Solenopsis invicta (red fire ant): 105200441
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Entry
105200441 CDS
T03916
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105200441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200441
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105200441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
SapB_1
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
105200441
NCBI-ProteinID:
XP_011166300
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All DBs
Position
11:complement(6436250..6443450)
Genome browser
AA seq
1312 aa
AA seq
DB search
MRNTTLTEMEPLKMHLDSLEMAGKMVDKHIIADSNFPSLINLMRYNVQGGPTVSGLDDHD
YPNLNGASITLTNINQMKIHSKIPLPSEVMEHFGHMQCHCMMGLFTEISKAWLTIDSDIY
LWSYENESDVAYFDGLNETIISVGLVKPKAGIFQSYVKYLLILTTTVEITILGVTIPDDG
GEMQLVPEPIFTVTTDGIGITTIANTTSGRIFLGGRNGSLFEIYYQAESSWFGKRCKKIN
HSEGPLSFLVPSFVTMALSEEEAIIQISVDDSRNILYTLGDRGTITVWDIDNGSASKITS
LSQASLVQNTVHVVKTLDSNNFRPLVSISAIMESESVHLNLVVVAATGTRFYFSCTSVTN
PSSRPQGLQLIHVRLPPGYAANAPVMRPRKVQMAYYRKGTLFLVCGGDTETAWCLSNDAY
PFTNYLAETQSILPLDSPAWAMEEIIRDSAIHIEKQSSAQGEPPLLVRQHMEPPRKFIFL
TAQGAIILMQVRPVDILKQLLLEQRGPDTETVRAYFQTQSLEQACATCLILATLESSQNA
QLSEWATRAFFLYGGQRIAGICPPFDMHSSFPTINPDLRTSTPRVPSFDSRVQSFRLPTQ
MGLTTDISLQHFSAKHSGLYLYVGRILRPIWNVRCIKQETISNKSVISSTVPATQIAWIL
GHLQALRSFLNRNTHITKQQSANRGLTDGFETTIQSHFQEPIVEERNSLDALKVFITHAC
EVLGLWKILCENQLNNIVNCLSKDQITQFSTATFRDLILIGHEISSLLIVHLIDSYLGDN
ASVDSVSAKLREICPNLYRSEDAVCSKANEILLKAKGCMNPEEKECYLQSALTLCKEVAP
RLNLNAVCQQFVACQFYTGVLELCICCAERIDPNNAASHYYKNNEPIEDQEGNMAFTKRL
EIYKEFTAMLDHLYHQSISNPLTPTIPSKPGPPLQTASNAIVMPAKEILHEIIDKALHEP
CETLHSSIYTWMIDRGLHGELVAFAAPSLETYLNRVNAPELLWQFYERNKNHAAAAKILD
SLATKVGSEISLSKRVEYLARAVVCMRSDQTGYAPYLGIFLRELEDKLEVARMQQQILEI
ISNQQNLFDSMIVTDAKLRLNSSLLDITQLYEEYAEPLQLWECKLAIIHCSGHQDDMLIK
GIWTNIIDNELENATEPSNEDKMTILMCKIKLLGQEYIGSPHCFPIDFLVKQLEMKACKY
KVTNTSIITSFLELGVAMEDLLDIYDKMIGKNTRIWLNEGNEFHLIESTANLVNYFIKNM
TVTNSFVRRKIITKCQDVISKCLTTLFSKPNGGELEREITNLRSIQSILNRM
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatacgacgcttacagaaatggagccgctaaaaatgcacttagactcattagag
atggctggaaaaatggtagataaacatattattgcagacagcaattttccatctttaatt
aatcttatgcgatataatgtacaaggtggaccaactgtcagtggtcttgatgatcatgat
tatcccaatttaaatggtgcatcaataactttaacaaatattaatcaaatgaagatacat
agcaaaattccattgccttctgaagtaatggaacactttggtcatatgcaatgtcactgc
atgatgggtctttttacagaaatttcaaaagcgtggctcacgattgacagtgatatttat
ttatggtcatatgaaaacgagtctgatgtcgcctattttgatggtttgaatgaaactatt
ataagcgtaggcttagtcaaacccaaagctggaatcttccagagttatgtaaaatacttg
ttaattcttacaacaacagttgaaataactattcttggtgttacaatacctgatgatgga
ggagaaatgcagttggttccagaaccaatttttactgttactaccgatggaattggaatc
actacaattgctaataccactagtggcaggatatttctcggtggtagaaatggatcatta
tttgaaatatattatcaggcagagagcagttggttcggcaaacgatgtaaaaaaattaat
cattcggaaggtccattatccttcctagtaccatcatttgtcaccatggcattgtcagag
gaagaagctataattcaaatatctgtggacgattcacgtaatattttgtatactttgggt
gatagaggcacaatcaccgtttgggacattgataatggtagtgcatctaaaatcacttca
ttgtctcaagcctccttagtacaaaacacagtccacgttgttaaaactttggatagtaac
aattttcggcctcttgtaagcatatcagccataatggaatccgaatcggtacacttgaat
