Solenopsis invicta (red fire ant): 105202226
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Entry
105202226 CDS
T03916
Name
(RefSeq) histone deacetylase 6 isoform X3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soc01009
]
105202226
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105202226
04131 Membrane trafficking [BR:
soc04131
]
105202226
03036 Chromosome and associated proteins [BR:
soc03036
]
105202226
Enzymes [BR:
soc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105202226
Protein phosphatases and associated proteins [BR:
soc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105202226
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105202226
Membrane trafficking [BR:
soc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105202226
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105202226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
C1_2
zf-UBP_var
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
105202226
NCBI-ProteinID:
XP_011168935
LinkDB
All DBs
Position
13:2227422..2237109
Genome browser
AA seq
1173 aa
AA seq
DB search
MTESTVNLDLFTAAKQLADSEIELLKVIENSSKCQRTATNMLTANTKKMKKPGKSKNAHP
SAALLAAKQEAVRRQLSDKKSNNNFIPDIYQRVIDTYKTMRKETGLVFDRSMAEHECIWD
PNYPECPARFTRVLQRCEELGLVQRCRLIEPRLAAESELLSKHSQKQIDILKATDGSTDF
ENLELLSSKYDCVYIHPSTYRLSLLAVGSTTNLVESVCKGEIQNGMAIIRPPGHHAMKSE
YCGYCFFNNVALAAEKALSSGLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHG
EFWPNLRESDFHYVGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIV
SAGYDAALGCPEGEMLITPACYSHLLSSLLSLANGKVAVILEGGYCLKSLAEGAALTLRT
LLGDPCPILQTLDLPSLSIRETILNVIYAHKPYWKCYQYQDTYSINNITHNKEEIANRHV
VMVTYKGNEVKLDKYDTRNCYPVQSKETLETVEKKLNELIQLTNLRKAPHRVCIVYDEKM
QKHCNVSDNSHPEKPSRISSIYKNHEEHGVLQRCHLLQGRSATIEELALVHSKDYIDDIK
QTSTLKFKELDKQASDYNSVYLHTETWSSACMSTGSLLQVVDAVLNGECQSGVAIVRPPG
HHAEKDNACGFCIFNNVAVAAMYAVQFHLVKRVLIIDWDVHHGNGTQSIFEEDPRILYVS
VHRYDNGSFFPNSKIANYTNVGLNAGEGFNVNIPWNKKGMGDAEYIAAFQQVVMPIAYQF
NPELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLSSLANGRIILSLEGGYNINSISHA
MTMCTKTLLGDPLPMLDPSLIPCTSAINSINNVLRTHKKFWSNLQYGMSLPKEKVLPKLK
TVPNKHEEQGRNADKPKQMEPKIALEGIESEKLELNLAIDKNCLNLVTDEEISKLTCEVE
NIKIKNFELHTMKSEAIEAKRNPELKQNEAKNLDVSQSIHKCVNETNQSRDNQQGDSNIR
EDRDDQAASSSQRGTQATTLSEYLSENLRALNAGEMFAVYPLQDCPHLVTLNDVPPGGIN
VNVPCVECDRTEENWICLQCYTVHCARNINRHAMEHAEEHEHPLTLSFSDISVWCYGCEA
YIDNPRLYAARNAVYQSKFNEELPWTYSESRTE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctacagtgaatctagatttgtttactgctgctaaacaactagcagacagc
gaaattgagctgttaaaagtgattgagaactccagcaagtgccaaagaactgctacaaac
atgttaactgcgaatactaagaaaatgaagaaacctggaaaatcgaaaaatgctcatcca
tcggctgcgctattagccgctaagcaagaggcagtcaggcgacagttatcagacaagaaa
tccaacaataattttataccagacatatatcaacgagtgattgatacgtacaaaacgatg
cggaaagagactggtctcgttttcgatcggagcatggccgagcatgagtgcatctgggat
ccaaattatcctgagtgcccagccagatttacgcgagttttgcaaagatgtgaggagctg
ggtctcgtgcagcgatgtagactcattgaaccaagactcgccgcggagagcgagcttttg
agcaagcacagtcagaaacagattgatatcttgaaggcaacggacggttctacagatttt
gaaaatttggagttgctctcgtctaagtacgactgtgtctacatccacccgtctacttat
agattgtctttattagctgtgggctcaacgaccaatttagtagaaagcgtctgtaaaggc
