDETPIVSPCEENDSNCSTSTLTVLNNTTE
ERPGGPLLFRSNILPRSATFHQAVDESGMVGGHLQRSETMPHSVAQQGEQEREKERLEIS
GLGWNKDSVTSSLSSLGSSLKLSFGRYSTGGLAFAKNKDLISSNQLIESLSLSSYISPSS
LTGKKSNEIILGGLNSLKSAATTVVKKFDEIKEAISATSTPVKNKEREQKIAYGISHESL
DSLTDGSIQDRNEIRASGDGNLDLASLYELAECLYPKGIKELEERLAIELVLSSASRCHH
CAAILYDEEIMAGWQPEDSNLNTVCQYCDKATVPLLTATILDYRCEASEKNNDPLMGALV
ELLDQPKESLEPITVPYLNPLVLRKELESVLSQEGDACLTKHRFIQEHPIVYWNLIWYFE
RINLTSHLPDLWLNNDKNSELQRTVGTVGVRTIWDNERLHMDRLPMYLQWKSNSTEDRTL
MQAVITYVRCNDLVEPIKRVALERSKHQTADHPFSIYRDILFLAFVILGRTNIDQGVFDR
EYSLSLEKFSENEEKLLHKIDAPPTMMSVYCRYYFKQLNV
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagaagggtagcggattattttgttatcgccggtctacctggtcaggacgac
gaactcagcgaggacaatgagaccaacaacaagctggaggattggtatcaggagggcact
catctcaaagacatgcacatgccccctcctatcacggatcttgccgtaatattccctacg
ctgggggaacattgtccagagggatatacgctgttggaatgtactgtgactggttttcca
gcggatttaaatcatgggagcttgcgaacaaatgaatgttacctgtgctatagaagaggg
cgggataagcctcctctggttgacattggtgtaatatatgatggaaaggaacgtataatg
caggatgccgagatggtattagagacccctaaaggccacatggcaaatgtgaataattcc
acttcgagaatttttgtaacgtacagacgagcgagtcagaagatgccttgcaattctctt
gtggttacggacatatgcgttatcctgacaaataaaggagaaagtccgccacacgctttt
tgtgttatcaataaaaatctgaacaaagggatgctgggcagtgatgtgttcttgtgttat
aagaagtctatgaatcgagccaatttggtgtcatttaaaccaacgatactctacaaatac
cctatggtggattacaacagttttggctttcctaattctgtcgccatgttttgtctacca
atgggcgcgactatagaatgttggcctaaagtagcgtgtaaacctaagccggtattctcg
acgtttgtcctgacggttgccgacgctgctcaaaaaatatacggttcagcaataacattt
tatgaggagctccaaatggaacctgacacttcaaattgcaaacataatcaggagatcatg
aacacggttgagaataataaaaacagtgcagataatatggagataactaaagataagccg
caggttaaaatgaagtttaagaggtctggtatactgaagaagcttagtatattggaactg
gaaaagttacagtacacagatcctgccagccaatcgctgaatatcagtaaatctatatgt
atactgtctcactggccgtttttcgacacgttcgagaaattcttggtttttctgcatcgc
atggtgaacgataagccgcagagtgtcccgatcgaaaagtatatctcgtattttttatgc
gacataccgtttccaagtccgcagcgcccgcgaatcttggtgcaactcagtagtcgggat
agactaatcttgactcaaccagaggatttagctctgcctagatcgggcgcaagttttagg
caactgctgataaacttgggacctgacaactgtctattgatactgttgttaatattaact
gagcagaaaatattggttcactccttacgtccggatgtactgacttccgtgagcgaggcc
atcgccatgattctgtttccttttaaatggcaatgtccttatatacctttgtgtcctcta
ggattagcggaggtattgcatgcgccattaccatttctcatcggcgtggattcaaggttc
tttgatttatacgatcctccttcagatgtcaattgcgtaaatttggatactaataacatt
gcgatatgtgatgataaaaaatatttaaatgttaaattactgcctaaaaaggcggccaga
cagctcagaaattggttggaacttttgtcctccaagataatttcgtggggaaagaatagt
tattcccagaaagatagaggagatgaagactttagcgtagacagggagtttcaacaaaaa
cgcagggaacaggctctagaccttgaaatacaagacgctttcctaagattcatggcgacg
attctcaaaggatatcgaagttatttattgccgattacgaaagcgcctaccgtaggaaca
accgatccgacgagtttatttaatatccaagcgtttttgagaagtcgcgataaagctcac
gctaaattctacaccatgctcatcaaaacgcaaatgtttattaggttcatagaagaaagg
agctttgtgtccgatatggatatggcgggactagcgtttttcgacgagtgtacagaacga
gtagaggaagaaaatgtaactcttttggaactggatgaatctcaacatagtgaacgtaca
