Solenopsis invicta (red fire ant): 105200476
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Entry
105200476 CDS
T03916
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105200476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soc02000
]
105200476
Transporters [BR:
soc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105200476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
R1_ABCA1
SMC_N
AAA_23
AAA_29
DUF4162
RsgA_GTPase
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
105200476
NCBI-ProteinID:
XP_039306572
LinkDB
All DBs
Position
6:25568001..25577131
Genome browser
AA seq
1671 aa
AA seq
DB search
MASGWKIFGLLMYKNLIVRKRHWRMTIFLQALIPIGLFALLQAVRDFTAQPPVVVNQSTY
YPVYTQDELMQKINNDLNKVYYTPNNIRTHQIMESVRYCLRLLPDNMMGFANETGMVEDY
IFSQAKNPIVSVVAVVFEQYDKPAIKYKLRHSWKIPNNLYQTVADGERMSSSPTIYFELM
PFTQVQICLDETLIKQAAPESNIKLSIQRMPYPPYIRIDDADVIVRELICGIAVTIFVIP
LCIEANYATKEKFIGVTVLMAMNGVKLAYNLFSWLITGLLVSIIYTIPTIILFKNTFSNN
VEAFLEYSNGFIFWLLFTMHIAHLITFGMHIAAYFSKPRFVITVLAIIYTAALSLQENMM
RQEVFGIMSYVGIIFPNIMFYRLFQETNAYESKLIGIQWSTLFVPGKTEFGIVGSPGFIF
LFSFLGAVIHFTFAVYINAVLPGKYGVRKDPLYFLKCFKNNKIIFDEKAGEFDYDKANED
FEPVMSGTLTPGIQIRDLKKSYTTCWLRKSKVHALKGVSVDFYKGQITALLGHNGAGKTT
LMSILTGVISETEGNVFINDKNIRIHLDSIRNNLGLCPQENMVFPDLNVFEQIEFFGLLK
AKNKTRNEIKENVNSLLSKLKLSEKKDFLPSKLSGGQQRRLCLGMALIGDANIIILDEPT
SGMDPETRRDTWDIILKLRGEKTILISTHNMEEADILGDRIAIMHTGHLRSYGTAMFLKK
QYGHGHIEVTLSTKSWCSPEKVISKFDDRTQQLSVDSEKIVLNVPYTDSLSQSLDKVESE
KKELGVTGISVSLITLEQVFLQIVKKEDSGTHLNELFTAPLQKITGSELCMQSIFALFCK
KFAYTRKNLVDLLLILLLPILSVLIMAISYNVPSDNTNIVPLKLDMYRYPKTLYSSSNEL
IGKKYRDFVQNFGEVKRVASDTSVTNALLNSSMENIVEYRNNLIVSAEFNGTEGNTTWAN
GFYSGLAIHSVPLTVNLLSNAFMKDLAGDQYSIAVSRQQLPNTLSSTMIVPEAESISRVL
IFCSFFFPTVALFVAHPLQETATKVKQLQRMTGITSISYWSTMLTFDFLIFTLSVLIITS
ALYIMDIILDVRLYYGTEILCTILILELFGINVLLFVYLFSFMNKSRNTVTTIVGIAPFG
FVVIQYLLHEVIHSFDYLNPLHILQKRIFRLIPYVSLFHGQISFLNIAVQNARCRRLPNT
LHAVVCFAANDPCCGLDCKDGSCKNQLSYFRDFTEDMNFEESIVYLALTPILYFILLIVL
EEKLFSKLFMKIVGTKLRKEQDIMDDQVKKEKLTVAMEINKINNQSAGGKFTKEEPKTNS
PETTNIELLHSPISDSNSLFLVYELSKYYGKLMAVKEISFQVKPRECFGLLGVNGAGKST
TFRILTGEEMSNSGLMYLRQAEIHSDKTKYLSEMGYCPQTDALIPSLNTFDHLRLFARLR
GIPKSNVELEVNKWINRLNLTACMKQPSGTYSGGNKRRLNIAMALIGNPTLVLLDEPTTG
VDPAARRSLWNTLQLCQAAGQAIILTSHSMEECEALCNRLVIMVKGELVCIGASQELKQR
FGAGYDIHVKLNTGRMDEDVNDIKQIIESSLTCDIRDENLGLLAYHVTDCNTTWEKMYDI
MKSLKQRYNCIEDYAVLSATLEQLFIQFARGTEKVESNESELHITSPQETV
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggtggaaaatttttggtttgttgatgtacaagaatttgatagtgcgcaaa
agacactggcgcatgacgatattcttacaagctttaatacctattggattatttgcgtta
