Solenopsis invicta (red fire ant): 105201895
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Entry
105201895 CDS
T03916
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X2
KO
K14296
nuclear pore complex protein Nup153
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105201895
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105201895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201895
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105201895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DUF7129
Temptin_C
Motif
Other DBs
NCBI-GeneID:
105201895
NCBI-ProteinID:
XP_011168476
LinkDB
All DBs
Position
9:complement(15084986..15092937)
Genome browser
AA seq
1554 aa
AA seq
DB search
MPREGGNPAGRRPSSRNAKPYDVNNSFVRKVATKVTDFIPQSSWISKWFNTSQGNEDALD
GTENIVETELEDDAQQPPPSKRARIRMDVIHPPGTFSIQSRVKTALNTVEPSKGQYPVNN
DMTEDFLEPATAGPSGISRLISSTPAVQTDIRTVTSHRSDLNSLTSSTNNGIANGMDDNS
ESSESTSGCSSLIPQINRHEGSSNLLYSSTFTSRKRHVDDKLTFTNHLQSPRSLFLDSNS
RDTLSSRRPSFNASIVTNAADRASPLSSPFYSGNITFGGANAAGLYKRSQNIFNTSNDIQ
LKVPRRTNVEVKPSDGVDSSGMSQTAKKILEALEHFSSPVSDAKKIPLKNTSMSSATTKK
RAREEIVNPSARIGLRHLTRELTVPTVPDILKLRRRQKLQDTTLMARKIVSARSDPPPPP
QEYRLRREDTDNEKYRGKLKGKSKINLEQEETVAPVNLPNIPLPITTLPNFNFTLSPPAS
HSAGKTVANKENTFTFASPIKVTDAGRSLQSVNNFTFSNPIDAEVCTNTNATNSNLPSTT
ENEFTVDCAITSVPNFIWSGSSTAPRLKAKVKNSKDDSVGSAMSQELKSGNIIDAFSSKS
NKMESNFIGQPNSGLTFETTDKTTSTFAGSDFDITRTQGMESWECSECMIRNSGADKQCT
ACKISRPDPNEKTSSPTTDTIVETKPIAQDCFGSQFKLSSNQWECATCSVRNKQNDTTCV
ACTAPKPGNSFTMQQPVKSQNFNLMEKFKPTEGSWECSGCLLSNAANVITCPCCNTSKPI
IVKTKPKTDNVTELSVQKLDTSTEVRTTQEISNNSEIMNKFKPSKDSWECPGCLVRNNNS
VTSCPCCSTPKPNSTGEPSKAEQTSSNGFGDKFKKPEGAWTCDTCMLQNDSKNMECVACQ
ALKPGTVKSNESSSNTSSTLQFKFGVPQTCTTNSSGPHGFKFGIDKTDSQSKSDATSPLN
GFKFGSAQQNSGMAQFTFGIPKEQNKAVSEEFKTVTTSSSSTGFLFNMKNPEKPEYTNQN
QETKQEILFGMPKNDNLITASEKQNINVVSSAPPTAPSTVLSTVSSFTFGVQKPGFNQSD
SNKEVQKTSFVTTVTESSKPVVTTDTVPISTNTTLPSLLTQKDTTTNISDAKPKPIFSFG
VQSSISTVTTTSTNATTTCLPTFAQPTFTFSNSKTSSQPTTIPSFGQIPTSSASLSTNVS
FAGNKVTETTPSTNKTVNDTSAAIPLFPSATPLFNNESKVITFGTYKPSFTATGDKPLGY
ATPENKVPTFGSNTENKPSIFGTPETKLPAFNSPAANPLSTFGTPSNNATSIPFGSANAP
AFGSNTTSAFGGTTTTPTIFSTTKPSETTVANPSLFTFGSTSSQQSASGGFNFSANINPA
TSSSAKSLFTFGNNSSTPQSNNNTFGSGTFGANSASTNTANFTFNPPKQETPAAFGQGAV
ATPMFGTPQATPQTQATSSFSSTPSSSTGFNFGSAAPGATPSGGFNFGGMPSTSASTGGF
NFNSASTPAVAFDPNSRPSFNFTKGSAPTAFNAPPQSATAPPRKIKKAFRRCAR
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggaaggcggcaatccggccggcaggcggccgtcgtcgcgcaacgcgaagccc
