Solenopsis invicta (red fire ant): 105201963
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Entry
105201963 CDS
T03916
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105201963
03015 mRNA surveillance pathway
105201963
03008 Ribosome biogenesis in eukaryotes
105201963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105201963
03009 Ribosome biogenesis [BR:
soc03009
]
105201963
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105201963
mRNA cycle factors
Stress granule specific factors
105201963
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105201963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
105201963
NCBI-ProteinID:
XP_011168570
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All DBs
Position
1:complement(26985414..26996495)
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AA seq
639 aa
AA seq
DB search
MPKKSNKWGGRGNMRGNEDKAYFGHDDRVGRNVGRSGGTHTGPTKHRVSFKTLRPNNRDI
RNLALANLDEDIPMIGSSNNNTRQVVINQRDRHRGDRAWGSVSRGRNSPMPNRNFKGGQA
GSRMRPSISESNWHRVLIPYGHKYEKDYVINTLLNYIAPEVFVPLTYKITENDASFYVDD
YKIASTLANCDRKITMSDGFKLLVKLKPGFPSCDIDDKLKERLKQAMVKRYVQETNALDL
SKFHLDPELYSDYFCALASPAMFMTVMDIVGEHIPNLEALNLEGNKLQNIERLSVLCKKF
SKLKILYIGDNKIRSIHQLDIIKDLKLVELKLTGNPFCNKYKSRQNDYVGDVRRRFPKLL
RLDGIELPRPIVFDVVDDAAKIPSSQRMFVTNAKVQEIASQFLQQYFIIFDSDNRQPLLD
AYDEHACFTITTSPNNKLQGYLMENRNLFRITDTIKRQKLLKQGRLPVVSFVSEMPRTKH
LLNTFTMDISLATQTMMFITITGYFQEVDNKDEPIRYFNRTFIIVPEGGGYCIRNEQLHI
SQPTEAQLKQLHQQLSQLNNQQTQLTTPALESIETKPMATELSDDIKQQMTMTLSQHTNM
NLEWSLKCLQETQWNYDNALSAFQEFYKRGQIPPEAFTK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatcaaacaagtggggtggtcgtgggaacatgcgaggaaacgaggacaag
gcttacttcggtcacgatgatcgtgtaggaagaaacgttgggagaagtggtggaactcat
actggccccaccaagcatcgtgtttcatttaaaactcttagacccaacaatagggacata
cgtaatttggcgttggcgaatttagatgaggatattccgatgatcggtagttccaacaat
aatacgaggcaggtggtaatcaaccagagagatagacataggggtgacagggcatgggga
tccgtatctcgtggaaggaacagtcctatgccaaatagaaatttcaagggaggtcaggcg
ggctctagaatgcggccttccattagcgaatccaattggcacagagtcttaataccatat
ggtcataagtatgaaaaggattatgttataaatactctcttaaattatatcgcacctgaa
gtatttgttcctttaacatacaagataacagaaaacgatgctagtttctatgtggatgat
tataagattgcaagtacattggcaaattgcgatcgcaagattacgatgagcgatggattc
aaactgctagtaaagttaaaaccaggatttccatcctgcgacatagatgacaaattgaag
gaacgattaaaacaggcgatggttaagagatatgtacaggaaacgaatgctttggatttg
tccaaatttcatcttgatcctgaactttattctgattacttttgtgcattggcctctcct
gctatgtttatgactgtgatggatattgtaggagaacacataccaaatttagaagccctt
aacctggagggtaataagttgcagaacattgagaggcttagtgtgctatgtaagaagttt
tccaaattgaagatactttatattggcgataataagattagaagcattcatcagctagat
atcattaaggatctgaaattggttgaattgaagttaactggaaatcctttctgtaacaag
tataaatctcggcaaaatgactatgttggcgatgttcggagaagatttcctaagctgctg
cgtttggatggcatagaattgccacgaccgattgtcttcgatgtggttgacgacgctgcc
aagattccctcgtcacagagaatgtttgtcaccaatgcaaaagtacaagaaattgcgagt
cagttcttacaacagtatttcataatatttgatagtgataaccgacaacctctacttgac
gcatatgatgaacatgcatgctttacgataaccacttctcccaataataagttacaaggg
tatcttatggaaaatcggaatttattcagaataacagacacgattaaaagacaaaaatta
ttgaaacaaggtagattgcctgtagtttcctttgtgtcagaaatgccaagaacaaaacat
ttattgaatacctttacgatggacatctctcttgctacacaaacgatgatgttcatcaca
ataacgggctatttccaagaagtcgataacaaagacgagcccatccgctacttcaaccgg
acattcataattgttccggaaggtggaggatactgtattcgaaatgagcagttgcatatt
agtcagccaactgaggcgcagctgaagcaactgcaccaacaattaagtcaactaaacaat
cagcaaacccagctgacgacgccagcgttagaatctatagagacgaagcctatggcaacg
gagcttagcgacgatataaaacagcagatgacaatgacattgagtcagcatacaaatatg
aatctggaatggagtttgaagtgcttgcaagagacgcagtggaattacgacaacgcttta
tctgcctttcaagaattttataagcgtggacagataccgccagaagcatttacaaaataa
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