ttggtcgttgttgcggcaacgggaactcgtttttactttagctgcacttcagttacaaat
ccctcgagtagaccacaaggtttacaattaatacatgtcaggttaccaccaggttatgct
gcaaatgctccagtaatgagaccgcgaaaagtacaaatggcgtattaccgaaaaggtacc
ctttttctcgtttgtggtggcgatacagaaactgcatggtgtttaagtaacgatgcttat
ccattcacgaattatttggctgaaactcaaagtattttgccacttgatagtccagcttgg
gctatggaggagattataagagattcagctatacacatagagaaacaaagcagtgctcaa
ggtgaacctcctctgttagtacgtcaacatatggaaccgccaaggaaatttatattttta
acagcacagggagcaatcatcttaatgcaagttcgtcctgtagatatattgaaacaactt
cttttagaacaacgtgggcctgatactgaaacagtacgcgcatattttcaaacacagtcc
ctggaacaagcttgtgctacatgcttaattttggcaacacttgagagttctcagaatgct
cagttgtcggaatgggcaactcgtgcattcttcctgtatggtggtcaaagaatagcaggg
atatgtcctccatttgatatgcattctagttttcctaccataaatccagatttacgtacg
tctacacccagagtgccaagcttcgattctagagttcaatccttccgactgcccacgcaa
atgggtctcaccacagacattagtttgcaacatttctccgcaaaacatagcggattatat
ttatatgttggaagaatacttcgtcctatatggaatgtaagatgtataaaacaagaaaca
ataagtaataaaagcgtgatatccagtacagtaccagcaacacagatagcttggatcttg
ggtcatttacaggcattaagatctttcttgaacagaaatacgcatatcacaaaacagcaa
agcgcaaatagaggtttaacagatggttttgaaacaacgattcaaagtcattttcaagaa
ccaattgtggaagaaagaaactcattggacgctttaaaagtttttattactcatgcatgt
gaagttttgggtttatggaaaatattatgtgagaatcagctaaataacattgtcaattgt
ttatcgaaggatcaaattactcagttttctacagccacttttagagatttgattttaata
ggccacgaaatatcttctcttctcatcgttcatttaattgatagttatcttggagataat
gcgtcagtggattctgtaagtgcgaaattaagagaaatctgtcccaatttatatagatct
gaagatgctgtttgttccaaggcaaatgaaattctcctaaaagccaagggatgcatgaat
cctgaggaaaaagaatgttatcttcaatctgctttaacgctttgtaaagaagtagcaccc
agattgaatctaaatgcagtatgtcagcagtttgtagcttgtcagttctacacaggtgta
cttgaattgtgtatctgttgtgcagaaagaatagatcccaataatgctgcttcacattat
tataaaaacaatgaacctatagaagatcaagagggaaatatggcttttacgaaacgttta
gagatttataaagaatttaccgcgatgttagatcatttatatcatcagagcatttctaat
cctttaacgccaactataccgagcaagccaggacctcctttacaaacagcgtcaaatgct
atagtaatgccagcgaaagaaattttacatgagatcatagacaaagcattacacgaaccg
tgtgagactcttcattcttctatttatacttggatgattgatagaggacttcatggtgaa
ttagttgcctttgctgcaccttcactagaaacttatctcaatcgtgtcaatgcacctgaa
ttactttggcaattctatgaaagaaataagaatcacgctgctgcagcaaaaatcttggat
tctttggctaccaaagtcggatcagaaatatcactctcaaagagagtcgaatatctagcg
cgagcggttgtatgtatgcgtagcgatcaaactggttatgctccttatcttggaattttc
ttacgtgaattagaagataaattagaagtagctagaatgcagcaacagatacttgagatt
atcagtaatcagcaaaacctattcgattcgatgatagttacagatgcaaaattaagatta
aattcttcattacttgatattacacagttatatgaagaatatgcagaacccttacaactt
tgggaatgcaaactggctataattcattgctcgggtcatcaagatgacatgttgattaaa
ggaatttggaccaacataattgataatgaattggaaaatgcaacagaaccatcaaatgaa
gataaaatgaccatcttaatgtgtaaaattaaactgcttggtcaagaatatattggatca
ccgcattgtttcccaattgatttcctggtaaaacaattggaaatgaaagcatgtaaatat
aaagtgactaatactagtattataacttcttttctggaattgggagtagcaatggaagat
cttttagacatatatgataaaatgattggtaaaaatacccgcatttggttaaatgaaggt
aacgaatttcatctgatcgaatcaacagcaaatttggtaaattatttcattaaaaacatg
actgtaacaaatagctttgtcaggagaaagataataacaaaatgtcaagatgttatctcg
aaatgtttaacaactctctttagtaaacctaatggtggagaactcgagagagaaataaca
aatctgcgatcaattcaaagtatattaaatcgtatgtga
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