Solenopsis invicta (red fire ant): 105201712
Help
Entry
105201712 CDS
T03916
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105201712
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soc01009
]
105201712
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105201712
03029 Mitochondrial biogenesis [BR:
soc03029
]
105201712
Protein phosphatases and associated proteins [BR:
soc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105201712
Membrane trafficking [BR:
soc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105201712
Mitochondrial biogenesis [BR:
soc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105201712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
At4g13230
Motif
Other DBs
NCBI-GeneID:
105201712
NCBI-ProteinID:
XP_011168168
LinkDB
All DBs
Position
15:complement(1544721..1596285)
Genome browser
AA seq
1459 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERECGVVAAHQVLLMSGGECLEPTARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITHMFQTRAEQFQQAFVAYLAER
QQHMKLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQTSESTSEDSGEVLSLLRW
ISAKDNQSSLEQVAEQCSRGLEQFDERLMQALKAEVNAAIDNANKQDMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APQMYISAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTISTPDLSSITQFFLAKS
FTEGSTDGTKDKDTTSVSTDIPTKEQERTRAPLLSDRGDFESETDTEEFEKIGQAGVDVT
KPGAFDGTKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTTRSSTSSEPGSFQFP
SLSTTSERPVQLSPLTECVENGAADSSSCLLRSGANYRDALPLEEQHSLSPNPSSLPPSS
VMCDGQQQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQHQAIVS
LLQENLGNTREEVERLRTILRTMKAIVCEELSSVRSELVILRDQSNEDKSGIVEMTERVR
VALSLHSREYDRRLQEREQELTIEHEYKIADVKKLLQSREEEICTLKRNLLEKETELAEH
ERLVSTMHQKLDDEQIQSRNLQTRLHQELEEYSLILKEERIEREEEIKKTNDERFLEITS
LTNSLTQCQKRIQELEKNLATARNDQERMVKEATDKLQLEYKTELETIRSRFKLMTASTM
ERSPSDSSLEKIERTDVIELVNHEAILAQAREDMKIENAMAVRTAIEKERADCMAKLDNE
LRVAKEVVEEKNREIEMYRMRTAALMEQGKNYKSMIDRLIEEFELKSEVQQTLMEKTQMK
NLEADKAWPKSKETVEKVMRTVLEQNEDIAYPLESGICKDLSYDRLDAGQIDLEDFKESE
KYEVEVSESKKVRLEADDDDLARLSRRLESLENDNKRLSCELNSIRASKVAAEAKVEALM
TDKIRLEIELLKERTKRTFGIDSVSLESREKDMNASVAVVSDSNSSRDAATSPEPSRRSS
SKSICFHPSLSSCIHKKVAEKVTKMVQQGIVTITSCNPGDVVLVVWDAVHGNYAVYQESS
TFYFLHSDYVDALDVGMNPSGSRKCVLAEVIDKEYCHARKHENRYHVPRGTKFYRVRAKP
RDARALTDETCSMSKSQLP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgctctacatcttccacgttgataccggcaccaccatcaccttcgacatcaagctggca
ctgcaaagtgtcagccagctgatggaggcgatcgagagggaatgtggtgtggtagcggcg
catcaggtgctgctcatgagcggaggcgagtgcttggaaccaactgcacgtgtgtgctcc
tactcggctggaaccgacacgaacccgatctatctgttcagcaaggccgccattgagagc
agcctcccacccacgccgagtatagattacggttccgatgtcgacctgcagactcagatc
gacgcctcgctggcgatgccggccacctatcagaccctttgcgcacgtgctcacttggct
cagcagtgttgcggcctggcgcgagagcagacgagaatctgcgagaggctggttcacgat
cagcatcttcaacagcagggctgggccgcggtggtcgccaatctcgaggacataacgcac
atgtttcaaacacgagccgagcagttccagcaggccttcgtcgcgtacctcgccgaaaga
cagcaacacatgaagctcctcgataatttcagtgccgatcttggtactctggcgaaaatt
ccaattttgccggctttgagagcccaagccgaaggcttgttaagtccggacgatcaaccg
agtcaaacctccgaaagcacgtcggaggacagtggggaggtgctgagtctgctacgatgg
atctctgcgaaagacaatcagagcagcctggaacaagtggcggagcaatgctcgcgcggc
ctggagcagttcgatgaacgattgatgcaggccttgaaggcggaagtgaacgcggccatc
gataatgctaacaagcaggatatgaaggagatcaagggcctaggtgagaggctgtttgcc
ctggaacagctaatggtgcagaccaagaggctcgttcacgagcagggcgagcttgctcaa
ggtttcttgcagaatcagaatcgcgcgagcaatttgggcgacgcgagcgtcctgccagat
ctttgcaattctcaccggcggcaattgctcgtcatgttgcaaaatcacaaccagttacgt
