KEGG   Solenopsis invicta (red fire ant): 105200972
Entry
105200972         CDS       T03916                                 
Name
(RefSeq) protein suppressor of forked
  KO
K14408  cleavage stimulation factor subunit 3
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105200972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soc03019]
    105200972
Messenger RNA biogenesis [BR:soc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     105200972
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C NRDE-2
Other DBs
NCBI-GeneID: 105200972
NCBI-ProteinID: XP_011167084
LinkDB
Position
15:5520637..5527036
AA seq 714 aa
MTENKTEFDWGNEKLQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFDKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLTTYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVMFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMSFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDIRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSSLEPEKSV
DIWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTAME
LRSIGYMDVSSVARNSIGVVPRVPDPEEAIAALPRPDLSQMIPYKPKVNPLPGEHPVSGG
SFPLPPAAAQLCTILPPPGCFRGPFVAVDLLMDVFSRIQLPDHAPLPVADNGCDTKLFDL
AKSVHWIVDESNDGVSIGSKRRRTRLGGDDSEEEDLPPPPINDIYRQRQQKRVK
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgacggaaaacaaaacagaatttgactggggtaatgaaaaattacaacgtgctcagaag
actgtcgacgaatcaccatacgacttggaagcatggagtatacttataagggaagcacag
aacagaccaatcacagaagtgagaccagtattcgacaagctcgtttcagtatttccatca
gctggacgttattggaaaatttacatagaacaagagatgaaaatgcggaactttgaaaag
gtggaaaagcttttccaaaggtgcctcatgaaaatattaaatattgaattgtggaaacta
tatctttcttatgtcaaagaaacaaaagcgagtcttactacgtataaggagaaaatggca
caagcatatgacttcgcattggataaaattggcatggatattcactcttacagcatttgg
aatgattatgtcatgtttttgaaaagtgtcgaagcagtcggatcatacgcagaaaatcaa
aaaatcagtgctgtacgaaaggtttatcaacgaggagttattaaccccatgataaacatg
gagcaactgtggaaggattatatgtcgtttgagcagaacattaatccaataatcgcagaa
aaaatggctatagaaagatctagggactacatgaatgcaagacgcgtcgctaaagaattg
gaagcagttacgagaggtttgaatcggagtgcacccagcgtacctccaactggtcatccc
gaagaagttaaacaagtcgaattatggaagaaatatattgcttgggaacgaagtaatcct
ctaagaacagaagatacatcgctggttgctcgaagagtcatgttcgcgatcgaacagtgc
ctcttatgtttgggtcaccatccagcggtatggcaccaagcagcgcatttcttagagctg
agttctaagatattgacagagaaaggtgacgtgaatgcggctaagaatctcagtgacgag
gccgctaccatgttcgagagggcgacaagtacattgttgtcgaagaatatgttgttatat
tttgcgcacgcagacttcgaggagggtagagtgaaatacgagaaagtgcatcaaatatat
caaaaatttctcgatatacccgacatagatcctactttggcctacgtgcaatatatgaaa
tttgcaagaagagctgaaggtataaaatctgctaggacagtattcaaacgagcacgagaa
gacataagatgtaaacatcatgtttacgttgccgctgcattaatggagtactattgcact
aaagataaaaatatagcattccgtatttttgaattagggttaaagaaatttggagataat
cctgattatattctttgttacatagattacttgtcacatttaaacgaggataataataca
agagttctattcgagagagtattatcttctggctctagcttagaaccagaaaaatcagta
gatatatggaatcgtttcttggagttcgaatctaatattggcgatctagctagtatcgtc
aaagtcgagaagagacgaagtgcagtattggaaaagataaaagaattcgaaggaaaagag
actgcccagttagtagacagatataaatttttggatttgtatccatgtactgctatggaa
ctgagatcaattggatatatggacgtctctagtgttgctagaaattcgattggcgttgta
ccccgtgtacctgatccagaagaagcaattgcagctttgcccagacccgatttgtcgcaa
atgataccatataagccaaaagtaaatcctttgcctggtgaacatccggtatcaggcggt
tcattcccgttaccaccagctgcagctcaattgtgcaccatattgccgccacctggttgc
ttcagaggcccgtttgttgctgttgatttattgatggatgttttcagtagaattcaatta
cccgatcatgcaccgttgccagtggcggataacggatgcgataccaagttgttcgatctc
gcgaaatctgtgcattggatcgtcgacgagagtaatgatggcgtaagcatcggatcgaaa
cgtagacgaacgcgtttaggtggcgacgacagtgaggaggaagatttaccgcctccacct
ataaacgatatttatcgccaaagacaacagaaacgagtcaaatga

DBGET integrated database retrieval system