Solenopsis invicta (red fire ant): 105201426
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Entry
105201426 CDS
T03916
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201426
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105201426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
105201426
NCBI-ProteinID:
XP_011167733
LinkDB
All DBs
Position
11:complement(11632421..11639153)
Genome browser
AA seq
1404 aa
AA seq
DB search
MSKPNIRKITADPTKCNTDSSRRPSVFERLGTKPAITAAAAAQNTSDYCRNWALNGSCSY
GKSCKYANTHTLISPSKRAKKDNAIASTSGLIEDPFKRLTSKIVKKASHSPDLNIEEWNQ
TDLEYEDEKVLERRRQLLQRELELQMKKDKEVHGKDKVRQKKKAMSSSSSSRTSSTSSSS
SSSSSEDSSSTSTSDSHKKIKKIKTKRHHSISADYNEDKERKRKLKLKRLGTRNDKAINK
KKRKLENSSTKKDLTTRSVKKYGTTSVSRKHSSSLRARSPTVQQGSTSGVTSVAATTLGS
QVSVAHHASSSSKIRERNRSDSPKAIKSNREVDKEDSRHYKKVRDMDECLSKDAVKCKSF
DKIKEQQEKEKNRAVDEKTKADDRLRSKCKDKDVRSRTPPPPPSSSERSSKYQHVKENAS
SKPQRSRTPSRTRRDLTPAKNPEKQGNSSNRVRDMEKKDRDSHKRDKSKERDDARKNEQT
SSGKAKQTSVTSNQDENYRRSNTTSKDNFDEKNYSGDKARQKSRERQREKETRDERPSRL
TRDQRQEPQRDKDKDESQERCRNERQRERDRDRDRDRERERERDRERDRDRERERERDRE
RERDREIRERDRERDREREKSMKSRERDVPATVISPVALSLSADKGSRYSSRIKERPLGK
DMSFEKGGGTRERSRSERERERSETKALADRERNSTQSRLDGRYERSGVVEKDNVSSSRG
KSTVNSPRDRMDRFRETSLDRAPLHDKGGHVATSSSVQSAATLPPVPPASSSSSAAAVTS
ALPSRDHLIDMVDGGHYDRDRHRRFGVRYERGHTSEHNSRKDQARIESNRVPNKIDRIVD
RRDANSPRRTMEVDRNFGRNYGRLPEHWDEQEETATHVEYRDHVHIHEDDRRKTVEGRRY
DSPFEERRVARDERPRESRYVIQTTERASFDDHRHHHHHHRHPPLYPGDKLRSGAANIRD
ETVSNDNWEGHHRDAEHGRDRGYQTVEWEEREWRTRTAALWEGRDSLPRSEIHDEEWNSR
YDNSMNEWKSNDARKWDNQNAHVRSHYRNERSKDLEHGESTQHNKRRSYNAPEVREEPAI
HPSAKQAAIYGSMKEEPINKKLMELAEGRLCTTTTREKSTDNFQKKNLQKDKSEIKEPVV
VEPKRSIADESLQTLHTESDLSDISDDPDDILNMEEDTTDMEANKTRANKKTLDAAHRDA
QSTVQESTQLSPKESTEETIFNSKSKDNADAVSLKNMEDDNMETMDFEEISDGELEEDIK
TSGKGLGDALGVDWESLVKETQARRIAPSNQDSAENRWQCKAIFYRIGISKKYAGEDFVK
KLLKKYEKNDHKEFLLNDVALMHTTLARNRLLQDMGNGAMHTVDDILYRNNNACYDEDVD
CDQETWKPSTALYEEAKCLLQQVI
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccaaacataaggaagataacggctgaccctacgaaatgtaatacagactct
tcacgacggccgagtgtgtttgagaggttgggcaccaaaccagcgatcaccgccgccgcc
gccgctcagaatacatcggattactgcagaaattgggccctcaacggcagttgttcctac
ggaaagagttgcaaatacgcaaatacacacacattgataagtccatccaagcgcgctaag
aaagataatgcgatcgcaagtacatctgggctcattgaggatcctttcaaacggctcaca
tcgaagatcgtgaaaaaggcgtcccacagcccggacttaaatatagaagagtggaatcag
acggatctagagtacgaagacgaaaaggtgttggagagacggcggcaattgttacaacgg
gaactggaattacaaatgaagaaggataaagaagtacatggcaaggataaagtaaggcag
aagaaaaaagcaatgagctcctcttctagttcgcgcacatccagcacgtctagcagtagc
agcagctccagcagcgaagattcgtcttctacttctacttccgattcacacaagaaaatc
aaaaagatcaagaccaagagacaccatagtatttccgccgattataacgaggataaagaa
agaaagagaaaattgaagctcaagagactaggaacgagaaacgataaagccatcaacaaa
aagaaacgcaaactcgagaatagttccacaaagaaggatcttaccacgagatcagtcaag
aagtatggcacgacgtctgtatccagaaagcattccagctcgttgcgcgctcgatcgcct
actgtacaacagggttctacgagcggagtcacatctgtggcagccacaacgttgggctcg
caggtttctgtagcgcatcacgcgtcgtcctccagcaaaatccgagaaagaaacaggagc
gattcgccgaaagcgataaagagtaatcgagaagtggacaaggaggacagcaggcattac
aagaaggtgcgtgacatggacgagtgtttgtccaaggacgctgtcaagtgcaagtcattc
gataaaatcaaggaacaacaggagaaagagaagaatcgcgctgttgacgagaagaccaaa
gcagacgatcgattgcgatccaagtgcaaagacaaggatgtgcgttcgcgtacgccgccg