gacatccgccgcagatgcacgaaggcgaaggaggagctttcggtgaacatctatcatcgc
ctgaagtggatcatgtacgtggagaacaagatggtggaagtgggcaacaaactcatcata
tatcacgagagcctgaagcgtttgcgacggcatctggaggtgctccaacagatccacttg
gctccgcaaatgtatataagtgccgtggttgaggttgttaggaggcgcaccttttcgcaa
gcgttcctcgtgtgggcgagcaatctggcatgtcagcttttgactgttcacagcgaagaa
ttggcgcgtaggcgagagtttcagagcaaattcgacggtcattttttgaataccctcttc
ccaggtctggaggacacgccaccgcccttcgcaacgcaagcaccttccgttttcgacaac
gggctacccaagttgaccgcggacgatatggagtcattgagatcgcaacttccggatttg
gcgcttacgatttctacgccggatttgagcagtatcacacaattcttcttagccaagagc
tttaccgaaggcagtaccgacggcacgaaggataaggataccacatcggtgagcacagat
attcctacgaaggaacaagaacgcactagagcgccgttgttgtccgacagaggcgacttc
gaatccgaaactgatacagaggagttcgagaagatcggtcaagccggcgtggacgtgact
aagcccggcgcattcgacgggacaaaacagaagcggcagaagcaattggaggttggtgcc
tctcgaagcgtgtcccccgcttcttcgacctcgactaacgtctccccactaaactcgaaa
gtcgcggacttaactacgcgttcgtccacgtcaagcgaacccggctctttccaatttcct
agtctatccaccacgagcgagcgtccggtgcaactaagtccgctgaccgagtgcgtggag
aatggcgcggccgattcttccagttgcttgcttcgcagcggcgcgaactaccgtgacgcc
ctgccgctcgaggagcaacattccttgagtccaaacccttcctccttgccaccgtcctct
gtcatgtgcgacggccagcaacagcaacaccagcatccgctgtccggtagcggtggtagc
agtccctccgtcggcgtgggtgctaccgacttcatgggtaccgagttttacatggacgaa
tccttgccgagcagcctcagtgagcatcccgccgacggccagcatcaggctatcgtgtcc
ctccttcaggagaatctcggtaacacgcgcgaggaagtggagaggttgcgaactatcctg
aggaccatgaaagcgatcgtatgcgaggagctcagctccgtgcgaagtgaattggtgatt
ctgcgagatcagtctaacgaggacaagagtggcattgtcgagatgacggagcgcgtacga
gtggcgttgtctttgcattcgcgcgagtacgaccggcgtcttcaagaacgtgagcaggaa
ctgacgatcgagcacgagtacaaaatagcagatgttaagaagctgttgcagagtcgtgag
gaagagatctgcacgctcaagcgtaatctcttggaaaaagagaccgaattggcggaacac
gagcgactggtgtctacgatgcatcaaaagttggatgacgagcagatccagagcagaaac
ttgcaaactcgtctacaccaagaactcgaagagtactcattaatactgaaggaagagcgc
attgagagagaggaggaaataaagaaaacaaatgatgagagattcctcgagatcacttct
ttgacgaattcattgacgcaatgtcagaagcgaattcaagaattggagaagaatctggcc
actgcgcgcaatgatcaggaaagaatggtgaaagaggcgaccgataaattgcagttggaa
tataaaacggagttggaaactattagaagtcgcttcaaacttatgaccgcttctaccatg
gaaagaagtcccagcgattctagtttagagaagattgaacgaacagacgttatcgagctc
gtgaatcacgaggcgattctggcgcaagcaagggaagatatgaaaatcgagaacgccatg
gcagttcgtactgccattgaaaaggaaagggccgattgcatggcaaaattggataatgaa
ttaagagtggcaaaggaagtagtcgaagagaaaaatagggaaattgaaatgtacagaatg
agaacagccgcgctgatggaacagggcaaaaattacaagagtatgatagatcgattaatt
gaagaatttgaactgaaatcggaggtgcagcaaaccttgatggagaagacacagatgaaa
aatcttgaagcggacaaagcgtggccgaagagcaaagaaactgtagaaaaagtaatgcga
acggtcttagagcagaacgaagatattgcgtatcccttagaatctggaatatgcaaagac
ttaagttacgaccgattggatgccggtcaaattgatctggaggacttcaaggaaagcgaa
aagtatgaagttgaggtttcggaatcgaaaaaagtacgattggaggctgacgacgatgat
ctggctcggctatcgaggcgacttgaatctcttgaaaatgacaataagaggctgtcctgc
gagctgaattcgatacgcgcgagtaaagtggcagctgaggcaaaagtggaggcattaatg
acggataaaattcgtttggagatcgagttgctgaaggagcgaaccaagaggacattcggt
attgactcggtatccctggaaagccgtgaaaaggatatgaacgcgtcggtcgcagtggtt
tcggactcaaattcgagtcgagacgcggccacgagtccagagccgagtcgacgatcatct
tccaaatcgatatgcttccacccctctctttcctcatgcatacacaagaaagtcgcggaa
aaagtaacaaagatggtgcagcaaggaattgtcaccatcactagttgcaatccaggcgat
gttgtgcttgtagtctgggacgctgtacacggcaactatgcggtgtaccaggaatcctcg
actttttattttcttcattcggactacgtagatgcactggacgtagggatgaatccgagt
ggttcccggaagtgcgtcctcgctgaagtaatcgacaaggaatactgtcatgcgagaaag
cacgaaaatcggtatcatgtcccacgtggcacgaaattctacagagtgcgcgccaagccg
cgagatgcacgcgcgttgacagacgagacctgttcaatgtcgaagagtcaactaccgtaa
DBGET
integrated database retrieval system
