Solenopsis invicta (red fire ant): 105201350
Help
Entry
105201350 CDS
T03916
Name
(RefSeq) THO complex subunit 2 isoform X3
KO
K12879
THO complex subunit 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105201350
09122 Translation
03013 Nucleocytoplasmic transport
105201350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201350
03041 Spliceosome [BR:
soc03041
]
105201350
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105201350
Spliceosome [BR:
soc03041
]
Complex C
Other components
EJC/TREX
105201350
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105201350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
105201350
NCBI-ProteinID:
XP_011167642
LinkDB
All DBs
Position
1:31882013..31893980
Genome browser
AA seq
1435 aa
AA seq
DB search
MASKVWHTELWKTWDKHGKNDFLKLIKHKFKEGNTPEWRRGIYELISNGIHGNVKKDSVV
QTLGELTSFDVPSIPSAIVDIFTLIDVEVHNEERNNFYYIVKESEKFLTDRILKERLEID
TLQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPDSEVAST
LEIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCS
TINATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIILDHEQVMKQAKEYVRKLSVIS
TKDKEDVVEEKENAQDKYTNNQKFGLCEALLEIGAWEVAQSLFSRLPDYCLTDQRPIALA
LCKMIQSLIEPVYRKHCIVSPKLPGRKVPPLKSSLAPPSLRDLEDIHDHLLPMLIVLGPN
LHQDPILMYKVMRLCHTAIKHCPLDASKQPLNKNCSLYYDVLTILDVALLPSLSFMDCNC
CVAEELWNILKYYPYQNRYSLYARWKNDTALQHAALLRKRADAQKKIKSIMKRVSKETIK
PVGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAG
ADRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEI
VQKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEQDLAVAL
CLLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHS
MLQDNHIHSDVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQAVMAP
VAQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREVSKLKQLAAQTSDSKDV
NVSKGKKEQERYTTLIEKLQDEKKKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQ
FLQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEA
NRYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVC
HKWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERG
QRQDLHVLATSYSGQLKAKTPNMIRESDFHHVGDKAGKTQDATNNETSEKVSNGVTVKEN
NNGDTRPEKENKEQREKRSSSNQTHHDINSLNSENSEKFRKKEDSKDVLEAKEKYVKKEE
VKDDEGLEKKDRKYYKEEHYYSSAVDNLDRDLSSVSNSSASSGPLQEGPERVSDVKRRRV
ESTPKQEGRRAEVGLDKKERSSKGKTRDEQKELRKEKKQGRKRDRAEESIPTTEQKRRKD
DERAKGTHQNGDIPEHREKHHYSKEKSPYAKDRPHEREGRESRDKHRRSSDPKRR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatacagaattgtggaagacatgggataagcatgggaaaaat
gatttcctcaagctaatcaagcacaaatttaaggaaggcaacacaccagaatggagacgc
ggaatatacgaattaatttcaaatggaatccatggaaacgtaaaaaaggacagtgtagtt
cagacattaggtgaacttacgagttttgatgtaccttccataccatctgcaatagtagac
atatttactttaattgatgtggaagtgcataatgaggaaagaaacaacttttactatatc
gtgaaagaatctgagaagtttttgaccgatagaatattgaaagaacgtttagagattgat
actttacaagatgtagggacattgaaaaacaaaaattttcaaaccaaatttataaaagta
aaaacaaagttatattataaacaaaggaaatttaatttatttcgtgaagagagcgaaggt
tactccaagctcattgtagaattgaatcaggagcgcccagatagtgaggtggcctcgaca
ttggaaattgttaaatctcttatcggttattttaatcttgatcctaatagagtactcgac
atcttattagagacttttgaaaaccgaccgcaagacgacgctctatttattcctttaata
cgttcatacatgagcgatcagcaggtactttgtgaagtgttaggattcaaatactgctct
accatcaacgccacgccgttctcgctgcagaaggtcaccgcgctcatgctgcagcatggt
gtaattaaactggatgatatattaccttggttggtgccagatgataagactataatatta
gatcacgagcaggtgatgaaacaggccaaggaatatgtgcggaaattgagtgtgatctca
acaaaagacaaggaagatgttgtggaagagaaggagaatgcacaagacaagtacacgaac
aatcaaaaatttggattatgtgaagcacttctggaaattggagcttgggaagtagcacaa
