Solenopsis invicta (red fire ant): 105200972
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Entry
105200972 CDS
T03916
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105200972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105200972
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105200972
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GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
105200972
NCBI-ProteinID:
XP_011167084
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Position
15:5520637..5527036
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AA seq
714 aa
AA seq
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MTENKTEFDWGNEKLQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFDKLVSVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLTTYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVMFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMSFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDIRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSSLEPEKSV
DIWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTAME
LRSIGYMDVSSVARNSIGVVPRVPDPEEAIAALPRPDLSQMIPYKPKVNPLPGEHPVSGG
SFPLPPAAAQLCTILPPPGCFRGPFVAVDLLMDVFSRIQLPDHAPLPVADNGCDTKLFDL
AKSVHWIVDESNDGVSIGSKRRRTRLGGDDSEEEDLPPPPINDIYRQRQQKRVK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaacaaaacagaatttgactggggtaatgaaaaattacaacgtgctcagaag
actgtcgacgaatcaccatacgacttggaagcatggagtatacttataagggaagcacag
aacagaccaatcacagaagtgagaccagtattcgacaagctcgtttcagtatttccatca
gctggacgttattggaaaatttacatagaacaagagatgaaaatgcggaactttgaaaag
gtggaaaagcttttccaaaggtgcctcatgaaaatattaaatattgaattgtggaaacta
tatctttcttatgtcaaagaaacaaaagcgagtcttactacgtataaggagaaaatggca
caagcatatgacttcgcattggataaaattggcatggatattcactcttacagcatttgg
aatgattatgtcatgtttttgaaaagtgtcgaagcagtcggatcatacgcagaaaatcaa
aaaatcagtgctgtacgaaaggtttatcaacgaggagttattaaccccatgataaacatg
gagcaactgtggaaggattatatgtcgtttgagcagaacattaatccaataatcgcagaa
aaaatggctatagaaagatctagggactacatgaatgcaagacgcgtcgctaaagaattg
gaagcagttacgagaggtttgaatcggagtgcacccagcgtacctccaactggtcatccc
gaagaagttaaacaagtcgaattatggaagaaatatattgcttgggaacgaagtaatcct
ctaagaacagaagatacatcgctggttgctcgaagagtcatgttcgcgatcgaacagtgc
ctcttatgtttgggtcaccatccagcggtatggcaccaagcagcgcatttcttagagctg
agttctaagatattgacagagaaaggtgacgtgaatgcggctaagaatctcagtgacgag
gccgctaccatgttcgagagggcgacaagtacattgttgtcgaagaatatgttgttatat
tttgcgcacgcagacttcgaggagggtagagtgaaatacgagaaagtgcatcaaatatat
caaaaatttctcgatatacccgacatagatcctactttggcctacgtgcaatatatgaaa
tttgcaagaagagctgaaggtataaaatctgctaggacagtattcaaacgagcacgagaa
gacataagatgtaaacatcatgtttacgttgccgctgcattaatggagtactattgcact
aaagataaaaatatagcattccgtatttttgaattagggttaaagaaatttggagataat
cctgattatattctttgttacatagattacttgtcacatttaaacgaggataataataca
agagttctattcgagagagtattatcttctggctctagcttagaaccagaaaaatcagta
gatatatggaatcgtttcttggagttcgaatctaatattggcgatctagctagtatcgtc
aaagtcgagaagagacgaagtgcagtattggaaaagataaaagaattcgaaggaaaagag
actgcccagttagtagacagatataaatttttggatttgtatccatgtactgctatggaa
ctgagatcaattggatatatggacgtctctagtgttgctagaaattcgattggcgttgta
ccccgtgtacctgatccagaagaagcaattgcagctttgcccagacccgatttgtcgcaa
atgataccatataagccaaaagtaaatcctttgcctggtgaacatccggtatcaggcggt
tcattcccgttaccaccagctgcagctcaattgtgcaccatattgccgccacctggttgc
ttcagaggcccgtttgttgctgttgatttattgatggatgttttcagtagaattcaatta
cccgatcatgcaccgttgccagtggcggataacggatgcgataccaagttgttcgatctc
gcgaaatctgtgcattggatcgtcgacgagagtaatgatggcgtaagcatcggatcgaaa
cgtagacgaacgcgtttaggtggcgacgacagtgaggaggaagatttaccgcctccacct
ataaacgatatttatcgccaaagacaacagaaacgagtcaaatga
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