Solenopsis invicta (red fire ant): 105201691
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Entry
105201691 CDS
T03916
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105201691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201691
03036 Chromosome and associated proteins [BR:
soc03036
]
105201691
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105201691
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105201691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105201691
NCBI-ProteinID:
XP_025995169
LinkDB
All DBs
Position
15:complement(420655..488756)
Genome browser
AA seq
1918 aa
AA seq
DB search
MFGQTGNTSFSGFSAPTQNSLFGQSAFGKPITTTSFGSGATPVFGSSNTSLFSSKPTGST
TGGLFGNTTTPPAFRQPTNTQPSFGGFGTTNTSTNLFGTQQNAGTNLFGTTTGTSAFGQA
NKPGFNFGTTSGTNLFGQPQQNPQQTTPFGQANTTTNTNLFGTTTGFGNTNPTTVPAGTA
VKFTPVITTDSMSKNGISHTISARHCCIASMKEYESKSYEELRFEDYQIGRKGPQTGLFG
TSAQTSPFGSTTAGTSTANTGFGPMAGGFGTPNQSGSTGLFGKPISNFGTPATTTTSSFV
FNSPPPTTNLFGTNTQTKPFGTAAPTPLFGTSSTNQTAGTGFGSINTAQNTGFGSAFGST
QPNQSIGLFNQNKSAFNIPSTSTTTGFTGFGQPATNSTTLFGNKTTTTGFGGTSTFGTTA
PSTFGTNTGFNPGSNAGSSLFNSSFKPAGQTPAFSFGATPASSTGLGTNTGLNLGSGSSL
FGQQKPGSLFGNTGNNMTFNNPGTFGSSTFGASSNMMSGTGMGLINGGVVSNQAKTNGSV
PVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPTSKVLNSPQYRVTANNKSPKI
KARVVSSSQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKSATNSSVQSPIENGES
ITRNCTADDRTDTSNVIHSNNIEVNDKENHSQDNNRLVNDRRSSTSWLKSTLPRKNKILD
DELLEGQRSPFSGTNVSDEVNNTVAELRSQNNISNHSETINSIEVPLNSTFEEKNSANLT
MPNAESGQEADESSFSILQSNWSMNIAKITLRRAGYYTIPPLDKLDEFVCGETCIVPNFT
IGREGYGNVYFPDSFDVYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRRAQVTLDKV
WPHDKSLHEPITDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYGLS
DSDEDDNQISSTSEAKKLKGFPAPVQKGVGKSIDPSAGMNKEAINGMAINGTLDGTKIGN
SKQPSAVEDFLGKTPIIRFAYNDRSYDERGMIISPIGETSFGRSDFIRGDYSYEKRITVS
PVGDNARVAGTDSHKLQLMKASFFDANDEDINEEETSNGIFPSVQKTLIRYFSDVTEAKS
DQEAPYNATTLCATLVNETFSTPLPENLALCASRRSHLPRIGAQDKQLIIEKIVSPCVVT
PITSVLKYHYEVVPLKESRLNRLRFRCVADAGVYMGRTFRPSWGAGLTLLSLSTQEQATK
MQLRSAFSHLSRYVSGRPVDDVSSTVIVQRLQILGGDEYDAKTFRDSIERHLRIQLDHCV
IGHEEDCPTFNVATDNANEALQLHCTLAQDFAEKEQRPSEDTNDEQIQGSGANERSFRQY
ASIVWTLCVALWGNYASQDTVNNANEEHYNVMMRREAVGGWLRNVVQRSVEREIKSIDSE
AKSSHEKTILSLLSACKLEDACQEARKAGDHCLALLMAQLRSGAMVKKLIKQQLALWQET
DVDENLTIDRLKLFMLVAGEPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTCSITDAL
DLYEASFNTTEAQMYTAMPEPEYRENDYDAELSNGKRIYDLCFHLLKLYCTGNHDLGELL
NPLSYTANPLDYRLSWLMQQTLVALGYTHLSDHVAALTHINFATQLEAHGLWHWAIFVVL
HLRDSSRRRTAVQNLLLRHIEIDDTPEYVKREQFLKEELGISSVWIHQAKAIKSSINKRY
GEAAWYYIQAEQWTQAHEIIIEHLAADAIINENYDYLKSLLSSLIAAECSGTISGWSHQG
QLLWEYMEITSEIQSLLKSDPDYCGLTYQLEALKPRLTDLCHKIDQFPCPTAKHRLCQAE
IAKRTLHLARNLLLLQKNEQRSVTKLLVRLISQLPLPEDYAQQELRPIVNMRVAEVIP
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaaccggaaatacatcgttcagtggatttagcgcaccaacgcagaacagt
ctgtttggccagtctgcttttggtaaacccattactacgacaagttttggtagtggcgca
acacccgtctttggtagtagcaatacttcactctttagttctaagcctacaggttctact