ttgcaagctgtgagagattttactgctcagccaccagttgtggtaaatcagagcacttac
tatcctgtgtatacacaagacgaattaatgcagaaaattaataatgatttaaacaaagtg
tattatacaccaaataatatacgtacacatcaaatcatggaatctgttagatattgtctt
agacttctaccggacaacatgatgggttttgctaatgagactggaatggtagaggattat
atattttctcaagcaaaaaatcctatagtttctgtagtggcagttgtttttgagcagtat
gacaaacctgctataaaatataaactaagacattcatggaaaattccaaataatttgtac
caaactgtggcagatggtgaacgtatgagttcgtcacctacaatatattttgaattaatg
ccatttactcaagttcaaatatgtttggatgaaacactcataaaacaagcagcaccagag
tctaatataaagttatcaatacaaagaatgccatatccaccatatatcagaatagatgat
gctgatgtaatagtacgagaactaatttgtgggatcgccgttacaatttttgtgattcca
ctttgcatagaagctaactatgcaacgaaggagaaatttattggtgtaactgttttaatg
gcaatgaatggagtcaaattggcctacaatttatttagttggttaattacagggctatta
gttagcattatttatacaataccaactataattttatttaaaaatactttttcgaataat
gttgaggcttttttggaatatagcaacgggtttatattttggctcttattcactatgcat
attgctcatcttataacatttggcatgcatattgcagcatatttctcaaaaccgcgattt
gtgataactgtcttagctataatttatacggcagcgctttcacttcaagaaaatatgatg
aggcaagaagtttttggaattatgtcatatgttggtataatatttccaaatatcatgttt
tatagactttttcaagaaacaaatgcatacgaaagtaaattgattggtattcaatggagt
actttgtttgttcctgggaaaacggaatttggtattgtaggaagtccaggttttatattt
ctcttttcattcttgggtgctgtgatacattttacatttgcggtatatataaatgctgta
cttcccggtaaatatggagtccgaaaggatccattatattttttgaagtgtttcaagaac
aataaaataatttttgatgaaaaagctggtgaatttgattatgataaggctaatgaagat
tttgaaccagtaatgagtgggacacttacacctggaatacaaatacgtgatcttaagaaa
tcttatacaacatgttggttacgaaaatctaaagttcatgctttaaaaggagtatccgtg
gacttttataaaggacaaattactgctctgcttggacacaatggggcaggcaaaactacg
cttatgtctatattaacaggtgtgataagcgaaacagaaggaaacgtttttataaatgat
aaaaatataaggattcacttggacagtattagaaataatttaggactatgccctcaggaa
aatatggtttttccagatttgaatgtatttgaacaaatagaattctttggcttgttgaaa
gctaaaaataaaaccagaaacgaaatcaaggaaaatgttaattccttgctttctaaatta
aaactttccgaaaagaaagattttctacctagcaaactttccggtggacaacaaaggaga
ctctgtctcgggatggcacttattggcgatgctaatattataattttggatgaaccaaca
tcaggaatggatcctgaaaccagaagagatacatgggatattatattaaaacttagagga
gagaaaacaatactaattagtacacataatatggaagaggctgatatacttggtgataga
attgcgataatgcatacaggtcatcttagaagttatggcactgcaatgtttttaaaaaaa
cagtatggtcacggccatatcgaagttacgttatcaacaaaatcttggtgtagtcctgaa
aaagtcataagtaaatttgatgatagaacacaacagcttagcgttgacagtgaaaagatt
gtattgaatgtaccatatactgactctttatcacaatcactagacaaagtagaaagcgaa
aagaaagaattaggagttactggaataagcgtatcattgattactttggaacaagtattt
ttgcagatcgtgaagaaggaagacagtgggacacaccttaatgaattatttactgcacca
ctacagaaaattacaggcagtgaactatgcatgcaatcaatatttgcattattttgcaag
aaatttgcatatacgagaaagaatctagttgacttactgttgattctacttcttcctatc
