Solenopsis invicta (red fire ant): 105202391
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Entry
105202391 CDS
T03916
Name
(RefSeq) vacuolar protein sorting-associated protein 13 isoform X4
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105202391
Membrane trafficking [BR:
soc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105202391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
SlyX
Motif
Other DBs
NCBI-GeneID:
105202391
NCBI-ProteinID:
XP_025994276
LinkDB
All DBs
Position
13:complement(3127240..3149008)
Genome browser
AA seq
3237 aa
AA seq
DB search
MVFESIVAELLNKVIGEYIENLDYTQLKVSLWGGDLVLNDLLIKESALDVLDLPVRLEYG
RLGKLILKIPFKDMWNGQIDAIVEELFILVVPTSQVSYNEEKETKAQLETKRAELERVEK
RKQLAEIKSQEKLDDSMVEKLVARMIKNIHVEIKRIHVRYEDHVTFKEHPFSVGFTLNTF
VLESCTDSWETTGNLKDMYAIPQIFKLCSLDGLAAYLNTNVEQYSTSSQSTYSTLFCSGI
ATMDYTPPNYQYLLGPINVKSKLRLNPKPESDGSNYTIPKMWLDLEMQKLRIGLTKRQYQ
TLVRLGEGLDQARKAAPYRKYRPNLTSYRGHYKEWWHFAYTCVLEETVRRCRRNWDWNHM
KRHRDTCRIYAEAYQTKLTTKKLAKEIEEQLTHCERNLDIFNLVIIRQQIEMEVERLAER
EKSLKAKRGWFGFLWTSSQVEETKDLNSAAAIMRKFEEAMTPQEKEKLYRAIDYQENSAP
AHYPETYEMIDTRFFLHGLQISLLDTDKKHSCVLDLQLHGVRAGFKSRPSANAILVTASI
SDMKLLGATQSGRVPSLFNPGHGSSDSALLSISYEKNPLDKLCGDRVIVKSRSVDMVYDA
QTIIELVNMFKVQNSSTLSQLQTAAAVQLEGLKEMSALGLEYAIEKHSVLDIQVDMQASQ
LIIPHGGLYENSKALIVVNLGSLKMHSLGMGKSEMAGASVKQLVSMGKSEEEVLLYLREH
SYDKFVMKIVNFQVLVSLPNEEWRSALASTESSLTLLYPTTLEIQFHKCLVTDDPLLPKL
RLLGRLPSVAVNITDIRLLQALSIVQSISLPEEEKPAELQRVSLSKSVSQLSLKEIGTTI
SSIVDKRKQQETAAPMKQTTDLEMKFEMKEFTLSISRQSGDDVSEFIRLQVLQLEAEMLQ
RTYDQEIHLRLGGVQMRQLYEDQEIFMVNTPMSTGRDEYLITVQYVNVNKRSPEFNTRHG
SVVKLLRLEFTTLDTLLHQEALIELLRFSTYIQDQMSSLEGVQKKEVETRLRPTRLTSIQ
EETSGFLKEQLQKQRRPTGRRRRQTVECIDLKVNAKVGSINLKISSAARDITALYIEGMS
ASFLSKSSYSQVNADLASISIKDLNPASMYKDIVAVEGTESLQIQAVMYNIEQWEMDKNN
MSVNVTMGCHRIVFLNAFVTSVMNFLNNFQAAQKAIKEASAAAAEAAKTNIKDVQESASR
IELSVRIKAPVIYVPMNSKKDHSLMLDMGNLMVRNVFKKLDVTNEETGECPIVDEMKIEL
QNLKLSRIRLNMEKFTSENEVLLLEPVTFTLLMKRNLSTAWFTTIPDIDMSGRLNKINLL
LSKEDYATILKVLEQNLGETFEDSKPVQAVPSAMKSEISEEIQPAYKYEIDASREPPSDT
QERPAHTSVKFEFIMDSLVINLFTGGSKSLQSQTSPLHLPEHGLARFSLTHFAVKGRVFA
DGLLATSILLMNCTLDDMRQSREGSLVRIMERTSSVSGANEDHLDKKHAKYNARSMLDVT
VRQSPNDTFADVRVFSFSIIVSLDYLMKVKDFFDVDTANKTAIASSTKSELIPKKKPTQQ
QTASTPKMLTVNLHVEKPDIILLENMDDINSNCIVLNTELLLKVRIMGEHQVITGSIKDL
