Solenopsis invicta (red fire ant): 105201293
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Entry
105201293 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105201293
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105201293
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Helicases
105201293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
105201293
NCBI-ProteinID:
XP_039306154
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All DBs
Position
6:12166028..12213950
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AA seq
555 aa
AA seq
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MNKMESNKEIEPKLKNFQELELDDRVLKAITKLGWMEPTLIQEKAIPLLLEGKDLLIRAR
TGSGKTAAFAIPLIQKILSNKRTQEKQEIKGLIIAPSKELCKQIYHVILSLTIKCCREVR
TVDLSSQTDFNAQKLLLSEMPDIVVVTPSRLLQHLKTKNLMLKRSLDTLIIDEADLLFSF
GYEKDLKAVLTYLPTAYQAVLASATLSEDVQTLKKLILHNPAILKLKEPPLAPPTQLAHY
TLAAEENDKAAILYALLKLHLIRGKSIIFVHTVDRCYKLKLFLEQFGIPTCVLNSELPAT
SRCRAVSYFNTGTYDIIIASDEKVLEEPHMIKMKKSKRKKDKESGVARGIDFQFVSNVIN
FDFPLDLNSYVHRAGRTARGKNQGTALSFVAIRERPLMEEVEQELKHTYNCENLFKTYQF
KLEEVEGFRYRAKDAWKAVTRIAVREARLKEIKQEVMSCEKLKSYFEDNPRDLKSLRQDK
TLHIVKLQPHLKDVPEYIVPSTLKKIIGIGRRKRKFDRDSASSGGSIAKSRHLARALNPL
NPSNPNLQIPTNKSL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatggaatcaaataaagaaattgaaccaaaattgaaaaatttccaagaatta
gagctggacgacagagtattgaaggctatcacgaaattaggctggatggagcctacatta
attcaagaaaaagcgattcctctgttactggaaggaaaggatcttttaattagggcccgt
acaggttcgggcaaaactgctgcctttgcaataccacttattcagaaaatattatcaaat
aaacgaacacaagaaaagcaggagattaagggtttaattattgcacctagtaaggagcta
tgcaagcaaatttaccatgttatcttgagcctgacaataaaatgctgcagagaagtcaga
acagttgatcttagttcacaaacggattttaatgctcagaaacttttactgagcgaaatg
ccggacatcgttgtggttactccgagtcgattattacagcatttaaaaacaaaaaattta
atgctgaaacgtagtcttgatacattaataattgacgaagctgacttactgttttcattt
ggttacgaaaaggacttaaaagctgtattgacatatctaccaacagcatatcaagcagtt
ttggcatctgccacattgtcggaggatgttcaaactttgaaaaagttaattctacataat
cctgcaattttaaaactgaaagagccacctctagctcctcctacacaattagctcattac
actttagctgcagaggaaaacgataaagctgctattttatacgccttattgaagttacat
ttaattaggggaaagtctataatttttgtacacactgtagacagatgttacaagctgaaa
ttgttcctagagcagtttggtattccaacttgtgttttaaattccgagcttccagcaacc
tcgagatgtagagcggtttcctattttaacactggcacttacgacattataatagcatca
gatgaaaaagtgttagaagagccgcatatgataaaaatgaaaaaaagtaaacgtaagaaa
gacaaggaatcgggtgtagcacgcggtatcgactttcagtttgtatccaatgtgatcaac
tttgacttccccttggatttaaactcttacgtacacagagcgggacgcactgctcgtgga
aagaatcaaggaactgctcttagttttgtagccattagagaaaggccgttgatggaagaa
gtggaacaggaattaaagcacacttacaattgtgaaaatctgtttaaaacttatcagttt
aaattggaggaagtagaaggatttcgatatcgtgcgaaagacgcttggaaagccgttaca
agaattgctgtccgagaagcgcgattgaaagaaattaaacaggaagtcatgagttgcgag
aagctaaaaagttattttgaggataatccacgtgatttgaagtcattacgtcaagacaag
acattgcatattgtgaaactgcaaccgcatctgaaagatgtaccagaatatatagtacca
tccaccttgaagaaaatcataggaatcggaagaagaaaaagaaaatttgacagggactct
gcatcgtcaggaggatcgattgctaaatcaagacatctagctcgcgctttgaatccattg
aatccatcgaatccaaatttacagataccgacaaataaatctttgtaa
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