Solenopsis invicta (red fire ant): 105201524
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Entry
105201524 CDS
T03916
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105201524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105201524
Enzymes [BR:
soc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105201524
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105201524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Rpr2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
105201524
NCBI-ProteinID:
XP_025990315
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All DBs
Position
1:complement(31750093..31756846)
Genome browser
AA seq
1125 aa
AA seq
DB search
MNLSNMLVEPKLTNTSPNFGRSPDTQNEILQSLGTPHIESFNYMLEDGLYQNLKDNTPVY
VTLPNSDKIVLWLDDVHIYKPAAPTNTIGLKSYKIYPSECRQRGVTYKGKIIARIGWSIN
GKEQEILEKDLGEVPIMLKSNRCHLNKMSPKELVAHGEHEQEWGGYFIIKGLERLVRMLI
MTRRNYPIAVKRPIWKGRGEQFSDLGILLRSVRDDNSTVNNTLHYVTDGSAKFAFAYKKA
TYYVPLILMLKCLKDVTDLCIYKALLAGCEDDLYYNNSIMNMLRAVHEEGLHWHEQCKAY
IGKMFRVKFSELPEDATDIDVCDYIVKNCVAIHLDEPADKFDLLVFMTKKLFAFSNNKCA
VEGVDSVMMQECLMGGHLYLQVLNEKLCSWLVGVKHHILKRAKSAGNRYTLSVQEMLNVT
KLRCNIDAQMEYFLSTGSIRSSSGLGLTQSSGLTIVVENINRMRYMSHFRAIHRGAFFQE
MRTTEARQLLPDAWGFICPIHTPDGAPCGLLNHLTMNCIVTKHPNAKLKAAIPTVLVDLG
MTPLPIADDWKNSYNVMLDGKLIGLIEDKIINKVVYELRLRKIKGKEIPSTLEIALVPKK
NVPAQYPGLFLFTSAARMMRPVINLAAQKIEYIGTFEQIYLDICVISQEVYEGMTTHQEI
SQTTIFSNLANLIPMPDCNQSPRNMYQCQMGKQTMGTPCHNWQQQSQTKLYRLQTPATPL
FRPVHYDNINMDDFAMGTNAIIAVISYTGYDMEDAMIINKSSYERGFGHGSIYKSEFVDL
NDKKSYFARDPAKPDLAKTIDVDGLPMIGIAIKEGDAYYSYYDADSAQYVIGKYKSAETA
YVDNVKLCGSLGNHDIRRACITFRIPRNPIVGDKFASRAGQKGILSRLYPIEDLPFTETG
MVPDIIFNPHGFPSRMTIAMMIEVMAGKSAAVHGLVHDATPFRFDEENTAIDYFGKLLEL
GGYNYYGTERMYSGIYGCELTANIFFGIVHYQRLRHMVSDKWQVRSTGPIDQLTRQPIKG
RRRGGGIRFGEMERDALISHGCSYLLQDRLFHCSDKITTLACQKCGSILGPELTVKSRID
DDDKKCRLCGEEDTVDEIEIPYIFKYLLIQLASCNINVKLKFRKV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcgaatatgttggttgagcctaaattgacgaacacgtcaccaaatttcggc
agatcacccgatacacaaaacgagatattgcaatctctgggtacacctcatattgaatcc
tttaattacatgctggaagatggcctttatcaaaatttaaaggataacacgcctgtatat
gtaactcttcctaatagcgacaagatagttctttggctggacgatgtacatatctataag
cctgctgctcctactaatacaattggtttgaaatcatataaaatatatccatcggaatgt
cgacaaagaggtgtcacttacaagggtaagataattgccaggattggatggtccattaat
ggcaaagaacaggagattcttgagaaagatttgggagaggttccaatcatgctcaagtct
aatcggtgtcatttaaacaaaatgagccctaaggaattagtcgcacatggcgaacatgaa
caagaatggggtggatacttcataatcaaaggtttggagcgactcgtacgtatgctaata
atgacaaggcgaaactatcccatcgctgtcaagagaccaatttggaaaggtcgcggcgag
caattcagcgacttaggtattcttttgagaagcgttcgggatgacaactctaccgttaat
aataccctgcactatgtgaccgatggttctgcaaaatttgcgtttgcatacaaaaaagct
acatactatgtgccattaatactgatgttaaaatgtttgaaagatgtaactgacttatgc
