Solenopsis invicta (red fire ant): 105201097
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Entry
105201097 CDS
T03916
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105201097
03036 Chromosome and associated proteins [BR:
soc03036
]
105201097
Transcription factors [BR:
soc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105201097
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105201097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
GRAM
Motif
Other DBs
NCBI-GeneID:
105201097
NCBI-ProteinID:
XP_011167269
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Position
14:12950283..12953721
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AA seq
751 aa
AA seq
DB search
MDFLEYSDICAEVKGAMTPGRLKLTDQHLIFKNQKTGKVEQISASDMEMVNYQKFIGTWG
LRIFLKNGTLHRFKGFKESDQEKIAKFFSVNYKKDMLEKELSLKGWNWGTAKFNGSVLSF
DVGHHTAFEIPLYDVSQCNTGKNEVTLEFHQNDDAPVSLMEMRFHIPVSDTGDQDSVEAF
HQQVMDKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQTFFQLHGKTFDYKIPMSTVLR
LFLLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTEKELKEKYEDK
LSKEISGPTYEVLGKVMKVIINRKLTGPGHFTGHTGTHSIGCSFKAAAGYLYPLERGFIY
VHKPPIHIRFEEIASVNFARGGGSTRSFDFEIKLTSGVEYTFSSIEKEEYGKLFDFITAK
KLRVKNRGKSDKPNYDADFGDSDQEDEPDAYLARVKAEAQERDGDENQDSEEGSTDEDFN
PNQDESDVAEEYDSNPNSSDSDSDASAASHKKEKKEKKSKSAKTVSEKPRKQRKPKKERD
ADKPKRPPTAFMLWLNNTRDSIKAENPKLAVTEIAKKGGEMWRELKDKSEWEAKAAKAKK
EYDALMKEYKASGGGKTKETKDTKEKKTERKKKETKKETKKDSPSKQMTGSSFKSKEYIS
DDDSSSDESKKSLKKGSDDESEEEKDKKKSAKKRSDNESEDEKDRKKKTEKRPAEDTKKA
KKMKREQSDESDEEEPVESTPSSSDAESKSD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttgagtattcggacatctgcgctgaggttaagggcgctatgacgccaggc
aggttgaagctgaccgatcagcacttgatattcaagaatcagaagactgggaaggtcgag
cagatctccgcgtccgatatggagatggtgaactatcagaagtttattggcacctggggc
ctacgtatctttctgaaaaatggtactttgcatcgtttcaaaggcttcaaggaatctgat
caggagaaaatcgccaaattcttttctgtcaactataagaaggacatgcttgagaaggag
ctgagtttgaagggctggaactggggcactgcaaagtttaatggatctgtcttgagtttt
gacgtcggtcatcacactgctttcgagatacccctgtacgatgtgtcccagtgtaacaca
ggaaagaacgaggtgacgttggagttccatcagaacgacgacgctccggttagcctgatg
gagatgagatttcacattcctgttagcgacaccggcgatcaagattctgtcgaagcgttc
catcagcaggtgatggataaggcatctgtgatcagtgtgagcggcgacgcgattgccata
ttcagggaaattcactgtctaacgccacgtggccgttatgacatcaagattttccagacc
ttcttccaattgcatggcaagacctttgactacaagatacccatgtccactgtattgaga
ctttttttacttccgcacaaagataatcggcaaatgttctttgttgtgagcctggatcct
cctataaagcaaggtcaaacacgatatcattatttggtactcctgttcaatcaggaagag
gagacttctatcgagttaccgtttaccgagaaagaattgaaggaaaaatatgaagataaa
ctgtctaaagaaatatcgggaccaacatatgaagtactcgggaaggtgatgaaggtaatt
atcaaccgaaagttgaccggtccgggacatttcactggtcacaccggaacacactctatt
ggctgctccttcaaagctgctgcaggatacctgtatcctcttgagcgaggtttcatctac
gtacacaaacctccaatacatattcgtttcgaagagatagcttctgtaaactttgcgcgc
ggcggtggctcgactagatctttcgactttgagatcaagcttacaagcggtgtggaatac
acgtttagcagtattgagaaagaagagtatgggaaactgttcgacttcatcacggcaaag
aaattgcgcgtcaaaaaccgtggcaagagtgacaagcccaattatgacgcagacttcggt
gacagcgatcaggaggacgaaccggacgcttacttggcgcgggttaaggcagaggcgcag
gaacgggacggtgatgaaaatcaagactccgaagaaggctcaaccgatgaggatttcaat
ccgaatcaagatgagagtgatgtcgccgaagaatacgacagcaatcccaatagttctgac
agtgattcagatgcatctgcggctagtcacaaaaaggagaagaaggaaaagaaatccaag
tcagcaaaaacggtgtcggaaaaaccgcggaagcagaggaaaccgaagaaagaaagagac
gcggacaagcccaagagaccaccgacggcgtttatgctgtggctgaataacacacgcgac
agtatcaaggcagaaaatccgaaattagctgtgacggaaatcgcgaaaaagggaggcgag
atgtggcgagagcttaaagataagtctgaatgggaagcaaaggcggccaaggctaagaaa
gagtacgatgcgttgatgaaagaatacaaagcgagcggtggtggtaaaactaaagaaact
aaagatactaaagaaaagaagacagagaggaagaagaaggaaacgaagaaggaaacgaag
aaagactcgcctagcaagcaaatgactggctcctctttcaagagcaaagagtatattagc
gatgacgacagtagcagcgacgaaagcaagaagtccttaaagaaaggctccgatgatgaa
agtgaggaggagaaggataaaaagaaatctgcaaagaaacgctctgacaacgagagcgag
gatgagaaagatagaaagaagaaaactgaaaagaggccagcggaagatacaaaaaaggcg
aaaaagatgaaacgagaacaatcggatgaaagcgacgaggaagaacctgtagagagtact
ccatcctcgtctgatgcagaatctaaaagtgattaa
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