Solenopsis invicta (red fire ant): 105200659
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Entry
105200659 CDS
T03916
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105200659
03015 mRNA surveillance pathway
105200659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200659
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105200659
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105200659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
105200659
NCBI-ProteinID:
XP_011166609
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All DBs
Position
15:complement(2918495..2923809)
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AA seq
481 aa
AA seq
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MASTKVDWGQYAEEQEKLASKVTNLSLDNSTTTSVPVPPVKDGDCKSDDDTSEEQISPAE
KSLLQKIIRKGLVETTKDIEIQRKDPNSPLYSVKTFDALHLKPALLKGVYAMGFNAPSRI
QETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNSNAEYPQVLCLSPTYELAIQT
GEVAAKMSRFCPEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWGQKFKFFDLSKISV
FVLDEADVMIATQGHQDQCIRIHKLLPPTCQMMFFSATYEPEVMNFAEIIVSNPLIIRLL
REEESLDNIKQYYIKCKDVDEKYTAITNIYGVITIGQAIIFCHTKKTASWLAEKMTKDGH
AVAILSGDLTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQRRQA
DCETYLHRIGRTGRFGKSGIAINLIDSSHAMQLCKDIEKHFGKKIHYLDAEDADEIEKIG
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactaaggtcgactgggggcaatacgccgaagagcaggaaaaattagcgtcg
aaggtgacgaatttgagtttggataattcaaccacaacgtccgttcccgtcccgcctgtg
aaggatggcgattgcaagagcgacgatgacacatctgaggaacagatctcgccagcggaa
aagtcgctcctgcaaaaaattataaggaaaggattagtcgaaacgacgaaagacattgaa
attcaaagaaaggacccgaattctccattatacagtgttaaaaccttcgacgccctccat
ctcaagcccgctttattaaaaggagtctatgccatgggattcaatgcaccatcgagaatt
caagaaactgctttacccactctacttgctgatccgccacagaatatgatcgcacaatct
cagtctggtacgggtaaaacagctgcgtttgtactcgcgatgttaagtcgggtaaattct
aatgccgagtacccgcaggtactttgtttgtcgccaacttacgagttggcgattcaaact
ggcgaggtagcggcaaagatgtcgcgcttctgtcctgaaataaagattaagtatgctgtg
agaggagaagaaataagccgtggatcgaaaattacggaacatattatcataggaacccca
ggcaaggtgttagattggggacaaaagttcaagttctttgatctaagcaaaatctcagtg
ttcgtgttggatgaagccgatgttatgattgcgacgcaaggtcatcaagatcagtgtatt
cgtattcacaaattactgccacctacatgtcagatgatgttcttctccgcgacgtatgag
ccggaagtgatgaattttgcagaaattatagtcagcaatccactaataatacggttatta
agggaagaagaaagtttagataatataaaacaatattatattaagtgcaaagatgtagat
gaaaaatacacagctatcaccaatatctacggcgtgattactattggacaagcaattatt
ttctgtcatacgaagaagacggctagttggttagcggaaaaaatgacgaaagatggacat
gccgtagcaatattgtctggtgatttgactgtggaacaaagaatttccgtactagataga
tttagagcaggacttgaaaaagttctcatcactacaaatgttttagctagaggtattgat
gtagaacaggtaactatagtggttaatttcgatttaccaatggatcagaggcgacaagcc
gactgcgagacgtatttacacagaattgggagaacgggacgattcggcaaatcaggaatt
gccattaatttaatcgattcgtcacacgcaatgcaattgtgtaaggacatagagaaacac
tttggtaaaaagattcattatcttgacgcggaagacgcggatgagattgagaaaatcgga
gcttaa
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