agcttattcagtcgtttaccggactattgtctcacagatcaacgtcccatagctttagcg
ttgtgcaaaatgattcagtctcttatagaacctgtataccgaaaacattgtattgtttct
ccaaaattgccgggccgtaaagtgcctccattgaagagttccctcgcgccaccatcgtta
cgcgatctggaggacattcatgatcacttattgccgatgttgatcgtactcggaccgaat
cttcaccaggatcctattttaatgtacaaagtgatgagactttgtcacaccgccatcaag
cactgtccacttgacgcaagcaagcaacctctgaacaaaaactgcagtctctattatgac
gtgctgactatactcgatgtcgcacttttaccctccctctccttcatggattgtaattgt
tgtgtcgccgaggaattgtggaacatccttaaatactacccttatcaaaatcgttatagt
ttatacgcgcgctggaaaaatgacacggcattacagcacgctgcactcctgcgaaaacgc
gccgatgctcaaaaaaagatcaaatcgatcatgaagcgcgtgagcaaggaaacgatcaag
ccagtcggccgatcaataggcaagcttacacattcttcgccaggtgtactattcgattac
gtcctcatacagatccaattatatgacaacctaataggacctgtggtggattctttaaag
tacttgacaaatatctcgtatgatgtattgggatattgtctagtagaagctttagcgggt
gctgatagggatagatttaaacacgacggcaccagtatatctttgtggctgcaatctctg
gcttctttttgtggagcgatatttaaaaagtataacatcgaattaacagggttgttacag
tatgtagcgaatcaacttaaagctcaaaagagcttagatctgttaatattaaaagaaata
gtacaaaaaatggctggtattgaggcagccgaagaaatgacatctgatcaattagatgct
atggcaggcggagatcttttgaaaaatgaggctggttactttagtcaagtccgcaatacg
aagaaatcctcgcaacgtttgaaggaagctcttgccgaacaagatctagcggtcgcgctg
tgcttgttaatggcacagcaaaaacattgcgttgtttatagagaaacagataaatctcat
ttaaaactcgttggcaagttgtatgatcaatgccaggatacgctagtacaatttggaact
ttcctgggttcaactatgacggtagacgagtatgtcgagcgactaccttcgattcattct
atgctccaggataatcacatacattcggatgtcgcgtttttcctggcacggccaatgttc
gcgcatgccataaatataaaatatgatgctctccgtaaagctgatccgaattataaaaaa
atgtccacggcaatgaagcaattaaagtatgcagaagccgcgcaagctgttatggcacct
gttgctcaatctgttaggccgttgcatcctctaaaggtttgggaggatatatcaccacaa
ttcttagtcacgttttggtctctatcgatgtacgatttgtatgtgccagtggaaagctat
caaagagaagtcagcaagttgaagcaacttgcagcgcaaacctccgattccaaagacgtg
aatgtaagtaagggaaagaaggaacaagaaagatataccactcttattgaaaaactgcag
gatgaaaagaagaagcaagaggagcacgtcgaaaaagtttttgcgtacctgagacaagaa
aaggacacatggtttttatcacgaagcgctaaatctgcaaagaatgaaacgataacgcaa
tttctacagttgtgcctattcccacgatgtacattcacaactgtggacgccatgtactgt
gcgaaatttgtacataccatccattctctgaagactgcaaatttttcaactctgctttgc
tacgatcgtcttttctgtgatattacatattcagtcacttcgtgcacagagaacgaagca
aatcgatatggcagatttttatgcgctatgctggaaactgtaatgagatggcattccgaa
aaagccatatttgataaggaatgcagtaattatcctggttttgtaaccaagtttcgcgtg
agcaatcaattttccgaagcaaatgatatggttggatttgaaaattacagacacgtgtgt
cacaaatggcattataagatcacaaaggctattgtagtgtgtctagattctaaggattat
gtgcaaataaggaattctttgataatattgataaaaatattaccacattttcctgtcttg
gcaaaactctctcagattctcgaacgaaaggtagaaaaggtgagagaggaagagcgtggc
cagcgccaggacttgcatgtcctagcaacatcgtatagtgggcaattgaaagctaaaact
cccaatatgatacgtgaatcagatttccaccatgtgggcgataaggctggtaaaactcaa
gatgcaacgaataatgaaacgagtgaaaaagttagcaatggagtaacggtgaaagaaaat
aacaatggagatactcgaccagaaaaagaaaacaaggagcaacgagaaaaacggagctcc
tccaatcaaacgcatcacgatatcaattctttgaatagtgaaaactctgaaaaattcaga
aagaaagaagacagtaaagatgttttggaagcaaaagaaaaatatgttaaaaaagaagaa
gtgaaagacgatgagggattagaaaagaaagatcgcaaatattataaggaagagcactat
tatagcagcgctgtagataatttagatcgagatctttccagtgtttcaaatagtagtgcg
agttcgggtcctttacaagaaggtcctgaaagagtttcagatgtaaaaagaagaagagta
gagagcactccaaagcaggaagggagacgcgcggaagttggactggataaaaaagaacgt
tctagtaaaggaaaaacacgtgatgaacagaaggagctgcgtaaggaaaagaaacaggga
cgaaaaagggatcgggcagaagaatccataccaactaccgagcagaaacgaagaaaagat
gatgaaagagccaaaggtacacatcagaacggtgacattcctgaacatagagaaaagcat
cattacagtaaggaaaaatctccatacgcaaaggatcgtcctcatgaacgtgaaggacgt
gaaagccgtgataagcacagaaggagttcagacccgaaacgaagatga
DBGET
integrated database retrieval system
