Solenopsis invicta (red fire ant): 105202313
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Entry
105202313 CDS
T03916
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105202313
Membrane trafficking [BR:
soc04131
]
Protein recycling
Others
EARP complex
105202313
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DcpS_C
DUF6614
Motif
Other DBs
NCBI-GeneID:
105202313
NCBI-ProteinID:
XP_011169062
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All DBs
Position
7:1610529..1616817
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AA seq
941 aa
AA seq
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MQSDIMEDLKIKFFGLINKQNATKVPLMGVNPDLLNPPDLQKCEDLYSEADQSTESEPIP
DQDVLDSIEDVYFSTDDNFDSSLYELEKLPAILHSKEIEKCFKKLKQQHQVVSKKVLQLI
LQKQSACKAEFDKILLLQDQLQDVLEKCKMGRSDLQLAEKQFTKASLGILANYQRRQVIQ
ELLTSLNTIKTLQCTGDRLQELLNEGNYPGAISLLLECQSAAQTYRHFRCIAELNTNLQN
ILDQAERTLDNTLSKMCTEFDVAVYSSIQEAYTLLGKTQSAMDQLHMHFTAAIHNTAFAV
IHRYAGGDVKRQYKQLCQAVPREERITCLTELCKSLWTILNSYHLIVNWHNMQEDKAECK
SDVKDVEITISKQYVKHKLENGMVRVWHDVELKISIYLMNTDLTNTKFEQFVQVLGIVNR
LMEIGEDLCGFKSENLQESIKKQSLSYFSHYHASRLDELKMFLEHDGWELCPVKSNFMVT
QLLEFRSLKPSLNNCKAWNSLDSSTLSDSDNSTGVDLQKYLESGLSPFTIGLDDTMDEDI
LINDDIDQPAYFSDESDEDIPDELKHEYVDELDYTKVNKKKCKLKQSGPMVTNMTLSVLR
VCGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLAR
IRETLIISENDTMEENGNANYDKVRQPQLSSIVNLSQPEKLYGLTERIVAVESLIFLGQQ
YEGLRPYLEHLIASSPQRGFLHQFYMQTIASAADLRKPVYMAVTSQAFNVANILNLMSKV
NWEVTDVMSQHSNYIDALIQEVCTLNERLSTIIGTYIPLNADICNAIWENVAHLITHTLV
EGFSNAKKCSNGGRALMQLDFTQLKSKFEKVTSLRPMPHREYVELYIKAYYLPENSFEEW
IKEHKEYSVKHLVGLISATCQNNKKTRQRLIAVVEEQRPGR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgacatcatggaggatttgaagattaaatttttcggcctcatcaacaagcag
aatgcaactaaagtgccacttatgggcgtgaatcccgatttgcttaatccacctgacttg
caaaaatgtgaagatctctattctgaagctgatcaatcgacagagagtgagcctatacct
gaccaagatgtgctagactctatcgaggacgtttacttcagtactgatgataatttcgat
tcgtcgctctacgaactggagaaattgccagcaatactgcattctaaggagattgagaaa
tgttttaagaaacttaagcagcagcatcaagtagtctcgaagaaagtgctacagcttatc
ttgcagaagcagagtgcctgtaaagcggaatttgataagattcttctactgcaagatcaa
ctgcaggatgttttagaaaaatgtaaaatgggaaggtcagatctgcaattagctgagaaa
caatttaccaaagcgagtttaggcatattagctaactatcagagacgacaagtaatccag
gaactgttaactagtttaaatactataaagaccctgcaatgtacgggggatcgtctgcaa
gagcttttaaacgaaggaaattatcctggagctatatcgcttcttttggagtgtcagagt
gctgctcagacttatagacatttccgttgtatcgccgagctgaatacaaacctgcaaaat
atattagatcaagcagaaaggacattagacaatacgctctctaaaatgtgcactgaattc
gacgtcgcggtgtactcttccattcaggaagcatacacattgttagggaagactcaatct
gccatggatcaattgcatatgcatttcaccgctgccattcacaacacggcgttcgccgtt
atccatcgctatgccggcggtgacgtgaaaagacaatacaaacaattgtgtcaggctgtg
cctcgtgaagagcgtataacttgtctcacagagctgtgcaaatcactatggacaatactg
aattcatatcatttaattgtaaattggcataatatgcaagaggataaagccgagtgtaaa
tccgatgttaaggatgtagagataactataagtaagcaatacgtcaaacataaattagag
aatggtatggtcagagtgtggcatgatgtggaactgaagatatctatataccttatgaac
accgatttgacaaatactaagtttgaacaatttgttcaggtattgggtatagttaacagg
ttaatggaaattggggaagatctctgtggttttaaatcggagaacttacaggagtccata
aaaaagcaatctctatcttatttttctcattatcatgcatctcgtttggacgaattgaaa
atgtttttggaacacgacggctgggaattgtgtcctgtaaagtccaattttatggttacc
caattattggaattccgaagtctgaagccttcgctcaataactgtaaagcatggaatagc
ctagatagctcgaccttaagtgatagcgataattctacgggggtcgatctgcagaaatat
ttggagagcggtttgtcaccgttcacaattggattggatgatacaatggacgaagatatt
ttaataaacgatgatattgatcaacctgcgtatttttcggacgagtccgacgaggatatt
cccgatgagttgaagcacgagtatgtagatgagttggactatacaaaagttaataaaaaa
aagtgcaaactcaaacagtctggacccatggtcacgaacatgacattaagtgtactgaga
gtgtgcggcaagtatctacagatgtcgaagcttttgcgatcaattgcggttaccgtcata
cagagcatgatacaatttttcgagctatgcttctacacagtacacttattctttacatca
gatctccaaatcaatagcgactcgttatacagtccaaaattaaaattatccttagcacga
attagagaaacactgattatctctgagaatgatacaatggaagaaaatggcaatgcgaat
tacgataaagtaagacaaccacagctttcatccattgtgaatttgtcacagccagagaaa
ctttacggattaacggaacgtattgtagctgtcgagtctctgatatttttaggacaacaa
tacgaaggcttaaggccttatttagaacatctcattgccagcagtcctcagagaggattt
ttacatcagttttatatgcaaacgatagcgtccgccgctgacttaagaaagccagtctac
atggcagtgacgtcgcaagcatttaacgttgcaaatattttgaatttaatgagcaaagtc
aattgggaagtgacggacgtcatgtctcaacacagtaactacatcgatgcgttaattcaa
gaagtgtgcaccttaaacgaaagacttagtactattattggaacgtacattcctttaaat
gcggatatatgtaacgcaatatgggaaaatgtggctcacttaatcacacacactttagtg
gaagggttttccaatgctaaaaagtgttcgaatggcggtagagctttaatgcagcttgat
ttcacgcagctaaaatcaaagttcgagaaagtgacatcgttgagacctatgccacatagg
gagtacgtcgaattgtacatcaaagcgtactatcttcctgaaaatagctttgaagaatgg
attaaagagcacaaggaatattctgttaaacatttagtcggtctgatttcggcgacatgt
cagaacaataagaaaacgcggcaacgattgatagcagttgtggaggagcagcggcccggt
agatag
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