Solenopsis invicta (red fire ant): 105202258
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Entry
105202258 CDS
T03916
Name
(RefSeq) integrin beta-PS isoform X1
KO
K05719
integrin beta 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04145
Phagosome
soc04512
ECM-receptor interaction
soc04820
Cytoskeleton in muscle cells
soc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
105202258
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105202258
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105202258
09142 Cell motility
04820 Cytoskeleton in muscle cells
105202258
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105202258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105202258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soc04147
]
105202258
04515 Cell adhesion molecules [BR:
soc04515
]
105202258
04090 CD molecules [BR:
soc04090
]
105202258
Membrane trafficking [BR:
soc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105202258
Exosome [BR:
soc04147
]
Exosomal proteins
Proteins found in most exosomes
105202258
Cell adhesion molecules [BR:
soc04515
]
Integrins
Integrin beta subunits
105202258
CD molecules [BR:
soc04090
]
Proteins
105202258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
105202258
NCBI-ProteinID:
XP_011168976
LinkDB
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Position
13:complement(2428395..2437587)
Genome browser
AA seq
848 aa
AA seq
DB search
MGAKSMFGSSGWILVLGVLAASLSASFAQANYPPPPERLTGMNPCISKQTCHECIQTPHC
AWCAAPKFPEKRCFLPNINTKILATCPPEYTWNPDNVFSMLRHRNLTKGGYATGGGTGGG
FSSIEGSYSNSSSSSSSSSHSHKESWGAGGGRRHEAVQIWPQEVNLKLRINEAYRMSFAY
SQAEDYPVDLYYLMDLSKSMEDDKKKLSDLGQLLVESMSKITSNFRLGFGSFVDKVVMPY
VNTVPKSLIEPCDGCAAPYGYRNIMKLSDDTGNFAGLVRNASVSGNLDAPEGGFDAIMQA
IVCRKQIGWREKARRLLVFSTDAGFHYAGDGKLGGIIKPNDGLCHLDAGGTYTHSSLLDY
PSISQINLKVKQNAINIIWAVTEEQINVYKRLMKHVEGSFAGKLSDDSSNVVELIREQYD
AISSSVEMKDTASSAIKVKYFSSCLGGPAVETSKCDGLKVGTKVEFIAEIEVTSCPANRS
EWKQKFDIYPVGINETLTVNLELLCDCECEHEGYMYEERSPECNNNGTLKCGVCECYDGF
FGKHCECDSHKPIGLDKHFQSCRPDNTTLVDCSGRGTCTCGQCECEELQNPGEEITGPFC
ECDNFSCDRDQGKLCSDHGTCECGHCVCNSGWTGDACSCRTSDACIAPGTTNGVLCSGHG
DCICGVCICHEEGNIRYSGKHCNKCPTCPSRCEELKPCVQCQMYGTGNYSEPEECARNCK
EFVPEGVETVIVDVDNDEEPCFGTDEDDCKYNFVYYYNETNCLQVRAQNERECPPQVYML
GIVLGVIAAVVLIGLALLLLWKLLTTIHDRREFAKFEKERMMAKWDTGENPIYKQATSTF
KNPTYAGK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaaaatcaatgtttggcagctcaggatggatccttgtgttaggggtgctagcg
gcgagcctgtcggcctcgttcgcgcaggcaaattatccccctcccccagaaagactgacc
ggcatgaatccttgcatcagcaaacagacgtgccacgaatgcattcagacgccgcattgc
gcttggtgtgcagcaccaaaattcccagagaagaggtgcttccttccgaatatcaatacc
aaaatattagcgacgtgtcctcccgaatacacatggaatccagacaatgtcttcagcatg
ctgcgacaccggaacttaacaaagggtggctatgccactggtggtggcacaggaggggga
tttagtagcatcgagggttcatactccaactcttcgtcttccagctcgtcttcctcgcat
tcgcataaggagagttggggtgctggcggaggtagaaggcacgaggctgtgcaaatatgg
ccacaagaggtcaatctgaagcttagaataaatgaagcttacagaatgtcctttgcttat
tctcaagcagaggattaccctgtcgatctctactatcttatggatctgagcaagtctatg
gaggatgataaaaagaaactgtccgacttaggccagttgttggtcgagagtatgagcaag
attacgagcaattttcgtctgggctttggtagcttcgttgacaaagtcgtaatgccgtac
gtcaatacagtgccgaaatctcttattgaaccatgtgatggttgtgcagcaccttatgga
tacaggaacatcatgaaactttctgacgacacgggcaactttgcgggattagtacgcaac
gcgtcggtgtctggtaacctagacgctccagagggtggttttgatgcaatcatgcaggct
atagtttgccggaagcagattggctggcgcgaaaaggcacgtcgattgttagtattctcg
actgacgccgggtttcattacgcgggcgacggcaagctgggcggtattatcaaaccaaat
gacggcctttgccacttggatgccggcggcacgtacacccactcgtctctgctagattac
ccgagcatctcgcagatcaatctaaaagtgaagcaaaacgcgataaacatcatatgggca
gtaaccgaggaacagatcaacgtctacaagagactgatgaagcatgtggaaggttccttc
gctggcaagctttcggacgattccagcaacgttgtggaactgattcgcgagcagtacgac
gctatctcgagctcagtagagatgaaagacacagctagcagtgcgatcaaggtgaagtac
ttctcaagctgcctgggcgggccggcggtcgagacatcgaagtgcgacggattaaaagtc
ggtacaaaggtggaattcattgcggagattgaggtcaccagctgtccggcaaacagatcg
gaatggaaacagaagtttgacatttatccggtcggtatcaacgagactctcacagtgaat
ttagagttattgtgtgattgcgagtgcgagcatgaaggctacatgtacgaggagcgctcg
cccgaatgcaacaacaatggtacactcaagtgtggcgtctgcgagtgctacgacggattt
ttcggcaaacactgcgagtgcgactcgcacaagccaatcggactagacaagcatttccag
tcgtgccgtcccgataataccacccttgtggattgctccggccgcggcacgtgtacctgc
ggccaatgcgagtgcgaagaattgcagaatccgggcgaggaaataacgggacctttttgc
gagtgcgacaatttctcttgtgatcgtgatcagggtaagctctgctctgatcatggcact
tgcgagtgcggccattgcgtttgtaattctggctggaccggagacgcttgcagctgtagg
acttctgatgcatgcatcgcaccaggaactacgaacggagtgctctgctcaggccatggc
gactgcatttgcggagtgtgcatctgtcacgaggagggtaacattcgatattccggcaag
cactgcaacaagtgtccaacctgcccgagccgctgcgaggagctgaaaccctgcgtacag
tgccagatgtatggcactggaaattacagcgagccggaagagtgcgcgaggaactgcaag
gaatttgtgcccgagggcgtggagacggtaatcgttgacgtggacaacgacgaggagcca
tgcttcggcaccgacgaggatgactgcaagtacaacttcgtctactactacaacgagacc
aattgcctgcaggtgcgcgctcaaaatgagcgcgaatgcccaccgcaggtctacatgctc
ggcatcgtgctcggcgtgatcgcggcggtggttctgatcggtctcgcgttacttctgcta
tggaagctgctgacgactatacacgatagacgagaattcgccaaattcgaaaaggagaga
atgatggcgaagtgggacacgggagagaatccaatttataagcaggctacttccaccttt
aagaatccgacctacgctggaaaataa
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