tacgacgtgaacaactcttttgtaagaaaggtggcaaccaaggtaacagattttatacca
caatcctcatggattagtaagtggttcaatacctctcaaggtaatgaggatgcgttagat
ggtacagagaacattgtggaaacagagcttgaggatgatgcgcagcagcctcctcctagc
aaacgagcacgtattcgtatggatgtgatccatccacctggcacattttctatacaatcg
agagttaaaaccgcattgaatacagttgagccctctaaagggcagtatcctgttaataat
gatatgacagaagattttttggaacctgcaacagctggtccaagtggaataagccgttta
atatcctcaactcctgcggtacaaacggacattaggactgtaacgtctcacaggtctgac
ttaaattcgctaacttcgtcgactaataatggaatagcaaatggcatggatgataattcg
gaatccagtgaaagtaccagtggttgcagttcacttatcccacagataaataggcacgaa
ggctcatcaaacttgttgtatagttcgacttttactagtagaaagaggcacgttgatgat
aaattgacatttactaatcatttacaatctccaaggtccttgtttctagacagtaattct
cgtgatactttaagcagtcgcaggccgagttttaacgcatcaattgtaacaaacgctgca
gatcgtgcatctccactatcttctcctttttatagtggtaatattactttcgggggtgca
aatgcagcgggtctttacaaacgaagtcaaaatatttttaacacttcaaacgatatacaa
cttaaagtaccaaggagaaccaatgttgaagttaaaccttccgatggagtcgattcatcg
ggtatgagtcaaaccgccaaaaagatactagaggcattagaacatttttcgtcgcctgta
tctgacgcgaagaaaatcccgttaaagaacacgagtatgtcttcggcaacgactaaaaaa
agagcgcgagaagaaatagtaaacccctccgctagaattggtttgcgtcatttgacgcgc
gaattaacagtaccaaccgtccctgatatattgaagttgaggcgaaggcaaaagttacaa
gatacaactctcatggctagaaaaatcgtttctgctcgtagcgatccacctccgcctcca
caggagtatcggttgaggagggaagataccgataatgaaaagtaccgcggcaagttgaag
ggcaagtctaaaataaatttagaacaagaagaaacggtagcgcctgtaaatttgccgaac
atacctttgccaataacgacattacccaatttcaattttaccctatcacctccagcttca
cattccgcaggcaaaactgtagcaaataaagaaaatacttttacatttgctagccctatc
aaggtgacagatgctgggagaagtttacaatctgtcaacaatttcaccttcagtaatcca
atcgacgctgaagtctgcacgaatactaacgcgactaattcaaatttgccttcaacaacg
gaaaatgagtttactgttgattgtgcgatcacatccgtaccaaatttcatttggagtggt
tcatccacagcacccagattaaaagccaaagtgaaaaacagtaaagatgattccgttgga
tccgcaatgtcacaggaattgaaatcaggaaacattatagatgcattctcttccaaatct
aacaaaatggaatctaattttattggacagccaaattcgggattgacttttgaaacaact
gacaagactaccagtacattcgctggctcagattttgatatcacccgcacacagggtatg
gagtcttgggagtgtagtgaatgtatgattcggaacagcggtgcagacaaacagtgtact
gcatgtaaaatttctcggcctgatcctaatgaaaaaacttcgtcgccaacaacggataca
attgtagaaacaaagccgattgcacaggattgctttggttctcaatttaaactgtcttca
aatcaatgggagtgtgcaacttgctccgtaagaaacaaacagaatgacactacatgtgta
gcgtgtactgcaccaaaaccaggaaatagttttacgatgcaacaacctgttaaatctcaa
aatttcaatctaatggagaagtttaaacctaccgaaggatcatgggaatgttccggttgt
ttactaagcaacgccgcgaacgttattacgtgtccttgttgcaatacatccaaacctatt
attgtaaaaacaaaaccgaagactgataatgtcacggagttatctgtgcaaaagttggat
