Solenopsis invicta (red fire ant): 105201061
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Entry
105201061 CDS
T03916
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105201061
Membrane trafficking [BR:
soc04131
]
Protein recycling
Others
EARP complex
105201061
Endosome - Golgi transport
Tethering complex
GARP complex
105201061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Baculo_PEP_C
COG2_N
CoV_NSP7
INTS5_N
DUF5740
Erythrovirus_X
VPS51_Exo84_N
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
105201061
NCBI-ProteinID:
XP_011167221
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All DBs
Position
6:6216268..6220805
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AA seq
665 aa
AA seq
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MAEIDIFDNEEQLPQDLGDDVVQEVLKTGTDLRQYSRQIEKELKEVENKSIQDYIKESEN
IASLHNQIAACDNILEKMESMLMNFQSALGNISSEILSLQRKSVAMSQQLSNRQIIRGPL
SQFIEDMTVSEALIAGIMDCPVTEKEFLIHLQTLNHKINFVKEQSFKEAKSCLDVKDILE
KLKVKAMAKIRTYLLEQIYKFRKPMTNYQVPQNNMLKYKFFFEFILANERNVAEEICGEY
IDTMSKIYYSYFKSYSSRLMKLQFEERTSKDDLMGVEDTANRSIFHKTTLKHKGTVFSID
TRGQVLSSHLEAPIIIPHAASKTRYHYEALFRSEQYAVADNACREYLFLIEFFKVRNAQA
LDIFNQVMGKTLSLMTKNLQSFVEDCYDTIGLFLCLHLVMRYQLICHKRAVPALDKYWEA
LTATIWPRFEFVFQLNINSVKDCDPSKFNKETGPHYITRRYAEFSAAIVGVVEGFPCEGT
TQLLAELRETVQCFLLRMASIFPSRTQQLVFLINNYDLVLRVLMERTRETSKEAESFREL
LNARSSEFVEEILSPHFGSIIQLIKESEALIEKGQADDLKRQEGKALVLVQSFTNNWKRA
LEEINREVLKSFPSLVLGSTLVQCAMTQLVQYYHRLHKILPQNARTQLTNIHHIMVEIKK
YKTNY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatagatatttttgacaatgaggagcaattgccgcaggacctcggcgacgat
gtcgtgcaggaggttctcaagactggcaccgacctgcgccagtactccaggcagatcgag
aaggagctcaaggaggtcgaaaacaaatcgatccaagattacatcaaggagagcgaaaat
atagccagtctgcacaatcagattgccgcttgcgacaatattctggagaaaatggagtca
atgctgatgaactttcagtcagcgctgggaaatatcagttctgagatacttagcttgcaa
cgtaagtctgttgctatgagccaacagctgtccaatagacaaataattcgaggtccactt
agtcaatttatcgaagacatgactgtgtctgaggctctaattgctggtattatggactgt
ccagtgactgagaaggaattcctgattcatttgcaaactctcaatcataaaatcaacttt
gtaaaggaacaaagtttcaaggaggcaaaatcttgtttagatgtgaaggatatacttgag
aagctaaaggtgaaggcaatggcaaaaatcaggacatatttactggagcaaatttataaa
tttaggaagccaatgacgaattatcaagtgccacaaaataatatgctaaaatacaaattc
ttctttgagtttatattagcgaatgagagaaatgtagctgaggaaatttgtggagagtac
attgacactatgagtaaaatatattactcatatttcaagtcctattcatcaagattgatg
aaattacagtttgaagagagaacgtcaaaggacgatttaatgggagttgaagacacagcg
aacagaagtatatttcataaaacgacgttaaaacacaaaggtactgtcttttctatagac
acaaggggtcaggttttgtcttctcatttggaggcgcctataattattccacatgctgcc
tctaaaacacggtatcattatgaagccctattcagaagtgaacaatatgctgtggctgat
aatgcctgcagagaatatctgttcttgatagaatttttcaaggtccgtaatgcacaggcg
ttagatattttcaatcaggttatgggaaaaactttgagccttatgacaaagaatttgcaa
tcattcgttgaagattgttatgatacaattggtctatttctctgcctacatttggtgatg
cgttatcagttgatatgtcacaaaagagctgtaccagcattggataaatactgggaggcc
ttgacagctacaatttggcctagatttgaatttgtgtttcaattaaacataaacagtgta
aaggattgtgatccatcgaaattcaacaaagagactggtccacattatattaccagaaga
tacgcggaatttagcgcagcaattgtaggtgtagttgaaggatttccttgtgaagggaca
actcaattattggcagaattgagagaaactgtacaatgcttcctgttaagaatggcatct
atttttccaagccggacgcagcaattagtatttcttatcaataattatgatctggtactc
agggtattaatggaaagaacgcgagaaacttcgaaggaagcggagagttttcgggaactg
ttaaatgcgcgttcctccgaatttgtcgaagaaatcttaagcccgcattttggtagtata
attcaattgataaaggagtcggaggccttgattgagaagggccaggccgatgatttgaaa
cgacaggagggcaaagcattggtcttagtgcaatctttcacgaacaattggaagcgggcg
ttagaggaaataaatcgggaggtgttgaaatcatttcccagcctggtgctcggcagcacg
ctagtgcaatgcgcgatgacgcagttggtgcaatattatcatcgtcttcacaagatcttg
ccgcagaacgcgcgcacgcaacttacgaacatccatcacataatggtagaaattaagaag
tacaagacgaattattag
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