Solenopsis invicta (red fire ant): 105200428
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Entry
105200428 CDS
T03916
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105200428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200428
03009 Ribosome biogenesis [BR:
soc03009
]
105200428
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105200428
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
105200428
Pre-60S particles
105200428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
Arm
HEAT_2
TOR1L1_N
TPR_IMB1
Cnd1
Vac14_Fab1_bd
HEAT_EF3_N
TPR_IPO5
IBN_N
HEAT_MROH2B_C
TPR_DNAAF5
MMS19_C
PDS5
HEAT_GCN1_C
Adaptin_N
Dopey_N
SCD
HEAT_DAAF5
PIK3R4-like_middle
HEAT_MROH2B_1st
RTP1_C1
INTS7_N
TPR_TTI1_C
XMAP215_CLASP_TOG
CandA_N
Motif
Other DBs
NCBI-GeneID:
105200428
NCBI-ProteinID:
XP_025988485
LinkDB
All DBs
Position
4:complement(28154837..28166373)
Genome browser
AA seq
906 aa
AA seq
DB search
MKMAWHPDEEGLRQILTLLKESQSPDTATQRAVQQKLEELNKFPDFNNYLIFVLTKLTSE
DEPTRSLSGLILKNNVKTYFHKFLPEVINFVKQECLSAVGDPSPLIRATVGILITTVASR
GELTTWPELLPALCQMLDSQDYNVCEGAFGALQKICEDSAEILDSDALNRPLNILIPKFL
QFFRHSSPKIRSHAIACVNQFIIQRTQALMIHIDSFLENLFHLASDDDSEVRKNVCRALV
MLLEVRMDRLIPHMHNIIEYMLLRTQDIDEGVALEACEFWLSLAEQPICKEALAPHLIRL
VPILVKGMKYSEIDIILLKGDVEEDEMIPDREEDIRPRFHKSKTHHSHHANGMGNKHTDE
SNGGVNGGCDDEDIDVEDGCDDDSTLSDWNLRKCSAAALDMLANVFRDELLPVLVPILKE
TLFHQSWEIKESGILALGAIAEGCMSGMIPHLSELIPYLIGCLSDKKALVRAITCWTLSR
YAHWVCAQPHETHLKPLMTELLKRVLDSNKRVQEAACSAFATLEEEACTELVPYLGFILE
TLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNRPDYINLLMPPLINKWNVLKDEDKDLF
PLLECLSSVATALRSGFLPYCEPVYRRCVSLVEQTLNQHIASTQSPEQFEAPDKDFMIVA
LDLLSGLAEGLDGHMERLVMNSNVMQLLYQCMQDTMPEVRQSSFALLGDLTKACFQHVLP
CIPEFMPILGQNLHPQFISVCNNATWAIGEISIKLGPDTSAYIPLILTQLIEIINRPDTP
KTLLENTAITIGRLGYVCPHDVAPMLQQFVRQWCTSLRSIRDNEEKDSAFRGMCQMITVN
PAGVVQDFIFFCDAVASWSAPKEDLKEMFQKILFTFKNQVGEENWKRFSDQFPPQLSERL
HNMYGV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcgtggcatccagatgaggaaggactcaggcaaatcctgacgctgctcaag
gaatcgcagagcccggacacggcgactcagcgagccgtacaacaaaaattggaagagctg
aacaaattcccggattttaacaactatctgatttttgttctgacaaaattgacatcagaa
gacgaacccactaggtctctgagcggactgatattgaaaaacaatgtaaagacgtacttc
cataagtttttaccagaggtgataaatttcgtaaagcaagaatgtctgtcggctgtcgga
gatccatcaccgctgattcgtgcgaccgtcggtattttgattactactgtcgcatcaaga
ggtgaattaacgacttggccggaattgttgccggcgttgtgtcaaatgctggactcgcaa
gattacaacgtttgcgagggcgcgttcggtgcactccagaagatttgcgaagactcggcg
gagatattagattcggacgctctgaatcgccctttgaacattctgattccaaagttcctt
caattctttagacattcgagtcccaagatcagatcccacgcgatagcgtgcgtcaatcag
ttcatcattcaacgcacgcaagcgcttatgatacatatagacagctttttggagaatctc
ttccatttagcttcagacgatgattctgaggtccgaaaaaatgtgtgcagggcgttggta
atgttgctcgaggtacgaatggatcgactaataccacatatgcacaatataatagagtac
atgttattgagaactcaagacattgacgagggagtggcattggaagcgtgcgaattttgg
ttgtcattagcagaacaaccaatttgtaaagaggcacttgcaccacatctgatacgatta
gtacctatcttggtgaaaggtatgaaatattcggaaattgacataatcctcctcaaagga
gacgtggaggaggatgaaatgattccagatcgggaggaggacattcgaccacgttttcac
aaatccaagacgcatcactcgcatcacgccaacggtatgggcaacaagcataccgacgag
tcgaacggcggcgtgaacggcggatgcgacgacgaggacattgacgttgaggatggatgc
gatgacgattcaactctaagcgattggaacttgagaaaatgctccgccgccgcgttggat
atgttagccaatgtttttagagatgagcttctgccggttttggtaccaatcctaaaggag
actcttttccatcagtcttgggaaatcaaagaatctggtatcttggcactaggtgctatc
gcagaaggttgtatgagtggcatgattccacatctgtcggagctcattccttacctgatt
ggctgtctgagtgacaagaaggctcttgtgcgtgccataacttgctggacgttgagccgt
tacgcacattgggtttgtgcgcagcctcacgagacgcatttgaagcctctgatgacggaa
ctattgaaaagggttttagatagcaataaacgtgttcaagaagcggcgtgttccgccttc
gcgactttggaggaagaagcgtgcaccgaactggtcccttatctcggatttattcttgag
acgctcgtctttgcgttcagtaaatatcagcacaagaatcttttaattttgtacgacgcg
atcggcactcttgccgattctgtgggtcatcatctgaacagaccagactacatcaatctt
ttgatgccgcctctcatcaataaatggaacgtactgaaagatgaagataaagatctgttc
ccgttgttggaatgtctttcctcagtagcgaccgcgttacgttcgggtttcttaccatac
tgcgaacccgtatacaggcgatgcgtgtcacttgtggagcaaacgctaaaccaacatata
gcgagtacgcaaagtccggagcaatttgaagcgcccgataaggacttcatgatagtcgcg
ttggatcttcttagcggattagcggaagggttggatggtcacatggaacgtctggtaatg
aacagcaacgttatgcagctgttgtaccagtgtatgcaagataccatgccggaagttaga
cagagtagcttcgctttattaggagatcttacgaaagcctgcttccaacacgtgctgccc
tgcataccggaatttatgcctatacttggacaaaatttgcacccgcaatttatatcagta
tgtaacaacgcgacatgggcgatcggcgaaatttcgataaaactcgggcccgacacgagc
gcgtatatcccgttaattttaacacagctcattgaaatcatcaatcgaccggatacgccg
aaaacactgttggaaaatacggccataacgatcggtcgcctaggttatgtgtgtccccac
gacgtcgcccccatgttacagcagtttgtccgacagtggtgtacctctttgcgaagcata
agagataacgaagagaaggattctgccttcagaggtatgtgtcaaatgattactgtcaat
ccggctggagtcgtgcaggactttatcttcttctgcgacgccgtggcgtcatggtcggcg
ccaaaggaagacctgaaggagatgtttcaaaagatactgttcactttcaaaaatcaagta
ggtgaggagaattggaaacgattctccgatcaatttccgccgcagctcagtgagcggctt
cataacatgtacggcgtctga
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