Solenopsis invicta (red fire ant): 105201822
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Entry
105201822 CDS
T03916
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105201822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201822
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105201822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Ras
Motif
Other DBs
NCBI-GeneID:
105201822
NCBI-ProteinID:
XP_011168337
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All DBs
Position
9:17241157..17245863
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AA seq
693 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDEPSLATNEEKHNLSELERAKLISCLETIRNVIGETVSDSKLKEKIILSNFDAN
TALDAILKESSPKKDTDPVGNKKQLERHPGSKSSSKPALQVTTPSTVKVVPTGTKPVVKG
FDLSGVENTDLLSPRCGSPSSNRNSPEIKRKEDIVQKEKRAISSKTNSPRCQSPVSGHVT
PELDSKVKSNTSEDKADIEAIYKSKRGDSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVS
QRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPGH
KDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNKL
DTVNWSKDRFNEIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPTL
VNVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLGDKVLILPQNEIAV
VKGLQSDEVSMTNAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPVTTCFQAHVVIFAI
AKPITKGLPVVMHQQSLVQPAVITKLIAQLHRSTGDVIKKKPRCLPKNSSAIIEVVTQTP
VCMELYKDIKQLGRAMLRLEGTTIAAGLITKIL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgtccgctctatgaattactccgacgagtacgatggttatgat
gatgtttatggacattcagtagaggacgattattgtgtgtcacctagtgtggagcagttt
ttattcgatcgaagcaaacaacagaatattgcttcgttcatcacagaaccagatatagtg
gaggacaatgaagatatcgatgagccttcactagcaaccaatgaagagaaacataacctt
tcggaattggaaagggcaaagttaatatcttgtttggaaacaattagaaatgttataggg
gagacagtatctgattctaaattaaaggagaagattattctgtcaaattttgatgcaaac
acagcacttgacgctattttgaaggagtcgtcgccgaaaaaagacactgatccagtgggg
aataagaaacaattggagaggcatccaggtagcaaatcatcatcaaaacctgcgttgcaa
gttacaacaccgtctaccgtaaaggtcgtaccgactgggacaaaacctgttgtgaaaggt
tttgatttaagtggtgtagaaaatacagatttactgagtccacgttgtggaagtccgtct
tccaaccgaaatagtcctgagatcaaacgcaaagaagatatcgtacaaaaggagaaaaga
gcaatctcatccaaaacaaatagtccaagatgtcagtcaccagtatcaggccatgtaaca
ccggaattagattccaaagtaaaatctaatacatctgaggataaagcggatatcgaagcg
atatacaagagtaaaagaggcgacagcaaagaacagcttcacttggtggttgtgggacac
gttgacgctggaaaaagcacattgcttggacgactgctctgtgatttgggtcaagtgtca
cagagacttatccataaatatcaacaagaaagcaagaagataggaaagcagtcgtttgct
tatgcttgggtactcgatgagactggtgaagaaagagagcgaggaataacaatggacata
ggccactccaagtttgaaacagacacaaaatctatcactctcctagatgcacctggccac
aaggattttattccgaatatgataaccggcgctacgcaagcagatgtagctttattggta
gtcgatgcaaccagaggcgagtttgaaactggatttgatagtggaggtcagacgcgcgaa
catgccctgttattacgatctttaggagtatcgcaattagcggtagttgtcaataaacta
gatactgtaaattggtctaaagacagattcaatgagatagtagacaaaatgagtgtattc
ctgaagcaagctggcttcaaagatactgtcacttttgtaccttgtagcggtttatctgga
gagaacattgtaacgaaaccaaaggagcagctctctaattggtataccggacctactcta
gtcaatgttatcgataatttcaaatgcccagagcgacctataaataaaccattccgtttt
tcggtaaacgatatatttaaaggtactggatctggattctgtgtatctggtcacgttgaa
actggtatggtatccttgggtgataaagttttaatactacctcaaaatgagattgcagtt
gttaaaggtctccagtcggacgaagtttcgatgacaaacgcgttcgccggtgatcacgtc
gcgttgacattagcgggaatcgagcagcaaaatgtgggtatcggcgacattatttgtaat
ccgcaaaatccggtacccgtaacgacctgttttcaagcgcacgttgttatattcgcgata
gcgaaaccgatcacgaaagggcttccagttgtgatgcatcagcaatctttggtacagccg
gcggttatcacgaaattaatagcgcaacttcatcgaagtactggtgacgtgatcaagaag
aagccgcgttgcttaccgaagaattctagtgcgattattgaggtcgtaacgcagacacca
gtctgtatggaattgtataaggatattaaacagctaggtagagctatgttacgtttagaa
ggtaccaccatcgcagctggtttgattacaaagattttgtaa
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