Solenopsis invicta (red fire ant): 105200514
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Entry
105200514 CDS
T03916
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105200514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200514
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105200514
U7-dependent histone pre-mRNA processing factors
105200514
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Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF8400
DUF908
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
105200514
NCBI-ProteinID:
XP_011166400
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All DBs
Position
6:complement(24982155..24986558)
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AA seq
477 aa
AA seq
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MSNSTISDQSLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQNTENPYGEAVQ
SDKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPHTAVSMLHKANPIPSVLTPSEKPIPQVQPRIEEPWAPRPPPPVNAPAPIFAGQDVD
LRLNRQINPRVAMDQDSRGSLDKEFKFDIQSVKTGQDIDLRLDRQIDPRVARMDQDLRGS
PQTQPAPVSAPSVMPATADPRGANAFNITDNILPVEGIESFYRDPRSDRFNRDSRELRDS
RIPIDPRITKSNPTPVAPPIVPRPVAAPTVPASSVVTNNTTGSSATVLSQPASSATTRLV
AGMSPAGNIPSGASDQEKAALIMQVLQLSDEQIAMLPPEQRQSILVLKEQIAKSTQR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcggatcaatcgctgatggacaagtcgatgcgaagtgtcttc
gtcgggaatatcccgtacgaggctacggaagagaatctgaaggatatcttcagcgaggtt
ggacctgtgctttcgtttaaattagtatttgatcgcgagacgggtaagcccaaaggatat
ggcttctgtgaatataaagatcaggaaacagctctaagtgccatgagaaatttaaatgga
tatgagattggtggacgaactttacgcgtggacaatgcttgcacagagaaaagtcgtatg
gagatgcaaagtctactacagggacagaatacagagaatccttatggagaagccgttcag
tcggataaggcgccagaggcaataagcaaagccgtggcgtctctgccaccggagcagatg
ttcgaactgatgaaacagatgaaactctgtgtgcaaaacaatccgaacgaggcgcgtcag
atgcttctgcagaatccacagctggcgtacgccctgcttcaagcacaagtggtcatgagg
atagtggatccacatacagctgtcagtatgttgcacaaggccaatcccattccgagtgta
ttaacgccgtccgagaagccgatcccgcaggtacagccgcgaatcgaggaaccatgggcg
ccacgacctccgccacctgtcaatgctccagcgcccattttcgcaggtcaggacgtagat
cttcgactgaacagacagataaatccgcgtgtagctatggatcaagattcgagaggatca
ctggacaaggaatttaaatttgacattcaatccgtaaaaacaggtcaggacatagatctc
cgactagacagacagatagatccgcgtgtagctagaatggatcaggacttgagaggatcg
ccacaaacgcagcccgcgccggttagtgcgccctcggtgatgccggctactgccgatcca
agaggggcaaacgcgtttaatattacggacaacattcttcctgtggaaggaatcgagagt
ttctatcgcgatccgaggtctgatagattcaacagagattcgagagaacttagagattcc
cggatacccatcgatcctaggattaccaaatctaatccgactccagttgcgccgccgatc
gttccgagaccggttgctgcaccaactgtgccagcatcaagtgttgtaactaacaataca
actggctcctctgcaaccgtgctttcgcagcccgcaagttctgcaactacgagactagtg
gccggaatgtctccagcgggaaatattcccagcggcgcatctgatcaggaaaaggcggct
ttaataatgcaagtgttgcaattgtcagacgagcaaattgcaatgcttccgcctgagcag
agacaaagtatcctagtactaaaggaacagattgcgaagagtacacaacgttag
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