Solenopsis invicta (red fire ant): 105201025
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Entry
105201025 CDS
T03916
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03440
Homologous recombination
soc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105201025
03460 Fanconi anemia pathway
105201025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soc03032
]
105201025
03400 DNA repair and recombination proteins [BR:
soc03400
]
105201025
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105201025
DNA replication proteins [BR:
soc03032
]
Eukaryotic type
DNA Topoisomerases
105201025
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105201025
FA (Fanconi anemia) pathway
105201025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
HVO_2753_ZBP
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
105201025
NCBI-ProteinID:
XP_039307157
LinkDB
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Position
6:complement(6196935..6203774)
Genome browser
AA seq
1101 aa
AA seq
DB search
MALFKLCNIALNYTIFCGLRSTLSNLCSKKPAYTLYSLRRHCSNRIMKVLNVAEKHDAAK
NIAGYLSNGTSRKREGLSVYNKIFEFNVQLWGQNCQMVMTSVSGHLLGYDFTGAYRKWQG
CSPLSLFDAPVSKECLGENYEKIKRTLEREIRSCNTLIIWTDCDREGENIGFEIIQVCKA
VKSNIRVYRAKFSEITKQSIERALQTLGEPDKAISDAVDVRSELDLRIGAAFTRFQTLRL
QKIFPNTLGNLLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLRVIDDRDGISVEFRWA
RVRLFEKMPCQIFLDMCLERPDATVEKITCKPKSKWRPLPLDTIELEKQGSRKLRLNAKE
TMRIAERLYTQGFISYPRTETDIFPKEMNLTSLVQQQVPNRDWGDFARNLLESGVTPRQG
KKSDQAHPPIHPTKYTDSLQGNEAKVYEFVVRHFLACLSKNAEGRETTVDINIANERFTA
NGLEIIAKNYLEVYIYEKWNNKQIHSYQQRQVFRPTSIEMIEEKTSPPKLLTEAELIALM
DKHGIGTDATHAEHIDTIKSRQYVGLTNTQHFMPGKLGIGLVMGYDNMGFQMSKPHLRAD
LEKDLQLICQRQKNPNEVLQNQINKYREVFEVAIERANLIDESLAQYLDERPLQTEQIAP
LLPPQQVAIFKCPKCGSNMTLQNRRQGGGKFISCMGYPTCKNVVWFPEAIKDIEVLNETC
TQCTENMRKLKFTLVRNVIPLYGTSYTTCISCDTQFNEMLNIKEDCIKQTGRINNTGRNN
TRDTPSFTSTSSTSQSRSGQSAPNNTWASSSGSSSIGVRSNNNYGSIGTSSTSTERIQSQ
TLNVSQSNRSNRPNAIDRNTISSNSENHTSWIRSNDFNSLGNRSNQSESRNVPSANNATN
WGNIDNNTEIMCNCHEIAIQLTVKKEGPNKGRLFYKCAKPQGSGCNFFLWGSDSVESRDN
VANEHSSWTSSFDRNNDNAGHSSRAGTSNNNWGNPSTNDVMCQCNEPARKLTVHKDGPNK
GRQFYGCPKGMNSTCKFFKWADDDDVDHENMDWNTSTARGRGNTAHNRHNAPKRPRPTGG
KRKCGNCGMEGHTKRKCPETQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccctttttaaattgtgtaatatcgcattgaattatacgatattttgcggtttgaga
agtacacttagcaacttgtgtagcaagaaacctgcatataccctttactcgttgagacga
cactgttcaaatcgcatcatgaaggttctcaatgttgccgagaagcatgatgcggctaag
aatattgctggttatttgtcgaatggtaccagcaggaagagagaaggtttatctgtgtac
aacaagattttcgaatttaatgtgcaactatggggtcaaaactgccaaatggtgatgacg
tctgtgtcagggcatttattaggctatgattttactggagcttatcgcaagtggcaagga
tgtagtccattgagtttatttgatgcccctgtgtctaaggaatgtttgggtgaaaattat
gaaaagatcaagagaactttggagcgagagatacgatcctgcaacacattgattatttgg
acagattgtgatagagagggggagaacataggttttgaaattattcaggtttgcaaggca
gtcaaatctaatatccgtgtatatagagcaaaattctcagaaattacaaaacagtctatt
