Solenopsis invicta (red fire ant): 105200862
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Entry
105200862 CDS
T03916
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105200862
03036 Chromosome and associated proteins [BR:
soc03036
]
105200862
Spliceosome [BR:
soc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105200862
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
105200862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
PIN
RRM_7
L27_1
Motif
Other DBs
NCBI-GeneID:
105200862
NCBI-ProteinID:
XP_011166940
LinkDB
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Position
2:complement(5812822..5816878)
Genome browser
AA seq
905 aa
AA seq
DB search
MDEEMDAVNEEASPGEVSNEEEMVMSETEEKADKEAAETESENEDDDDDDDNDEDVNEAE
VKALEASLSTNPYDYSSHVALINKLHTMGELDRLRTARNNMSNIYPLSPELWLAWLSDEI
NLATTDEQKAEIVRLCERATKDYVSVEVWLEYLQFSIGYMSKDEEGVEKVRQLFEHALTV
VGTHVTKGAIIWEAYREYENMIYISLLPLEDDTDNTRKKPQLERIVSLFKRQLSNPLLDM
DKTYEEYQSWCAKYGTEIEIDEKSISTCYKQGFAKLKSFLPYEEKLISAHGQSELLDAYK
GYLLYIKQNDPDLVTILYERAITDLSLETSIWLDYITYLENESRLERVLNPIYQRASKNI
PWCSTVWQKWIRSYECWDKHISEIQKILENALSVGFSTAEDYRNLWIIYLECLLRKLEQY
PDEEIEKHLDVIRKTFNRACEQLAKYFGLEGDPNCVILQYWARFETIHADNMEQTRRLWA
DILSQGHSATASYWMEYIVLEKSYGDSKHLRKLYQKALNATQDWPESIANSWIDFERDKG
TLEQMEFCEAKTKEKLDKVMIERQKTQQTISQSESSMQIKKANKRKVDDGRWKNLGGSPS
KIVKNDERTKPKLRPSILNIDSKTTNDQEKSKSEVVPPPGYKATEDKDKDNKDSQHEVDD
NITVFVSNLDYTTTEDDVRDVLKPVGPITLFRMITDYKGRSKGFCYVQLSSVEAVKEALK
LDRTPIKGRPMYVSKCDSNKSTRGPVFKYKCTLEKNKLFVKGLPLTTTKEELEEIFKIHG
DLKEVRLVTYRNGHSKGLAYVEYHDEATAAKALLNTDGMKIEDKVISVAISQPPDRKKTQ
MEENGGQTKSLGGTSTSRTAFGVPKTLLSMVPRNVKTSSSNGSAAPDKNTQMSNQDFRNM
FLNKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagatggatgctgtgaacgaggaagcttctccgggagaagtctcgaacgaa
gaagaaatggtaatgagtgaaacggaggagaaagccgacaaggaagcggcggagaccgag
tccgagaacgaagacgacgacgacgacgacgacaacgatgaggatgttaacgaagcggag
gtaaaagccctggaagcttccttgtcgacgaacccgtacgactattccagtcatgtggcc
ctgattaacaaattgcacacaatgggcgagctcgatcgtctgcgaaccgccaggaacaac
atgagcaacatatatccgctgagccccgagctctggctcgcgtggttaagtgacgagatc
aatttagcgaccaccgatgaacaaaaggctgaaatagttaggttatgcgagcgagctacc
aaggattatgtatctgtggaagtgtggttggagtatctgcagttcagcatcggatacatg
agtaaggatgaggaaggggtagagaaagttcgccaactctttgaacatgcactgactgtt
gttggaacacatgttacaaaaggagcaataatatgggaagcatatcgggaatacgaaaat
atgatatatatttctctattgccattggaagatgataccgataatacaagaaagaagcct
cagttggaacgcattgtcagtctattcaaacgtcaattatctaatcctcttttagatatg
gataaaacatatgaggaatatcaatcatggtgtgcaaaatatggtacagaaatagaaatt
gatgagaagtccatttcaacatgctataaacaaggctttgcaaaattaaagtcatttctt
ccctatgaagagaagcttatctctgcgcatggtcaaagtgaactgcttgacgcttacaaa
ggatatttactgtacataaaacagaatgatccagatcttgttacaattttgtatgaaaga
gcaataaccgatctgagcctagagacatcaatttggttggattatatcacttatctagaa
aatgaatcacgacttgagcgtgtattgaatccaatttatcaaagagcatcaaagaacatt
ccttggtgctcaacagtttggcaaaagtggataagatcgtatgagtgctgggacaaacac
atatcggaaatacaaaaaatattggagaatgctttgtccgttggtttttcaacggcggaa
gattatcgcaatctgtggattatatatctcgagtgtttgctgcgtaaactcgagcagtat
cccgatgaagagatcgagaaacatttagatgttattcgtaaaacgtttaacagagcgtgt
gagcagctggcaaaatattttggtctggaaggcgatcccaattgcgttatcttgcaatat
tgggcgagatttgaaacgatacacgcagataatatggaacaaactagaagattatgggct
gatattctttcacaggggcattctgcaacagcttcttactggatggaatatatagtgtta
gaaaaatcttatggagattcaaagcatctaagaaaactgtaccagaaagcattgaatgcc
acacaagattggccagaaagtatagcgaattcgtggatcgattttgagcgtgataaggga
actttggagcagatggagttctgtgaagcaaaaacaaaggagaagcttgataaagttatg
atagaaaggcaaaaaacacaacaaactatttctcagagtgagtcatccatgcaaattaag
aaagcaaataagagaaaagtggatgatggcaggtggaaaaatttaggaggttccccatcg
aaaatcgtcaaaaatgacgaacgaacgaaaccaaaattacgaccaagtatcttgaatatt
gacagtaaaacgacaaatgatcaggagaagtcgaaatcagaagttgtaccaccgcctggt
tataaagcgaccgaggataaagataaggataataaagatagccagcacgaggtagatgat
aatattacagtttttgtgagtaatttagattacacgacgaccgaagacgacgtaagagat
gttctaaaacctgttggaccgataacgttattcagaatgattacggattataagggacgc
agcaaaggattttgctatgtacaattgagtagtgtagaagctgtgaaagaagcgctaaag
ttagatagaacgcctataaaaggacgtcctatgtatgtttcaaaatgcgattctaacaag
agtactagaggtccagtatttaaatacaagtgtacacttgaaaagaacaaactcttcgtt
aaaggacttccacttacgacaacaaaagaagaattagaagagatatttaaaattcatggg
gatctgaaggaagttcgcctagttacttaccgtaatggtcactcgaagggcttggcttac
gttgagtatcacgacgaagctaccgctgcgaaagcccttttgaacacagatgggatgaag
attgaggacaaagtgattagcgttgcgataagtcaaccgcccgatcgtaagaaaacccaa
atggaagaaaatggaggacagacgaagtcactaggcggaacgtcgacgagtcgtacggca
tttggcgtgcctaagactttattgtctatggttccccgtaatgttaaaacgagtagcagt
aatggtagtgcagctccggataaaaatacacagatgagtaatcaggatttcaggaatatg
tttctcaataaaaaataa
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