ttgtcggtgcttataatggccataagttacaatgtaccaagcgataatacaaatattgtt
cctttaaagcttgatatgtatagatatcctaaaactttatattcgtcgagcaacgaactg
attggtaagaaatacagagattttgttcagaattttggtgaagttaaacgtgtagcttcg
gatacaagtgttacaaatgctcttttgaattcttctatggagaacattgtggaatatcga
aataatcttatcgtatctgccgaatttaatggcactgaaggcaacacgacatgggctaac
ggtttttattctggcttagcaattcacagtgtgcccttaacagtgaatctcttaagtaat
gcgttcatgaaggatctcgctggcgatcaatattctattgctgtgtctaggcagcaatta
ccaaatacgttatcttcgaccatgatagtaccggaagcagaatcgatttcgcgcgttttg
atattctgttcgttcttctttcccactgtggcactttttgtagcgcatcccttgcaagaa
acagcgacaaaagtgaagcaactccaacgtatgaccggtatcacgtcgatatcatactgg
agtacaatgctcacttttgattttctgatatttacgttgtctgtattaataattacttca
gcgttgtatattatggatattatactcgatgttcgcctatattatggaacagagatattg
tgcacaatattgattctggaattgttcggtattaatgttttactttttgtgtatctattc
agctttatgaacaaatcaaggaatactgtaacaactattgtgggtattgcaccttttggc
tttgttgtaatacaatatcttctacatgaagtaatacacagttttgattaccttaatcca
ctacatattctacaaaagagaatcttccgtctaattccatatgtaagcttgttccacggt
caaatatctttcttaaacatagcagtgcaaaatgcaaggtgtcgtcgtctaccaaataca
cttcatgctgtagtttgttttgcagctaatgatccttgttgtggcttggattgcaaggac
ggatcgtgcaaaaatcaactttcttactttcgagactttacagaggatatgaatttcgaa
gaaagtatagtatatctggctttaacaccaattctatattttattctattaattgtattg
gaagaaaagctgttttcgaaattatttatgaagatagttggaacgaaactaagaaaggaa
caagacataatggatgatcaagtgaagaaggagaaacttacagtagcgatggaaattaat
aaaattaacaaccaaagtgcaggtggaaaatttacgaaagaagaaccaaaaacaaattcc
ccggagactactaatatcgaattgttacatagtccaataagtgacagcaacagtcttttc
ttagtatatgaattaagtaaatattatgggaagttaatggccgtaaaagaaatcagtttt
caagtaaaaccacgcgaatgtttcggtttacttggtgtaaatggcgccggaaagagtaca
actttcaggatactgactggtgaagaaatgtctaatagtggcctaatgtacttaagacaa
gcggaaatccattcagacaagacaaagtatctttctgaaatgggatattgtccacaaact
gatgctttaataccctccttaaacacttttgatcatttacgactgtttgctcgtcttcgc
ggtataccaaaatccaacgtagagttggaagttaataaatggattaatagactgaattta
actgcctgcatgaagcaaccaagcggtacttatagcggtggcaataaaagacgcttaaac
atcgcgatggctctcatcggtaatcctactctcgttcttttggatgagcccacaaccggt
gtcgatcccgcagctagaagatcgctttggaatactttgcaattatgtcaagcagcaggg
caagctattatactcacatctcacagcatggaagagtgtgaagcactttgcaatagatta
gttattatggtgaagggtgaattagtctgcattggtgcgagtcaagagttgaaacagcga
tttggcgcgggttacgatattcacgtaaaattaaatacaggccgaatggacgaggatgtt
aacgatattaagcaaattattgaatctagtctaacatgtgatattagagatgaaaacctg
ggtcttcttgcttatcatgtaacagattgtaatacaacatgggaaaaaatgtatgatata
atgaaaagtttgaagcaaagatataactgcattgaagattacgctgttttatctgcaact
ttggaacaactttttattcaatttgcaagaggaactgaaaaggttgaatctaacgagtct
gaacttcatatcactagtcctcaagaaaccgtataa
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