gagatacaaaatggcatggctattatcagaccacctggtcatcatgcaatgaaatcggaa
tattgcggttactgctttttcaacaatgtagctttggcagcagagaaagctttaagttca
ggtttggcgaatagaattttaattgtagattgggatgttcatcatggacaagcaacgcaa
caaatgttttacaatgatccgcgtgtagtttacttttcgatacatcgttacgagcatggc
gaattctggcctaacttgagggaatctgattttcattatgttggagaggacctcggcgag
ggttacaactttaacattcctttaaataaaaccggcatgactaatgccgattacatcgcg
attttccagcaagttttattaccaatggcttacgaatttcaaccggatttgataatagta
tcagcaggttacgatgcggctctgggttgtccagagggtgaaatgctgataactccagca
tgttattcacatttactgtcatcgttattaagtctggcaaatggaaaagtcgccgtgatt
ttagagggtggttattgcctgaaatcattagcagaaggtgcggcattgactttaagaact
ttattaggcgatccatgtccgattttacaaacacttgatttaccatcgttaagtatacgt
gagactatcttgaatgtaatctacgcgcataaaccatactggaagtgttatcagtaccaa
gacacatacagcatcaataatataacacataacaaagaggaaattgccaatcgacatgta
gtcatggttacatacaagggtaatgaagttaaactggacaagtatgacactcgaaattgc
tatcctgtacaaagcaaagaaacgttagagactgtggagaaaaaattgaatgaactgata
caattaacgaacttgcgtaaagcaccccatagagtatgtatcgtctatgatgaaaaaatg
caaaaacattgcaacgtttctgacaattctcatccagaaaaaccaagtcgcatctccagc
atttataagaatcacgaagaacatggcgtattacaacgatgccatttattacaaggaagg
agtgcaacaatagaagagttagctttggtccattcaaaagactacatcgacgacattaaa
cagacatcaactttaaaattcaaggaattagacaagcaagcttcggattacaattccgtt
tatcttcacaccgaaacgtggtcgagtgcctgcatgtccaccggctctctgctgcaagta
gtggacgcagttttaaatggagagtgccaatccggagttgctatcgtgaggccgcctgga
catcatgctgaaaaagacaatgcgtgtggtttttgtatatttaacaacgttgccgtggct
gcaatgtatgctgtacaatttcatcttgtaaagagggtattaataatagattgggatgtg
catcatggaaatgggacgcagtctattttcgaggaagatccaagaattctttacgtctcc
gttcatcgttacgacaacggaagcttctttccaaattccaagatcgctaattatacgaac
gttggcttaaacgcaggcgagggattcaatgtgaacataccgtggaacaagaaaggaatg
ggagatgctgaatatatagcggccttccagcaagttgtgatgcctatcgcttaccaattt
aatccagagttggttctggtttcggccggatttgatgcttgtattggcgatacacttgga
ggttgtcttgtaagcccagaactctacggtcatttaactcattggctttcgtccttggcc
aatggtcgtataatcttgagtctcgaaggaggttacaacatcaactccatctcgcacgcg
atgaccatgtgcaccaagaccttgctgggtgatccgttgccgatgctagatcccagtctt
attccttgcaccagcgcgatcaattccatcaataacgtattgaggactcataaaaagttc
tggtccaacctgcagtatggaatgtccttaccgaaagagaaggtacttcctaaactcaag
acggttcctaacaaacacgaggagcaaggaagaaacgcggataaaccaaaacaaatggaa
ccaaagattgctttggagggaattgaaagtgaaaaactcgagctgaacttggctattgac
aagaactgcttgaatctagtgacggacgaggaaatctcgaagctaacgtgcgaagtggaa
aatattaagataaaaaatttcgaattgcacacgatgaaaagtgaagcgatcgaggcgaaa
aggaatcctgaattgaagcagaacgaggcgaaaaatctggatgtttcacaaagtatacat
aaatgcgtgaacgagacgaaccagtcgagagacaaccagcaaggagattctaacatacgc
gaggaccgtgatgatcaagctgcgtcgtcttcacagcgtgggacacaagccactactctc
tcagagtatctctctgaaaatcttcgggctctgaatgcgggcgaaatgttcgctgtctac
cccctgcaagactgtccgcatttagtcacgctcaacgatgttcccccgggagggatcaac
gtaaatgtaccatgtgttgaatgtgacaggaccgaggaaaactggatctgcctgcaatgt
tacaccgtgcactgcgcccgcaatattaatcggcacgcgatggagcacgcggaggaacac
gagcatcctcttacgctcagtttcagcgatatttcagtctggtgttacggttgcgaagct
tatattgataatcctcgattatatgcagcgagaaacgcggtttaccaaagcaagtttaat
gaagagcttccctggacttatagcgagagccgcactgaataa
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integrated database retrieval system