gaaagagctctgcaaactttgggagaaccagataaggcaataagtgatgctgtagatgta
aggagcgaattagatttacgaattggcgctgcgtttacaaggtttcagactttaagatta
cagaagatatttcccaacactcttggaaatttgctcatcagttacggaagctgtcagttt
ccaacgcttggatttgtagtcgagagatttttagctattgatcgattcaagtccgaaccg
tactggaagcttagagtaatcgatgatcgcgatgggatatccgttgagttcagatgggct
agggtaagactgtttgaaaaaatgccttgccagatctttttggacatgtgtttggaacgg
ccagatgcgacagtagaaaagataacgtgcaagccaaaaagcaaatggagacctctacct
ctggatactattgaattagagaagcaaggctctcgtaagttgcgcctaaacgcgaaggag
acgatgaggatagcggaaagattgtacactcaaggtttcattagttacccacgcacagaa
acggatatattcccaaaggaaatgaatttaacgtctttagtacagcaacaagtgcccaat
cgagactggggtgactttgcgcgaaatttactagaatcaggagtaactcccaggcaagga
aagaaaagcgatcaagcgcatcctcctattcatcctacaaagtataccgacagtttgcaa
ggaaacgaagcgaaggtctatgaatttgtcgttcgacattttctggcttgtctgtcgaag
aatgcggagggtcgagaaacaacagtggacatcaacatagcaaacgaaagatttacggct
aacggtctcgaaattatagcaaagaattatctcgaggtgtatatatatgagaaatggaac
aacaaacagattcattcttaccaacagaggcaggttttccgaccaactagcattgaaatg
atagaagagaagacttcgccaccgaaattattaaccgaggctgagttgatcgcgttgatg
gacaagcatggcattggtacagacgccacccacgccgagcacatcgatactatcaaatcc
agacaatacgtgggcttaacgaacactcaacatttcatgccaggcaaattggggattggt
ctggttatgggttatgacaatatgggtttccaaatgtccaagccacatttgcgcgcggat
ttagaaaaagatttacaactgatatgccagcgtcagaaaaacccgaatgaagtattacaa
aatcaaattaataaatatcgcgaggtgtttgaagtggcgatagaacgtgccaatctgata
gatgaatctttggcacaatatctggacgagagacctctccaaaccgagcaaattgcccct
ttactccctccacaacaagttgctatattcaagtgcccaaaatgcggttccaatatgact
ctacaaaacagacgacagggcggaggaaaattcattagctgcatgggctatccaacatgt
aaaaatgtagtttggttcccagaggccataaaagatatagaagttttgaacgagacatgt
actcagtgtacagaaaatatgcgcaaattaaagtttacattagtcaggaatgtgataccc
ttatatggtacttcttacacgacatgtataagctgtgatacccaattcaacgaaatgttg
aacattaaggaggattgcattaaacaaacgggaagaataaataatacaggtcgcaataat
acgagggatacaccaagcttcacttctacctcgagtacatctcaatccagaagtggtcaa
tcagctcctaataatacatgggctagcagttcaggatctagtagtataggggtccgaagt
aacaacaattatggttcgattggaacgtctagcacatccacagaacgcatacagagccaa
actttaaatgtttctcagtcaaacagatcgaataggccaaatgctattgatagaaataca
atatcaagcaacagcgaaaatcatacttcctggattcgttcaaatgatttcaatagttta
ggaaatagatcgaatcaatctgagtccagaaatgttcccagcgcgaacaatgcaactaat
tggggtaacattgacaataacactgaaattatgtgtaattgtcatgagattgcgatccag
ttaacagttaagaaagagggaccaaataaaggacgtctgttttacaaatgtgctaaaccg
caaggtagcggttgcaactttttcttatggggatctgacagcgtcgaatctcgagataat
gtagcgaacgaacattcaagttggacatctagctttgatagaaacaatgataatgctggt
cattcttctcgtgctggcacttcgaataataattggggaaacccatccacgaatgatgtt
atgtgccaatgtaatgagcctgctcgaaagctgacggttcataaagatgggcccaataag
ggacgacagttttacggatgtcccaaaggtatgaattccacttgtaagtttttcaaatgg
gcagatgatgatgacgtcgatcacgagaacatggactggaacacttccactgcaagagga
agaggaaacacagcacataacagacacaatgctccaaaaagacctagacctactggaggc
aagagaaaatgtggaaattgcggaatggaaggtcatacaaagaggaaatgtccagaaaca
caataa
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