Solenopsis invicta (red fire ant): 105202315
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Entry
105202315 CDS
T03916
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202315
03036 Chromosome and associated proteins [BR:
soc03036
]
105202315
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105202315
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105202315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
HHH_9
SH2
HHH_3
Tex_YqgF
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105202315
NCBI-ProteinID:
XP_025986196
LinkDB
All DBs
Position
7:complement(1393793..1402407)
Genome browser
AA seq
1746 aa
AA seq
DB search
MVQYLDSEADVSEGEEELDQNKKLKLKTMGESDDEEEDDEDQLREELKDLIDDNPIEESE
GDDSDGSNHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLERKRFKRLRRIQDEESEEE
QEKKADEERDAIANELFEGSGDEDERRSERSHRPEAVTFEEGSDEGEYTDADDFIVDDDG
RPIAKKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEDEYLNEDADTERP
RRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLRSVVVTPVPEGS
DELDLEAEWIYKQAFCKPTISIQDVHLNAEAKERARKEPQTIGKIKKALDFMRNQHFEVP
FISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEKMRSYQLDEIMKNSDA
PLSDNVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHEIPAMQEAVRQKEMQARREER
IQRRKQQIAEAEENGEEACHRSFFPPAEEEEAMEEEKMLKKAVRNGPYSICRKAGLDGLA
KKFGLTPEFFAENLYDSYQRHKVDQESTEPATIASEYCSSHFKTIEKVLKGAQLMVATQL
AREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYTMKYLKDKPVRDLVGVQFLNL
MIAEEDKLITITLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRVGSVEIALNRM
VIPHLKKELRTNLIAEAKECVMRACCRKMYNWLKVAPYNCEFPEEENEEWDTSKGLRVMG
LAYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSFREDEKTMKEADLLALKNFIATK
KPHVVVVAGESREAMMIAADIKECITHLSEEEQFPNIQVEICDNELAKIYSNSNKGISEF
RDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKEELLENLYLEFV
NRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKSQALIKMLKQTNQRLENRMQLVTACHI
GPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANS
AGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNNRYKDLRVPYESPS
AKKLFDVLTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRNEETGLWQCPFCLK
NDFPELSKVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCERVGMGKII
HCRIIKIEVDRFSVECTSKSSDLADKNYEWRPQRDPFYDTETEQKDIKVEEDAKKAKQRQ
IYVKRVIIHPAFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTDDILQHINV
REEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYVSELVDFKYYKSAVDGIKDRA
EDLLKEQKKENPNGIPYIISASKTYPGKFLFSYLPCTRCRHEYITVTSEGFRFRAHMFGR
VSHLLRWFKEHFRDAVPGQSIPSTPRGAMTSRTPYTTTPGTVSGMNPETIQRVAQNLSHH
MLHSLSQVANQTPHHTPGASATGYGGVHTYPNTSYTPFGQTPFMTPYQTPHHGHPTPRYG
QQTPSHHQGPFVHPPPPSMTPGHHRSAQSHRPTPLPSGDPTDWKKAAEAWARLKSGPRDS
GSTPRYESRKTPRNYDESVGRTTPSGRSRPSTRTPSYKSPRGTPHTNSSPRSMSLRGDGT
PLYDES
