Solenopsis invicta (red fire ant): 105201369
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Entry
105201369 CDS
T03916
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105201369
Transcription factors [BR:
soc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105201369
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
105201369
NCBI-ProteinID:
XP_011167661
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Position
13:complement(5970241..6005706)
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AA seq
393 aa
AA seq
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MRAGGNMCDGSFTETLRSMQGMTGTTTPALPGGSAGVGHMGVGLGSPLGSAGKKMQGEHI
KRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQH
MKEHPDYKYRPRRKPKTLRKEGYPYSIPYPSVPMEALRAGMASGMGQAGMGSYYTPAAAY
GSLSAASMAAAAAAAAQQSAAMSGLGAPAQVVGSMDAMKYSMEADKYRAAYMPPSTLAMS
MYPDPKYLDSSNPKAYLDRTYLDAKAYFEGVQQSKLYMDQKPIAEYNRPSYEPNKLYEES
SPGSVVGGSGPARSPPAESPDTSKQHERTEQGSSSASSTSTSSAASPGATLPAYYPGSVQ
AGGLLGPQMGQYGGYQMAPAPGNESFRRPLVIL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctccttcacagaaactctgcgcagtatgcaa
ggaatgacgggtacaacgacaccggcactacctggtggtagcgccggtgtcggtcacatg
ggagtcggcctcggtagcccgctcggatcagcaggcaagaagatgcagggagagcacatc
aaacgaccaatgaacgctttcatggtctggtcacgcctacaacgacggaaaattgcgcaa
gagaatccgaaaatgcacaacagtgaaatctccaagaggctcggtgcagaatggaagctt
cttacggaagacgagaaacgcccgttcatcgaccaggcgaagaggttacgtgctcaacac
atgaaggaacaccctgattacaagtacagaccgcgaaggaaacccaagactttaaggaaa
gagggttacccttatagcattccgtacccaagtgttccgatggaagctcttcgagctggg
atggccagtggcatgggacaggctggaatgggctcctattacacccctgccgcggcttac
ggctcgctctcggcagctagcatggctgcagccgctgccgcggctgcacaacagtcagcc
gccatgtctggtctcggggcacctgctcaagtagtgggctcgatggacgccatgaagtac
tccatggaggctgacaagtaccgcgccgcctatatgccgcccagcactctagcaatgagc
atgtatccggatcccaagtacctggattcttccaatcccaaggcttatctggatcgcacc
tacttagacgcgaaggcgtacttcgagggagtgcagcaatcgaaactgtacatggatcag
aaaccgattgcggagtacaatcggcccagctacgagcccaacaagctctacgaggagtcc
agcccgggtagcgtcgtcggtggaagcggacctgcgagatcaccgcccgcggagtcgccg
gataccagcaagcaacacgagaggacggaacagggctcgtccagcgcgagttcaacatcg
acatcatcggccgcgagcccgggcgcgactctgccagcgtattatcccggatcggtccaa
gctggcggcttgttgggcccgcagatgggtcagtacggtggataccaaatggcaccggca
ccaggaaatgaatcttttcggcggccgttggttatcttgtga
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