actagtacagaagttcggacaacgcaagaaatatctaataattctgaaataatgaacaaa
tttaaaccaagcaaagattcctgggaatgtccaggatgccttgttagaaataacaattct
gtcaccagttgtccttgctgtagcacccctaaacctaattctactggcgagccaagcaaa
gcggaacagacatcgagtaatggatttggagataaatttaaaaaaccggaaggtgcatgg
acttgcgatacttgtatgctacaaaatgattcaaagaatatggaatgtgtggcttgtcaa
gctttgaaacctggtactgtaaaatcaaatgaatcttcatcgaataccagctctaccttg
cagtttaaatttggtgtaccacaaacttgtacaacaaattcaagtgggccacacggattt
aagtttggcatagataagactgacagtcaatctaaatccgacgcaacatctcctttaaac
ggattcaaatttggtagtgcacaacagaatagtggtatggcacaatttacatttggtatt
ccaaaagaacagaataaagctgtaagtgaagagtttaaaactgtcacaacatcttctagc
agtacaggatttctattcaacatgaaaaatcctgaaaaaccagaatataccaatcaaaat
caggaaactaaacaggaaatactttttggcatgccaaaaaatgataatttaataacagca
agtgagaaacaaaatataaacgttgtgtccagcgctccaccgactgctccatcgaccgtt
ctatcgactgtttcttctttcacctttggtgtacagaaaccaggatttaatcagtctgat
tcaaataaggaagtacaaaaaacttcctttgtaaccactgtaacagaaagctccaagcca
gtggtaacaactgatacggtaccaattagcactaatacgacgttaccgtcgttattgaca
caaaaagatactacaacaaatatatcagacgcaaaaccgaagccgatattttcattcggg
gtacaaagcagtataagcactgttactacaacttccacgaatgcaacgactacttgtctt
ccaacttttgctcaacctactttcacattttccaattcaaagacgtcatctcagccaacc
acaataccgtcttttggtcaaattccgacgtcatccgcctcgttgtccacgaatgtgtcg
tttgcaggaaacaaggtaactgagactactccatcaactaataaaaccgtgaatgatact
tcagctgctattccactcttcccgagtgccacaccgctattcaataatgaatcgaaggtg
ataacattcggcacgtacaaaccgtcgtttactgcgacgggagataagccgttaggatat
gctacacccgagaacaaagttccaacgtttggcagtaacaccgaaaataaaccatcgatt
ttcggtacaccggaaacgaagttgcccgcattcaattcacccgcggcaaaccctctatca
acgttcggcacgccgtccaacaatgctacttcaataccctttggctcggctaatgccccg
gcttttggaagtaataccacatccgctttcggcggtactacgacaacacccactatattc
tcaaccaccaagcctagtgaaactactgttgcaaacccgtctttattcacgttcggttcg
acttcgtcgcaacaatcggcaagcggtggatttaacttctccgcaaatattaatccggct
acgtcgtcgtccgcgaaatcgctcttcacgttcggtaacaattcaagtacgccgcagagt
aataacaatacgtttggtagtggtacatttggagcgaactccgcttcaacgaacactgcc
aattttacgtttaatccacctaaacaagaaacaccggcggcatttggtcaaggcgcagtg
gcaactccgatgttcggtactccacaagcaactccgcagactcaagcaacatcgtcattt
tcgtctactccttcatctagtacaggattcaattttggatctgcagctccaggtgctacg
ccatcaggaggttttaattttggaggaatgccgtctacatctgcgtcaaccggaggattc
aattttaattctgcttctactcccgcggtagcttttgacccaaatagtcggccttcattc
aattttaccaaaggaagtgcaccaacagcatttaacgctccacctcaatcggcaacagca
ccaccacggaaaatcaaaaaagcatttcgaagatgcgcgcggtag
DBGET
integrated database retrieval system