gtatttatacctccacctgaagcagggacaaatcaaacaccaatcatatacaaatcgttc
aagttgaacccggatttaatgaggcctcagaagaatttctgtttaaagaatccatctcta
agtgccttcggtatggtacctgggagtcctatcgctcgtagaacaaagcacgaaatcaaa
gttgctcaaaggatggctcgaaaacaagctgcgatgcctgacagatggggcagatgcctg
ctcggtacatgtcacagtctttggtttctgcatttgccagccatgttacaagtttccagt
caacctgctgcggttttgcatcaggcttatgagatgttagtcaaaatgcagaagttacgt
cttgatcctatggaagaggtatgctacagagctatgatgcaactctgtggtgtatatggg
caaccagttttagctgtaaaattactgttccatatgaaacgcagtggtgttcaacctaat
gctttaacgtacggattttacaacaaggctgttctcgaggcaacttggccttccgatatg
acgaactcaagtcagttaatgtggaacaaattgcgaaatgttatcgtcggtgcggcttta
tttaaaaaagctgggaaaaagagcgctagaagacgattgagttccaatatggacttctta
accgccgataagactgaatgcatggaacatgcgctctctcggtctagtctcgacagttcc
cattctcaggatactgaagctgcacacagtgattctactaaaggcagttctgtgtcagat
ctacctggatttggatcgtttgaattaaaagccaaacttcttcggcagaatagcatagtg
aaagatcaaacgacattaagtatgttacaatcagatgaattggaacaaacaacgccgagt
aatccaaggctaacgcgcagtgtcgaatcgcctttaaaaagtcccatacgcacaccagtt
acggaaaatgacccattgggtgctctcattaatgatgaaacaccaattgtgtcgccttgc
gaggaaaatgattcaaattgctcaacaagtactttaactgttttaaataatacaactgaa
gagagaccaggaggaccacttttatttagaagcaacatcctcccacgtagtgcgacattt
catcaagcggtagatgaaagtggcatggtgggtgggcatttgcagaggagtgagacgatg
cctcattccgtggcacagcaaggagaacaagagagagaaaaggagagattagaaataagc
ggtctcggttggaataaggatagcgtaacgtccagtctctctagcttaggatctagtctt
aaacttagtttcggacgatactccacgggtggattggcatttgctaaaaataaggattta
atatcatcgaatcaacttattgaatctcttagtctatccagctatatcagtccgtcgagt
ttaacagggaaaaaatcgaatgaaataatacttggtggtctgaatagtttgaaatccgct
gcaacaactgtagtgaaaaaatttgacgagataaaagaagccatctctgcgacgagtacg
ccggtgaaaaataaggaacgcgaacaaaaaatagcttatggtatatcgcatgaatctttg
gattctcttactgatggatccatacaagatcgaaatgagataagagcatcaggtgatgga
aatttagatttggcttcgctgtatgaactcgcggagtgtctctatccaaaaggtattaaa
gagttggaagaacgtcttgccattgaacttgtgctttccagtgccagtagatgccatcac
tgtgccgctatcctatacgacgaggagataatggccggatggcagccggaagattccaac
ttaaatacagtctgtcaatattgcgacaaagctactgtaccccttctcacagccacgata
ttagattacaggtgcgaggcaagcgagaagaataatgatcctttaatgggggcgttagta
gaattgctggatcaaccgaaagaatcgttggaaccgataaccgtaccatatctgaatccg
ttagttctcagaaaagaattggagagtgtgctgagtcaagagggggatgcttgtctcacc
aaacacaggtttattcaagagcatccaatagtatattggaacctgatatggtacttcgaa
agaattaatttaacaagtcatctacctgacctctggttaaacaacgataagaactcggaa
cttcaaagaactgtaggaacggtgggtgtcagaaccatttgggacaacgaacgtttacac
atggatcgtttgcctatgtatcttcagtggaagtcaaattccacagaagacaggacattg
atgcaggcagtgataacatatgtccgttgcaacgacttagtggaacctataaaaagagtg
gccttagaaagaagtaaacatcaaacagctgaccatccgttttctatatacagggatatt
ctgttcttggcatttgtcatattaggaagaacgaatattgaccaaggcgtcttcgatagg
gaatacagtttatcgctggagaaattctccgagaatgaagaaaaattattgcataaaatt
gacgcgccgccgacgatgatgtcggtttactgcaggtattacttcaagcaactaaacgtg
tga
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