KEGG   Solenopsis invicta (red fire ant): 105201218
Entry
105201218         CDS       T03916                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105201218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    105201218
   04121 Ubiquitin system [BR:soc04121]
    105201218
Spliceosome [BR:soc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    105201218
Ubiquitin system [BR:soc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105201218
SSDB
Motif
Pfam: SART-1 HIND DUF4410
Other DBs
NCBI-GeneID: 105201218
NCBI-ProteinID: XP_011167465
LinkDB
Position
1:complement(17736506..17742648)
AA seq 746 aa
MGSNKRHKTEKSRDAKKKRHRSRSRSYTPDREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQRSPSPVKGGTSQASLSIEETNKLRAKLGLKPLEVDNT
PKDDSSKIKDDLGEFYHKPAPNNSDKIKAQKLREKIGTQKEKRQIEANLSKMKTLGECDS
DDDTQAWINRSRQLEEEKKKAEMRAKMLDQLDEEFGIGNLVKEDMHTTRNTAYTGKDLKG
LKVEHNIESFEEGNTVILTLKDQEVLNESGDSLVNVNMIDNERYKRSVINKLKKPTYDPY
ADENLDEYGFPKNKILEKYDEEIDGEKKDNFVLGTNNAVEFKRRQTETVKQRLANKKLET
LQIAEPKLASEYYNEEELAKFKKPKKKIRKIRTKKKLKADDLVPVDNDYLRDLGSRRRKK
PEDSKDNDTLDVDDLEAPQEDLAGIKLEEDDKELELQLALKKTRRLKEEHSSSIQKTVET
IKQEILNSEENQSGNIVLNSTAEFCRTLGDIPTYGLAGNREENGQELMDFEMDGIKDEPP
VNEEEDDGRGAWNTVHLDENTSEPVVMEAAILDAEPSLGQGVGGALKLAMSKGYLQKEDS
NRPSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSDFKEKDGFKPNVKLEYIDDD
GHVLCAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQ
KETQSPYIVLSGSKQMQTTSIAKTKH
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgggttccaacaaacgtcacaaaaccgaaaagtctcgcgatgccaagaagaagcgtcat
cgcagtcgctccagaagttacactcccgaccgcgaaaaatcagagaagcatagacatcat
aagaaacatcgaaggaaagagcgcaaagattacgacagcgatgttgagatcgttaatgct
ccgccaccaccaaaaatatcaaagtcgtcacatccgtcgacgcctccgccacctgaaatc
tctaagcagcgcagcccatctcctgtcaaaggtggaacgtcgcaagcgtctttatcaatt
gaagaaactaacaagcttcgcgcaaagttagggttgaaaccattggaagtggataataca
ccgaaagatgattctagcaaaattaaagatgatttgggcgagttttatcacaaacctgca
ccaaataatagtgataaaataaaggcgcagaagctgagagaaaagataggtactcaaaag
gaaaagagacagattgaggcaaatttatcaaaaatgaaaactttgggtgaatgtgattcg
gatgatgacacccaagcatggatcaacagatctagacagctagaagaagagaagaagaaa
gcagaaatgagagcaaaaatgttggatcaattggatgaagagtttggaattggtaatttg
gttaaagaggacatgcatactactcgtaataccgcatatacagggaaagatttaaaaggc
cttaaagttgaacacaatattgaatcgtttgaggaaggcaatacagtaattttaacattg
aaagatcaagaagtattaaatgaaagtggtgattcacttgtaaatgtgaatatgattgac
aatgaacgttacaagcgtagtgttataaataagcttaagaaacctacgtatgatccatat
gccgatgaaaatttggacgaatatggattccctaaaaataagattttagaaaagtacgac
gaggaaattgatggtgagaaaaaagacaattttgtgctgggcactaataatgcggtcgaa
tttaaacgacgtcagacagagacagtgaagcaacgcttagcaaataaaaaattggaaacg
ctacaaatcgcagagccaaaattagcaagtgaatattataatgaagaggaacttgcaaaa
ttcaagaaaccaaagaagaagattcggaaaattagaacaaaaaagaaactgaaggctgat
gatctggttcctgtggataatgattatcttagagatcttggaagcagaagaagaaaaaaa
ccagaagattcaaaggataatgatactttagatgtcgacgatttagaagctccacaggaa
gatcttgccgggataaaacttgaagaagacgataaagaattagagttacagttggcttta
aagaaaactcgacgtttgaaggaggaacattcatctagcattcaaaaaactgttgaaaca
ataaagcaggaaattcttaactccgaggaaaatcaatctggaaatatcgttcttaattct
actgcagaattttgtagaaccttgggtgatatacctacttatgggctcgctggaaataga
gaggaaaatggacaagaactcatggattttgaaatggacggaattaaagatgagccacct
gtaaacgaagaagaggacgatggtcgtggtgcttggaacacagtgcatttagatgagaac
acttcggaaccagttgtaatggaggcggcaattctagacgccgagccctcactcggtcaa
ggggtaggtggagctttaaagttagctatgagtaaaggttacttgcagaaagaggacagc
aatcgcccttcggcgtcacgattcgcacatctgcaagctcagaactattcaatagaggac
aaaacatacggagatgatgacaagttcggcagaagagatcgctttaacggaccgacgtcc
gattttaaggaaaaggatggttttaaaccgaatgttaaacttgaatatattgatgatgat
ggacacgtcttgtgtgccaaggaagcttttcgatatttgtcgcataagtttcatgggaaa
ggtccaggaaaaaataaggtggagaaaagaatgaagaaagccgaacaagaagttttaatg
aaacgaatgtcttcaacagatacacctctaggtacattgaatttattgcaagctaaacaa
aaggaaacacaatcaccatatatagtgctcagcggcagtaagcagatgcaaacgactagc
atagctaaaacaaaacattaa

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