acaggtggcttgtttggaaataccacaacgccaccggcatttagacagccaactaatact
caaccatccttcggaggctttggaacaacaaatacaagcaccaatctttttggcacccaa
caaaatgcagggacaaacctttttggtacgactacaggaacttcagcatttggtcaagca
aacaaacctggcttcaactttggcacaacatccggaaccaatctatttggacagccacag
cagaatccgcaacaaactactccgtttggtcaagctaatactaccacaaatacaaatctc
tttggtacaactacaggttttggtaataccaatcccactactgtaccagctggtaccgcg
gtaaaattcacacctgtcattacaactgattctatgtcaaaaaatggaatatcacatact
atatcagcccgtcactgttgcattgcatctatgaaggaatatgaatccaaatcgtacgag
gagttacgttttgaagattatcaaattggaagaaaaggtccacaaactggtctttttggg
acatcggcacagacgtcgccgtttggtagcacaacggctggtactagcacagctaacaca
ggatttggaccgatggccggaggattcggtacccccaaccaatcgggatcgaccggacta
tttggaaagcccattagcaattttggaacaccagcgactacgacgaccagcagttttgta
tttaattctccgccccccactacaaatctgtttggtactaatactcaaacaaagccattt
ggaacagctgccccgacgcctctttttggcacatccagtactaatcaaactgctggaact
ggttttggtagtattaatactgcacaaaatacgggatttggatctgcatttggttctaca
caacctaatcagagtattggattgtttaatcagaacaaatctgcttttaatattccatcg
acgtcaactaccactggcttcactggtttcggtcagccggctactaattccactacatta
tttggtaataaaactaccactactggatttggaggaacatctacttttggtacgaccgca
ccatctacattcggaaccaatacaggtttcaatcctggctctaatgctgggtcttcattg
tttaactcgtcattcaaaccagcgggacaaacgccagcattttcttttggagctacaccc
gcgtcttcaactggacttggtacgaatactggtttgaacttgggcagtggttcttcatta
tttggacaacaaaaaccaggcagtctgttcggaaatactgggaacaatatgacgtttaac
aaccctggaacattcggatcttctacttttggagcaagctccaacatgatgtctggaaca
ggaatgggcttgattaacggaggggttgtgtcaaatcaagctaagacaaatggttcagta
ccagtacatcaacaaatcttggctcttgtttccgccccatttggtgattcaccattattg
aagaatcttttaccggcatctggaaagaccgaggaactcttaaaacctacgaatccaaca
tcgaaagtactgaacagtccgcaatacagagttactgccaataacaaatctccgaagatc
aaagcgagagtcgtcagttcttcgcaactgtctaagaaatctttgttcgacggtctcgaa
gaagaagatcccgtaataaccgaggcttttcaaccccggccaagcgcgaaacgtttggtg
ttgcgaccaaagtcggcgacaaattcctcggttcaatcgcccatagaaaacggagaatcc
ataacgagaaattgtactgcagatgacaggacagatacgtcaaatgtaatacatagtaac
aatatcgaagtcaacgacaaagaaaatcatagccaagataataatcgacttgtgaatgat
cgacggtcgtctacatcttggttaaaatccacacttccgcggaaaaataaaattttggat
gacgaattgctcgagggacagcgatcgcctttttctggaacaaatgtatccgatgaggtg
aataatacggtggccgaattgagatcacagaataatatatcgaatcattcggaaacaatt
aattcgatcgaggtgccattaaactctacttttgaagagaaaaactcagcaaatcttacc
atgccaaatgcagaatctggccaagaagcagacgagagctcgttttctattctacaatca
aactggagtatgaacattgctaaaattacattacgacgagcaggctattatactattcca
cctctcgacaaattagacgaatttgtttgtggcgagacgtgcattgtaccgaactttacc
atcggccgcgagggttacggcaacgtatactttccggattcattcgatgtgtatggtttg
aacctcgatgaaattgttcactttcgtcataaggaggtaatcatctatcccgacgatgaa
aaaaagccaccagtgggacaaggtctgaatcgaagagcgcaggtcaccctggacaaagtg
tggccgcatgacaagtcactgcatgagccgattacggatccacagcgacttgctgcgatg
aactatgaaggaaaattgcgccgagtgtccgcgaagcatgacacccgcttcctcgagtat
cgaccagagactggttcgtgggtttttaaagttgaccacttttccaagtatggtctcagc
gattcagacgaggatgacaatcaaatctcgtcgacttcggaagcgaagaaactgaaggga
tttcccgcgcccgtgcaaaaaggcgtgggtaagtccattgatccatccgcggggatgaat
