Solenopsis invicta (red fire ant): 105200878
Help
Entry
105200878 CDS
T03916
Name
(RefSeq) heat shock factor protein isoform X2
KO
K09414
heat shock transcription factor 1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105200878
Transcription factors [BR:
soc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
105200878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
COG6_N
Motif
Other DBs
NCBI-GeneID:
105200878
NCBI-ProteinID:
XP_011166965
LinkDB
All DBs
Position
8:complement(10516230..10528027)
Genome browser
AA seq
626 aa
AA seq
DB search
MHTTSELDSNVPAFLAKLWKMVDDPKIDNLISWSPSGKSFFIRNQAKFATNLLPHYYKHS
NMASFIRQLNMYGFHKKVSVELGGLKCDKDEIEFAHQYFVKDQPHSIKHIKRKVATNKSQ
DPARPISAELVTKIFAEVRDMKGRHDHMDSTLNEIKQENSALWREIVMLRQKHLKQQQII
NKLIQFLVTLVQPSRSGISVKRRYPLMIDSSRSHKQSKLSKAQKSPTGPVIHELDASEPD
IDSDYLASEIIANEMPTVQSPQEHIETQIDDENTEIIYSVNEFVQNPKIEEETKKKRVCK
DKKKEELHVLEVSTDEDEPVTLSNKNTIHSKPIPMATVRSSKLAAMAANIKSQDIDTDID
TPGDLEDNMEALDNDASMVKLEDILIVPEMLNSSNIKNMMENEVNNSNLNKMNTNLNQMD
DGKNILMTNNNEEYNECRKIKSSNEGNNRYDSAGASSSNDLLVSRVNSSGKANANYREID
SRLDSMQTDLDKINNSLCEAFYGENCSIDANTLLQLFGDDNSLGYELSINPEFNSIQEDD
ETIIPDSINGSVGGELMAYNPSSNLPDFDIFMQNESDSNPSDLQINNLYTTDSLENSKDS
LFDAVNDDVNSKSHHLNLNRFIIMIM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaacatcggaattagattcgaacgtgcctgcgtttcttgccaaactttggaag
atggtcgacgatccgaaaatcgacaatcttatttcctggtcaccttctgggaaaagtttt
ttcattagaaatcaagcaaagtttgcaacaaatttattaccacattattacaaacatagt
aatatggccagtttcatacgacaactaaatatgtatggattccataagaaggtatctgta
gaattgggtggcctaaaatgtgacaaagatgaaatagagtttgcgcatcagtattttgtc
aaagatcagcctcactcgataaagcatattaaaagaaaagttgcgactaacaaaagtcaa
gatccagcgcgtcccatttctgcagaattagtgactaaaatatttgctgaagtaagagac
atgaaaggtcgtcacgatcatatggattctaccttaaatgaaataaaacaagaaaattca
gcattgtggagagaaatagtgatgttgagacaaaaacatttaaaacagcaacaaattatt
aataaattgattcaatttcttgttactcttgtacaaccatcaagaagtggtatatctgtt
aaaaggcgatacccattaatgatagactcaagtcgttcacataaacaaagtaaattgtcc
aaggcgcaaaagtctcctactggaccagtaattcatgaacttgatgcatcagaacccgat
atagattcagactacttagcttctgagattatagcaaatgaaatgccaactgttcaaagt
ccacaagaacatattgaaacacaaatagatgatgaaaatactgaaattatatattcagtt
aatgagtttgttcagaatcctaaaattgaagaagaaacaaaaaagaaacgtgtttgcaaa
gacaaaaagaaggaagaattgcatgtgcttgaagtgtctaccgacgaagatgagcctgtt
actttatctaataaaaatactatccattctaaaccaatacctatggcgactgtgcgtagt
tctaaacttgcagcgatggcagcaaacattaaatctcaagatattgacaccgatatagat
actccaggtgatctggaggataatatggaagctttggacaacgatgcgtcgatggtgaaa
ctggaagatatcctaattgtcccggaaatgctcaatagtagtaacattaaaaatatgatg
gagaatgaagttaataacagcaatcttaacaaaatgaatacaaatcttaatcaaatggat
gacgggaaaaatattttaatgacaaataacaatgaggaatacaatgaatgtagaaaaata
aaatcttcaaacgaaggaaataataggtatgatagcgcaggcgcgagttcatcaaatgat
ttattagtgagccgtgtcaattcttctggaaaggctaatgctaattacagagagatagac
agccgtttggattcgatgcaaaccgatttggacaaaattaataattctctttgtgaggca
ttctacggtgaaaattgcagcattgatgctaatactttacttcagttgtttggtgatgat
aattcactgggatacgaattatcaattaatccagaatttaattctatacaagaggatgat
gagactataattccagattctatcaatggatctgttggtggtgaacttatggcatataat
ccttcatctaatctaccagattttgatatatttatgcaaaatgagtctgattcaaatcca
tcagatttacagattaacaatctttatactacagattctttagagaattctaaggattca
cttttcgatgctgtgaatgatgacgtgaattcgaaatcgcatcatctgaatctaaatcgc
tttataataatgattatgtga
DBGET
integrated database retrieval system