ccgccgccgtcgtcatcggagcgctcatccaagtaccagcacgtcaaggagaatgcgtcg
tcgaagccacaacgtagccggacgccatcgaggacgagacgcgatctaactccggcgaag
aatcctgagaagcaaggcaactcgtcgaatcgcgtaagagacatggagaagaaggatcgc
gactcgcacaaaagggataagagcaaagaacgagatgacgcgaggaagaacgagcagacg
tcttccggcaaagcgaaacagacttcggtgacttcgaatcaggacgagaattatcgaagg
agcaacacaacgagcaaagacaacttcgatgagaagaattacagcggcgacaaggcgcgg
cagaagagccgcgagcgtcagcgcgagaaagagacgagagacgagcgtccctcgaggctg
actcgcgatcagcgtcaagagccccagcgtgacaaggacaaggacgaatctcaggagcgt
tgtcgtaatgagaggcagcgcgagcgggatcgcgatcgagatcgggatcgagagagagag
cgcgaacgcgaccgggagagggatagagatcgcgaacgggaacgggagcgcgatcgcgag
cgggaaagagatcgggagatacgtgagcgggatcgcgagcgggaccgagagagagagaag
tctatgaagtcacgcgagagagacgtgcccgctacggtgatttcgcccgtggcgttgagt
ctatcggcggataagggttcacgttacagcagcagaatcaaggaacggcctttaggtaag
gatatgtcgtttgagaaaggcggcggcactcgcgagcgcagcaggagcgagcgcgaacgg
gaacgatccgaaacgaaggctctcgccgaccgggaacggaactccacgcagtcacgtctg
gacggaaggtacgagagaagtggcgttgttgaaaaagacaacgtgtcgtcgagtcgcggc
aagtcgaccgtcaattcgccccgagatcgcatggatcgttttcgggagacgtctttggat
cgtgcgcccttgcacgacaagggcgggcatgtcgcgacgtcgtcgagcgttcagtcagca
gcgacgttaccgcccgtgccgccggcgtcgtcttcctcatcggcagcagccgtgacatcc
gctctaccatctcgcgatcatctgatagacatggtggatggtggtcactacgacagggac
cggcatagaaggttcggtgtaagatacgaaaggggtcacacgtcggagcacaacagtaga
aaggaccaggcgcgaattgaatcgaatcgcgtaccgaacaagatcgatcgaatagtagat
cgtcgagacgcgaacagtccgcgacgcaccatggaagtggacaggaactttggtaggaac
tatggtagacttccggagcactgggacgagcaggaggagacagctacacacgtcgagtat
cgtgatcacgttcacattcacgaggatgacaggagaaagaccgtcgagggcagaaggtac
gacagtcccttcgaggagagacgcgttgctcgcgacgagagacccagagagtcgagatat
gtgatccagactacggaacgagcatctttcgacgatcatcgtcatcatcatcatcatcat
cgacatcctcctctctatcctggcgataaactgagaagtggtgcagccaatattagagat
gaaactgtttctaatgacaattgggagggacatcatcgtgatgcggaacatggtcgagac
cgtggttatcaaactgtcgaatgggaagaaagggaatggcgcactagaacggcggccttg
tgggaaggcagagatagtcttcctcgttcagagatacatgatgaggaatggaattctcga
tacgacaattctatgaacgaatggaaatctaacgatgcgcgaaaatgggataatcagaac
gcgcacgttcgatcacattacaggaatgagcgctcgaaggacttagagcacggagaatct
acacaacacaataaaagacggtcgtataatgcgccggaagtgagagaagagccggcgata
catccttctgctaagcaagctgctatttacggcagcatgaaagaagaacctattaacaag
aagttgatggaactcgctgaaggtagattgtgcacaactactactcgagaaaagtctacg
gataatttccaaaaaaagaatttgcaaaaggataaatctgaaatcaaagaacccgtcgtg
gtggaaccaaagcgttccattgccgacgagtctttgcaaacacttcatactgagagcgac
ttgagtgatattagcgatgatcctgatgatatattgaatatggaagaagataccacagat
atggaagctaataaaacacgggcaaataagaaaacactggatgctgcacatcgcgatgca
caatcaactgtacaggaatcgacacagttatctccaaaagaatctactgaagaaactatt
ttcaattcaaaatctaaggataatgctgatgctgtatcattgaagaatatggaagatgat
aatatggagactatggactttgaagaaatttctgatggcgagctagaagaggacattaaa
acaagtggcaaaggattaggtgatgccttaggagtcgattgggaatccctcgtgaaggaa
actcaagcgagaagaattgctccgtctaatcaagactccgcggagaatcgatggcagtgt
aaagctatcttctatagaatcggtatatccaagaaatatgcgggtgaagatttcgtgaaa
aagctgctaaaaaaatatgagaagaatgatcataaagaatttttactaaatgatgttgca
ctaatgcatacaacgctcgcgcgaaatcggttacttcaggatatgggtaatggcgcgatg
cataccgtagatgatatcttgtatagaaataataatgcgtgttacgatgaagatgtggac
tgcgatcaggaaacgtggaagccaagtactgccttatatgaagaagcaaaatgtttattg
cagcaagtaatatga
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