Solenopsis invicta (red fire ant): 105201883
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Entry
105201883 CDS
T03916
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105201883
03036 Chromosome and associated proteins [BR:
soc03036
]
105201883
Transcription factors [BR:
soc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105201883
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105201883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-C2H2_jaz
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
105201883
NCBI-ProteinID:
XP_011168454
LinkDB
All DBs
Position
9:15281006..15288721
Genome browser
AA seq
723 aa
AA seq
DB search
MSNVAAIKLEEGQESVTEIQTYLETFNKEIEGGQGELQHVQLQQVEGLSGGEEGGTYFVD
QSGQYYYQANSDEPPVMTQVQIQEVEETDVQNEDETAQDEYQEIEELENAEGDEDAQVNG
DNNQVVINSGDAYQTVTIVPSDTNPGEVSYVLIVQQPETEEKESKPVEDEATTVAAAAAA
EEEEAEGEQDLTVYDFQDNEDNEAPVESEAEDDKTKIIKFLPKKSQTVTQAHMCNYCNYT
SPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKYCESAFTTS
GELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKL
KRHLRIHTGEKPYECDFCQARFTQSNSLKAHKLIHNVGDKPVFQCELCPATCGRKTDLRI
HVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHML
IHTDQKPYQCDHCFQSFRQKQLLKRHCNLYHNPSYVPPPPQEKTHQCPECERAFRHKGNL
IRHMAVHDPESSLQEKQQALKIGRQKKIQIIDGQRVEVMTGDLASKLKGYEDEEEEEDED
DMMAVQGSDGQQYVVLEVIQLADNQGTDQMAVVANEDGELVMQDPLTQENSIVTGTGDEI
DEVDEEDIEMHDLKIEPSTPSKSTQNSQNDPKLQKEMETCFGFDEEEEEEESGNNINMLQ
TIS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtagcagctataaaattggaagagggacaagaatctgtcaccgaaatacaa
acttacttggaaacgtttaataaagagatagagggaggacaaggtgaattacaacatgtg
caattacaacaagtggagggcttatctggtggagaagagggtgggacatactttgtcgat
cagtctggtcagtattattaccaggcaaatagtgatgaaccacctgtaatgacacaagta
cagatacaagaagtggaagagactgatgtacaaaatgaagacgagacagctcaagatgag
tatcaagagattgaagaacttgaaaatgccgagggcgatgaggatgcacaagtcaacggt
gacaacaatcaagttgtaattaattctggcgatgcatatcaaactgtcacaattgtacca
tctgacacaaatcctggagaagtaagttatgttttaatagttcagcaacctgagactgaa
gagaaagagagtaaacctgtggaagatgaagcaacgacagtagcggcagcagctgcagct
gaggaagaagaagcagaaggtgaacaagatctcactgtatacgactttcaagataatgaa
gacaatgaagcgccagtggaatctgaggcggaagatgacaagactaaaatcattaagttc
ctcccaaagaaatctcaaaccgtgacgcaagctcatatgtgcaattattgcaattatacc
agcccaaaacgatatcttttatcacggcatatgaaatcgcattcagaagaaagaccacat
aaatgtagtgtttgtgagcgagggtttaaaactctggcctcgcttcagaatcatgttaac
actcatactgggaccaagcctcatcattgcaaatattgcgagagtgcatttacaacttct
ggtgaacttgtaagacatgttcgatatagacatacccatgaaaaaccacataaatgtcat
gagtgcgattatgcatctgttgagctgtcaaaactgaaaagacatattagatgccacaca
ggcgaacgaccttatcagtgtccacattgtacatatgcaagtcctgatacatttaaactg
aaacgccatcttcgcatacacactggagaaaaaccatatgaatgtgatttttgtcaagcc
agatttactcaatccaatagtttgaaagcgcataaattaatacataatgtaggcgataaa
ccagtatttcaatgtgaattatgcccagctacatgtggcagaaaaacggatcttagaatt
catgtgcaaaagttacatacttctgataaaccactaaaatgcaaacgttgtggaaaaaca
ttcccggacagatatagctacaagttacatagcaaaactcatgaaggagagaaatgttac
aagtgcgatctatgtccgtatgcatctatatcggcacgtcatttggaaagtcatatgctt
attcatactgatcaaaagccgtatcaatgtgatcactgctttcaatcatttagacaaaaa
cagttactcaaacggcattgcaatctctatcataatccctcttatgttcctccaccgcca
caagaaaaaacacatcaatgtcccgagtgtgaaagagcatttagacataaaggtaatctt
attcgtcatatggctgttcacgatccggaatcatctctgcaagaaaaacagcaagctctt
aaaatcggcagacagaaaaagattcaaattattgatggccaacgtgttgaagtaatgaca
ggtgatttagcttctaaacttaaaggttatgaagacgaagaagaagaagaagatgaagat
gacatgatggcagttcaaggcagcgatggccaacaatatgttgtgttagaagtgatccag
ttagctgataatcaaggaactgatcagatggctgttgtcgcgaatgaggatggagagttg
gtaatgcaagatcctttaactcaagaaaatagtatagtaacaggaacaggagacgaaatt
gacgaagtagatgaggaagacatagaaatgcatgatctaaagatagaacccagtactcca
tcaaaatctacacagaactcacaaaatgatcctaaattgcaaaaggaaatggaaacctgt
ttcgggtttgatgaggaagaagaggaagaagaaagcggtaataatataaacatgttacag
acaatttcgtaa
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integrated database retrieval system
