Solenopsis invicta (red fire ant): 105201276
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Entry
105201276 CDS
T03916
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04137
Mitophagy - animal
soc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105201276
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105201276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soc04121
]
105201276
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
105201276
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105201276
Multi subunit type E3
ERAD complex
105201276
LMBR1L-GP78-UBAC2 complex
105201276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
CUE
zf-ANAPC11
zf-RING_5
zf-RING_16
Fapy_DNA_glyco
G2BR
Prok-RING_4
zf-RING_Vps41
DYF4_N
FAR1_N
LPD39
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
105201276
NCBI-ProteinID:
XP_011167530
LinkDB
All DBs
Position
8:complement(240471..258421)
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AA seq
605 aa
AA seq
DB search
MPMEFLERLPIPNLRLYTAISFTGLSCSLYYASQIIKDPAWRTNHTHVDVATQSGNDIDL
SDPRSFGTHLKELLECMVVEPVCVWTLMNMAYCMLILLGKTIQKLVFGELRASESQHLKD
KFWNFIFYKFIFVFGVLNVQYMDEVVLWWAWFMALGFLSLLSQLCKDRFEYLSFSPTTPG
WSHARLLGLLAAILVLSFFMLLFCIAAAFFFISFNIFAFMAAECILLGVRTIHVMLRYVI
HLYDTRGAGTSAQRSWDKRGPLTYYTDLISELIVLAVDFFHHVHMLLWSNIFLSMASLVI
CMQLRYLFYEIQRRITKHRNYLAVLNHMEQNYPMASQDELAENSDNCAICWEKMESARKL
PCTHLFHNSCLQSWLEQDTSCPTCRLGLSMQANHRENTPEMPPEPQTPTRRNGNHFFLFL
DASRYVSWLPSFSVEVSHNRLRGNISTLAHTNSQMDAMARQVQLLFPHYSRNVILEDLRM
TRSVEWTIENILDGVLTIPHHLIEEPQEESVPQMQSTMTNMPSSSIQNPSDPRFDIPFAD
SGEEPSSLGGRFSKSSAERELILQRRKEHMRLTARRRYLERHRKMEIDSTNSQITNIEDT
ENIAS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggaatttttggaacggttaccgattccgaatcttcggttgtataccgccata
agcttcaccggactgtcttgttcgctatactatgcctctcaaataatcaaggaccctgct
tggagaacgaatcacacgcacgttgatgtggcaacccaatctggaaacgatatcgatctg
tctgatccgagaagttttggcacgcatcttaaagaactcttggaatgtatggtggtagaa
cctgtttgtgtctggactttaatgaacatggcatactgcatgttgattcttcttggtaaa
accatccaaaagcttgtatttggtgagctgcgtgcctcagaaagtcaacatttgaaagac
aagttttggaattttattttttataaatttatcttcgtttttggagttttaaacgtacaa
tacatggacgaagttgtactctggtgggcatggtttatggcactcggctttctgagtctt
ctcagtcaactttgcaaagatcgatttgaatacctgtccttttcacccaccacgccagga
tggagtcatgcgcgacttctcggattgttggccgcaattcttgtgctatcctttttcatg
ctcttattctgcatcgctgcagctttcttcttcatatcttttaatatttttgcttttatg
gcagctgagtgtattttactcggagtccgtacgattcacgtcatgttgcgttacgtgata
catctatatgatactcgtggcgctggtacttctgcacaacgttcttgggataaacgtggt
cccttgacctactatacggatttgatatcggaattaattgtattggcagttgattttttt
catcatgttcacatgcttctatggagtaacatatttttgagcatggcatcgctagtgata
tgtatgcaactgagatatctgttttatgaaatacaacggaggatcacgaaacacagaaat
tatttggctgtactaaatcatatggaacaaaattatccaatggcttcgcaagatgagtta
gcagagaactctgataactgcgcaatatgttgggagaagatggaaagcgctcgtaaatta
ccctgtacgcatttgtttcataattcgtgtttacaatcctggttagaacaggacacatcg
tgccctacttgtcgattaggtttgagtatgcaagcgaatcacagagaaaacactccagaa
atgcctcccgagccacagactcctacgagaagaaatggtaaccatttcttcctttttctc
gatgcatcgagatacgtatcttggttgcccagcttctctgtcgaggtctctcataacaga
ttacgtggtaacatatctacattggcacacactaattcccaaatggatgctatggcgaga
caggtacaactactttttccgcattattctcgcaatgtaatcctagaagaccttagaatg
actcgatctgttgaatggacaattgagaatatactcgatggggtattaactataccacat
catttaatcgaagaaccgcaagaagaatccgtcccacaaatgcaatcgactatgacaaat
atgcccagctcttcgattcaaaatccatcggatcctagattcgatattccttttgccgat
agcggagaagaaccttcgagccttggtggccgtttctcgaaatcatctgctgagagagaa
cttatacttcaacgacgaaaagaacatatgcgattaacagcacgcagaaggtatttggag
agacatcggaaaatggagattgattcgacaaattcgcagataacgaatattgaggacact
gaaaatattgcatcctag
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