Solenopsis invicta (red fire ant): 105201237
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Entry
105201237 CDS
T03916
Name
(RefSeq) transcription factor SOX-9 isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105201237
Transcription factors [BR:
soc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105201237
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Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105201237
NCBI-ProteinID:
XP_025991181
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Position
6:complement(6150587..6170388)
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AA seq
436 aa
AA seq
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MKMNDVKPESSGASISPAGGNNNNNNNNNNSINGNGKASATAAAAAAAAAATVAANGGEG
ISAAVAKVLQGYDWTLVPVATKGSGDKRAAHVKRPMNAFMVWAQAARRKLADQYPQLHNA
ELSKTLGKLWRLLSDNDKKPFIEEADRLRVIHKREHPDYKYQPRRRKQNGPTSGRESSPT
RSQSNVTFSVTRSLKQEDMSPRGVQGPNSPQSGVSSSPPTTPSQGLSPPTPPTTPRGQHY
VNQSNQLPQNNTVYYQELVNGTPSSESSHQQPAVDLRYIEVGDGLPGEENQLNGLGTLGG
LGLNLPVNFQEYEVENNELDQYLPPQTTPIHQYPPVQVTTASQWLLNRYEEEVERPIKRH
CAEQAIAEVSSWEDRTQEMVRYHELQPPLPPVQYISAHNAHHSHASTQMGHPHVSTPYAQ
YAHRYVSGIETWQNYM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaacgacgtcaagccggagagcagcggcgcgtcgatttcgccggcgggcgga
aacaataataataataacaataacaacaacagcatcaacggtaacgggaaagcgtcggcg
acggccgccgccgccgctgccgcggccgccgcgacggtggccgccaatggcggcgagggg
atcagcgccgccgtcgccaaggttctccaaggatacgactggaccctggtacccgttgct
accaagggctccggcgacaaaagggcggcccacgtcaagaggcccatgaacgcgtttatg
gtgtgggcccaggctgcgaggcgaaaactggccgatcagtaccctcagcttcacaatgcc
gagctgtcgaaaacactgggaaagttatggcggctcttgtccgacaatgacaagaaaccc
ttcattgaggaggccgaccgtctgcgcgttatccataagcgcgagcaccccgattacaag
tatcaaccccgacgtcggaagcagaacggaccgacttctggccgcgagagttcgcccacg
aggagtcagagcaacgtgacgttcagcgttaccaggtcattgaagcaggaggatatgagt
cctagaggcgttcagggacccaactcaccgcagagcggcgtgagctcttcgccacccacg
acacccagtcagggtctctcaccaccgacaccccctacgacacccaggggacaacactac
gtcaatcagagcaatcagcttccgcagaacaacacggtgtactatcaggagttggtcaac
ggcacgccgtcgagcgagtcctcgcatcagcagccggcggtcgatcttcggtatatcgag
gtcggtgacggcctacccggcgaggagaaccagttgaacggcctcggcactttgggcggg
ctcggcctgaatctcccggtgaatttccaggagtacgaggtcgagaacaacgagctcgac
caatatttaccgccccagaccacgccgatacatcagtacccgcccgtgcaagtcaccacc
gcctcgcaatggttactcaacagatacgaggaggaggtcgagagacccatcaagcgccac
tgcgcggagcaggcgatcgcggaggtgtcgtcatgggaggacaggactcaggagatggtc
aggtaccacgagctgcagcctccccttccgccggtccagtacatatccgcccataacgcg
caccactcgcacgcgagtacgcagatgggccatccgcacgtgtccacgccctacgcacaa
tacgcacatcgctatgtgtccggcatcgagacgtggcagaattatatgtag
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