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggtacagtatctcgattccgaggcggacgtaagcgagggtgaggaggaattggatcag
aacaagaagttgaagctgaagacgatgggggaaagtgacgacgaggaggaagatgatgag
gatcagttgcgcgaagaactgaaagatttgatagacgacaatcctatagaggaaagtgag
ggtgatgacagcgatggttctaatcatcataagaaacgtaagaaaagtgacgacgaggat
tttgacgatcgcttagaagacgaagattatgatctgattgaagaaaatttaggtgttaag
cttgagagaaaacgtttcaagcgtcttcgaaggattcaggatgaggaatcagaggaggaa
caagaaaagaaagcggacgaagaaagggacgccattgccaacgaattgtttgaaggttct
ggagatgaggatgaaagacgaagtgaacgaagtcatagaccagaggcggtaaccttcgaa
gaaggcagtgacgaaggagaatatactgacgcggacgattttattgttgacgatgatggt
agacctatcgcaaagaaaagaaaaaagaagaagccaatattttctgatgcggcgttacaa
gaagcacaggacattttcggtgtggattttgattatgacgaattcggcaaatatggtgag
gaagattatgaggaagaagaagatgagtatttgaatgaagacgctgatactgaacggccg
cggcgaccgaagaaacagctaaagaagaagaccacgaggaagagtatttttgaaatttat
gagcccagcgaattgaaacgcggtcactttactgatatggataacgagatacgtaatacg
gatataccagaaagaatgcaacttcgatccgtagtggtcacaccagttccggaaggttct
gatgaactggatctcgaagcagaatggatctacaagcaggcattttgcaagcctacaatc
tctattcaggatgttcatttgaatgccgaggctaaagaacgagctcgaaaagaaccacag
actattggcaagattaaaaaagccttggacttcatgcgtaatcaacactttgaagtccct
tttatatccttttatagaaaggagtacgtactgcccgaactgaacatcaatgacctgtgg
aaggtttataagtttgacgcgaaatggtgccagttgcgtcagcgaaaggagaatttgctc
aagctatttgagaagatgcgcagctatcaattagatgaaattatgaagaattcagatgcg
ccattgtcagataacgtgcgagtgatcaaagacgacgacattgagcgattgaagaatgtc
cagacaagtgaagagcttaacgacgtctataatcatttcatgctgtattacagccacgag
atcccagcgatgcaggaagccgtgcgacagaaggagatgcaggcacgacgcgaagagaga
attcagcgacgtaaacagcagattgctgaggcggaagaaaacggagaagaagcatgtcat
cgatctttttttcctccggcggaggaagaagaggcaatggaagaagaaaagatgctaaag
aaagccgttagaaacggcccgtattcgatctgtcggaaggccggtctggatggtttggca
aaaaaatttggtttaacgcccgaattttttgctgaaaatctttatgacagctatcagcgt
cacaaggtcgatcaagagtcgaccgaaccggccacaattgcgagtgaatactgtagctcg
cattttaaaacaatagaaaaagttttaaaaggtgctcagctgatggtagcaactcagttg
gcacgcgagccacttgtacgtaaatgcgtgcgcgagatgtacatggaacgcgctaaaata
tccgtgaagccaacaaagaaaggcatcaaagagattgacgagaatcatccgatctacaca
atgaaatatttgaaggataagccagtacgcgatctcgtgggcgttcagttcttaaatttg
atgatcgctgaagaggacaaactcatcacgatcacacttagtgactccatcgagggtaat
accagcagcaattacgtcgatgaaatgaagcagctctattgtcgagacgagttcagcaaa
ctcgtgcaagactggaacgctttgcgcgtaggtagcgtcgaaattgcgcttaatcgcatg
gtgataccacatcttaagaaggaactgcgcactaatctgattgccgaggcaaaggagtgt
gtgatgcgcgcatgttgccgcaagatgtacaactggctcaaagtcgcgccatacaattgt
gaatttcccgaagaagagaatgaagaatgggataccagtaaaggcctgcgcgtcatgggt
ttggcctatgtgccagactattcgcaagcagctttcacttgtctaatcgcggccgacggc
gaatgcaccgattatctgcgcctgccacatctgatgaagcgcaagaacagttttcgcgaa
gacgagaaaacgatgaaggaagccgatctactggcattgaaaaacttcatagctacaaag
aagccacatgtggtcgtggtggccggcgaatcccgggaagcgatgatgatcgccgccgat
atcaaggagtgcatcactcatttgtcagaggaggagcaatttcctaatatccaggtggag