aaggaggcgattaatggaatggccatcaacggaacgcttgacggtacgaagattggaaac
agcaagcaaccaagtgcagttgaggattttttaggaaagactccaatcatccgttttgct
tacaatgatcgcagttacgatgagcgaggaatgattatcagtccgattggggagacctcg
tttggtcgttctgattttattcgcggggattatagttacgagaaacggataactgtcagt
ccagttggtgataatgctcgagtcgctggtactgatagccacaagttgcagctcatgaag
gccagcttctttgatgcaaacgatgaagacataaatgaagaagaaacgagcaatggcata
tttccctccgtgcagaaaaccctaatacgctacttctcggacgttacggaggccaagagc
gatcaagaagctccatacaacgctacgacgttatgcgcgactctcgtgaatgaaacgttt
tctacgccactcccggagaatctggcgctttgcgcatctagaagatcgcatctgcctcgt
atcggcgcgcaagataaacagttgatcatcgaaaagattgtttcgccgtgtgtagttacg
ccgatcacgagcgtgctgaagtatcattatgaagttgtgccgcttaaggagtccaggttg
aataggttgcgatttcgctgcgttgctgacgccggtgtatatatgggtcggacgtttcga
cccagttggggcgctggactgacgctgttgtcactgagcacgcaggagcaagcgactaaa
atgcagctacggagtgcatttagtcatttaagtcgctatgtctctggtcgtcctgttgac
gacgtctcgtcgacggtgatcgttcaacgcctgcagattttaggcggtgatgaatacgac
gcaaaaacgtttagggacagtatagaacgtcacctgagaatccagctagatcattgcgtg
ataggtcacgaagaggactgtcctacatttaatgtggcgactgacaatgcgaacgaggca
ttgcagttgcattgtacgctggcgcaagatttcgcagaaaaagagcaaagaccaagtgag
gacaccaacgacgagcagatacaaggtagcggtgccaacgagagatcgttccgtcaatac
gcgagtatcgtgtggactctgtgcgtggcgctctggggaaattacgccagtcaagacaca
gttaataatgctaacgaggaacactacaacgtcatgatgagaagggaggccgtgggcggg
tggctaaggaatgtagtacagagatcggttgaacgggaaatcaaaagcattgacagtgaa
gcaaagagttcccatgagaagacgatactgtcgctactctctgcttgcaagttagaagat
gcctgccaggaagcgcggaaggccggggaccattgtttggcgttgctgatggcgcaactg
cgaagtggcgcaatggtgaaaaagttgatcaagcagcagcttgcactgtggcaggagacc
gacgtagatgaaaatctcacaattgatcgtttgaaactgtttatgctagtagcgggcgag
ccgcttatctctagtaagcacggtaccatcaacgtgtgtgaggatctggactggaagcgc
gccttcgctatccatctgtggtacctatcgccgccgacctgttcgattactgatgccttg
gacctctacgaggcatcgttcaacacgacggaagcccaaatgtacactgcgatgcctgaa
cctgagtacagagagaatgattacgacgccgagttgagtaacggcaagcggatatatgat
ctctgctttcatctcttgaagttgtactgcactggaaatcacgatctgggcgagcttctg
aatccgttgtcgtacaccgctaatcccttagattacagattgagctggttgatgcaacaa
acacttgtggcattgggctacactcatctttctgaccatgttgccgcgttaacacatata
aattttgcgactcaactggaggcgcatggactttggcattgggcgatctttgtggtgttg
catctacgagattcgtctagacgtcgaactgccgtgcaaaatctgttgttacgtcatata
gaaatagacgataccccggaatacgtgaagcgcgagcagttcttaaaggaggagcttggt
atatcgtcagtttggattcatcaggctaaggccatcaaaagtagcattaataagagatac
ggcgaagcagcttggtactacatccaggcggaacaatggacccaagctcatgaaattatt
atagagcatttggcggctgatgctataataaatgaaaactacgattatttgaaatcattg
ttaagctcactaatagcagccgaatgtagcggcacaattagcggatggtcgcatcagggg
cagctcttgtgggagtacatggaaataactagcgagatccaaagtttgttgaagtctgat
ccggattattgtggactaacttatcaattggaggcgctgaagccacgattaacggacctg
tgtcataaaatcgatcaattcccgtgcccaactgctaaacacagattgtgccaggctgaa
attgcaaagagaactctacacttggctagaaacttgttgttgctgcagaagaacgaacag
agatccgtcacaaaactgttagtccgtttaatatctcagctacccttaccggaggattat
gcgcaacaagaactgcgacccattgttaatatgcgcgtagcagaagtaataccgtag
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