atttataaagcattactcgctggatgcgaggatgatctttattacaataatagtatcatg
aatatgttacgtgctgtacatgaagagggcctacactggcacgaacaatgtaaagcatac
ataggaaagatgtttagagtaaagttttccgaattacctgaagatgcgactgatatagac
gtttgtgattacattgttaagaattgtgtcgctattcatcttgacgaacctgctgataaa
ttcgacttgcttgtatttatgaccaaaaaactgtttgccttttcaaataacaaatgcgcc
gttgagggtgtggactccgtgatgatgcaagaatgtttaatgggcgggcacttgtatcta
caggttctcaatgaaaaactgtgttcatggctggttggggttaagcatcatattctgaag
cgtgccaagagtgctggtaatagatacaccttaagtgtgcaggaaatgttgaatgttact
aagttacggtgcaacattgatgcacaaatggaatactttttgtccactggaagtataagg
tcatcttccggtttgggacttacgcaatcctctggtcttacgattgttgtggaaaatatc
aataggatgcgttatatgagtcattttcgtgcgatacacagaggcgcattctttcaagaa
atgagaactactgaagctagacaattgttgcctgatgcatggggatttatctgtccgatt
catacaccggacggtgctccatgcgggttgctcaaccacttgacaatgaattgtattgtt
acaaaacatccgaatgcaaaattgaaagccgcgatacctacagtactggttgacctcgga
atgactccgttacctatcgcagatgattggaaaaattcatataacgtaatgttggatggg
aaattgattggcttgattgaagacaaaattattaataaagtagtctacgaactgagatta
cgtaagataaagggtaaagaaataccatcaacactggagattgcattagttccaaagaaa
aatgttccagctcagtatccgggattgttcttatttactagcgcggctagaatgatgaga
ccggtgataaatctagctgcacaaaaaatcgagtatataggaacatttgaacaaatttat
ctggatatttgcgtgatttctcaagaagtttacgaagggatgacgactcatcaagagata
agccagacaacaatcttcagcaatttagctaatctcatcccgatgccggattgtaatcag
agtccaagaaatatgtaccaatgtcagatgggtaaacaaacaatgggtacaccgtgccac
aattggcaacaacagtcacaaacgaaattatatagactacaaacgcctgccacaccactt
tttaggccggtacattatgacaatattaacatggacgactttgcgatgggtaccaatgcg
ataattgctgttatctcatatacaggatacgatatggaagatgcaatgatcatcaacaag
tcgtcgtacgaacgtggcttcgggcatggatcgatttataaatctgaatttgttgatttg
aacgataaaaaaagttattttgctcgcgatccggctaaacctgaccttgcgaaaacaata
gatgttgacggtttgcctatgataggtattgctataaaagaaggagacgcgtactattcc
tattacgatgctgatagcgcccagtatgtcattggaaagtataaaagtgcagaaaccgct
tatgtcgacaacgtaaaactgtgtggctcgttaggcaatcatgatatccgaagagcgtgc
attacattccgtattcctaggaatcccattgttggagataaatttgcgtcaagagcggga
caaaaaggaattctctcgcgattatatcccatcgaggatttaccattcacggagaccgga
atggttcctgatattatattcaatccgcacggtttcccgagtcgtatgacaatcgctatg
atgattgaagtgatggccgggaaatcggcagctgtgcatggattggttcacgatgccaca
ccctttagatttgacgaagagaatacagccatagactacttcggaaaattattagaactc
ggtggttataattattatggaactgagagaatgtactcaggcatttatggatgcgagtta
actgccaacatcttctttggcattgtgcattatcaaagattgcgacatatggtctctgat
aagtggcaggtgagaagtactggaccgattgatcagctcacaagacaacccattaaaggt
cgtcgacgcggcggcggtattcgattcggagagatggaacgagacgctcttatttctcat
ggttgctcatatcttctccaagaccgtctctttcattgttctgataaaataacgacttta
gcgtgtcaaaagtgcggctcaatacttgggccagaattaacagtgaaaagtagaattgat
gacgacgataagaagtgccgtttgtgcggcgaagaagataccgtggacgaaattgaaatt
ccatatatctttaaatatcttttaatacagctagcatcctgcaatataaacgttaaattg
aaatttaggaaagtttga
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