atatgcgacaacgaactcgcaaagatttattccaatagtaacaaaggtatctcggagttc
cgagattacccggagttgttacgccaggctatctcgctggcaagaaggatgcaggatccg
ctggtggagttctcacagttatgcacggccgacgaagagattctctgcctcaagtatcat
aatttgcaggatcaattgcctaaggaagaactactagaaaatctgtatttggagttcgtc
aatcgcgttaatgaggttggcgtagacgtgaataaggcagtccaacaagcatactgtggc
aaccttgttcaatttgtttgcggtcttggcccacgaaagagtcaagcattgatcaagatg
ctgaaacagactaatcagcggttggagaacaggatgcaattagttaccgcatgtcatata
gggccgaaggtattcattaattgcgctggctttatcaaaatcgacaccaacagtttaggc
gatagtacagaggcatatgtagaagtgcttgatggttcccgcgtacatcccgaaacttac
gaatgggccaggaagatggcagtcgacgctctagagtatgacgatgaggacgccaattcc
gccggcgctttagaagaaatactcgagtcgccagaacgcctcaaggatttggatctcgac
gctttcgcggaagaacttgaacggcagggtttcggcaacaaatgcgttactctctacgac
attagggccgagttgaataaccggtacaaggatcttcgcgtgccatatgaatcgccgagc
gcaaaaaaactattcgatgttctgacgaaggaaacacctgagaccttctacgtcggcaag
ttagtattggctactgtgatcggcatcagtcatcgaaagccacagggtgatcagcttgat
caagcgaatccggtgcgaaatgaagagactggtctgtggcagtgtccgttctgcctgaag
aacgattttcctgaattgtcgaaggtgtggaatcacttcgacgctggcgcttgtccaggc
aaggccacaggcgtgagattgcgattggacaatggtatctccggttatattcacataaaa
aacttgtcggatcggcacgtggcaaatccttgcgagagagtcggcatgggaaagattatt
cattgtcgaattattaaaattgaggtagaccgattcagtgtcgaatgtaccagcaagagc
agcgatcttgctgacaagaattacgaatggaggccgcaacgagatccattttatgatacc
gaaacagaacaaaaggatataaaagttgaagaagacgccaaaaaggcaaaacagcgtcaa
atttacgtgaaacgcgtaataatacatcctgcctttcataatatcagtttcgccgagact
gtaaaactaatgcagacaatgaagcagggcgaagcaatagtaagacctagcagcaaaggc
gccgaccacttgacagtcacgtggaaagtcacggatgatattctacagcatattaatgtt
cgcgaggagggtaaagagaacgccttctcgttgggccaaagtttatggatcgggaacgaa
gagttcgaggatcttgacgagattatcgctcgtcatgtcaatccgatggccgcgtatgtt
tcggaattggtagattttaaatattataaatctgctgtggatgggataaaagatagagcg
gaagatcttttaaaggaacaaaagaaagaaaatcccaatggaattccttatataatatca
gcatcaaagacttatcctggaaaatttttattttcgtatctgccgtgtacgcgttgccgc
cacgagtatatcacagtaacatctgagggctttagatttcgagctcatatgttcggtagg
gtaagccacttattacgctggttcaaggaacactttagggatgccgttcctggacaatcc
attcctagtacaccgcgtggcgcaatgacttctcggacaccttatactaccacgccggga
acagtcagtggaatgaatccagaaacaatacaacgagttgcacagaatctttcgcatcac
atgctgcactcactgtcgcaagtggcgaatcaaacgccgcatcacacacctggagctagc
gctaccggctacggtggagtgcatacgtatcccaatacttcgtatacgccgtttggtcaa
actccatttatgaccccatatcaaacccctcatcacggccacccaactcctagatatggc
caacaaactcctagccatcatcaaggacccttcgtgcatccaccgccgccttcaatgacg
cccggtcatcacagatctgctcaatcgcacagacctacaccacttccttctggcgatcca
acagattggaagaaagccgccgaagcgtgggcacgtttaaaaagtggtcctcgagactct
ggatcgacacctagatacgagtccaggaaaactccacggaactatgatgagtctgttggc
agaacgacaccttctggaagaagcagaccttctacgcgtactccgtcatacaaatctccg
cggggcacgccacacacgaattctagtccacggagcatgtctcttaggggagatggtact
cccttatacgatgagagttag
DBGET
integrated database retrieval system