SLLTGIYNPAKRADWIYQVLRPCSISVAGSTPEGKGLHLEVRCTDIHMSVSPGVIEILNK
VIHMVTKKEEEDMEVVKSEPNYEGLWIVTPFEDNNYWFLKTEVAMEALEEFTYPDDDVVA
TYKPELAIVSAPTILFTLEAGVGNKTLPMLLLHVGFESSINDWSTKSMSVDCSMSVIMAY
YNSRLALWEPLIEPIESSDNGKRISTPWELKTKIQFNDIMLDSKGASAISPISESEPEEL
HQSTKMSIDITSSDNLEITVTKTCLDVLKQLGQSFSSAMEASGKGPTKKVAPYMLKNEAG
LPIILNLEHSLFKIFDEEERNDKIMEVILETGASLELAPKTSKLVDTRLLEQLKVETVKD
REDTKFSIRFKDGIQSKLTIPVLRADRRFFSMKHRKDGSEEWGIVSDVIVEEGSTIVTLR
SVLQVHNHFAQPISVYYMTKRGNEVECVGTVAPDEKLNLPLDAVYTPTNIYWLFFSVDGY
MVSVEPFVWKDLQKTVSMTKLLKCESRSKQDTTEPFYIQAVGEIEQVYFENTTRHTMAST
VYNVHLYPSVYLKNFLPIDIIICLPGTGQESLLEASASLQLPTIDPAKSNIIIKLPNYLE
KDWSCKGEIVANPPEFAVWSFESFDSAQKVILDLGMHTSHKHGSIIMALYCPFWMLNKTG
LMLSYRTTDDYLNVLYHPEHFKGPILFSFRSKAFFGKKKAMIRVEDGEWSDKFSIDVAGS
EGVVACKYNGMIYQIGVHNQLTYNSLTKQITFTPYYILINNADFLIECQEGDRPADPMIK
VLPGECAALWPRTEHESKTLKAKVSGQPEKTAAFIYTDSHTTLLKLDNKYGGINVDVQIS
EGGVYISMSAYSPGNAPALIINHTPHCINLWEKGSINIRSVQSNNRMFYTWENPAGPRTL
VWEDNNGKEIEDNLRKDNLGTFHLPDVDEKLFYVSFLDGTQRVLLFTMNLKIAEDCQLAG
DLEVIDQEIILNIHGIGFSLVNNITKSELLYMCVASSGIIWETRKSLGSRWRALNAKEVN
AIEEGYQRYIRELQINKEADYRIMLEPKLMVDYMNMEMLRPHRRYMRRTFQTGLWLQYRT
SAHQVQLHAKINKLQIDNQLSECVFPVILAPVPPPKSVTQSTVMKPFAELSMVKRLLEHS
TVQQFRYFKVLIQEFHIKVDIVFINAIVGLFEADEVNETEESTLFRTDMKLVNEPLMYHV
SLITTAEQKNFFDLLHFSPLKIHISFSMTGSGGGPSALPQVLNVLLQGIGVTLTDINDIV
FKLAYFERNYVFMTHKQLVSEASTHYAGQAIKQAYVLVLGLDVIGNPYGLVVGTMKGIED
LFYEPFQGAIQGPGEFAEGLFLGVRSMLGHTVGGMAGAVSKITGAMGKGIAALTFDKDYQ
RKRQEQLNKQPANLQEGLARSGKGLVMGVVDGVTGVVMKPISGAKEEGVEGFFKGFGKGV
VGLVTRPTAGIVDFASGSFGAVRRATELSEEAKRVRPPRFLQPDSLVRPYIKDEAEGNKI
LMELEKGKYAHTDVYIYHVFINKDVLLLTDKRLSYLERNDLFGGWRVDWTHTWNEFSEPA
RVVEKGVQIFIKDASKKKKLGGLFGSADQSKILLISDHNIKQLLYKKIQEQINQSGI
NT seq
9714 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgattgtcgcggagctcctgaacaaggtgattggcgaatacatagag
aacttggactatacgcagcttaaagtcagcctttggggaggcgatcttgtattaaatgac
ttattgataaaagagtctgcgttagacgtgttggatcttccagtgagattggaatatggt
cgcttagggaaattgatattgaagatcccgttcaaagatatgtggaatggccagatagat
gctatagttgaggagctatttatattggtagtgcctacgagtcaagtttcatacaatgaa
gagaaagagacgaaagcgcaattggaaacgaaacgagcggaactcgagagggtggaaaag
agaaaacaattagcggaaataaaatcgcaagagaaactggatgattcgatggttgagaaa
ctcgttgctcgcatgatcaagaacattcacgtggaaatcaagagaattcacgtacggtac
gaggatcatgtcaccttcaaagagcacccgttttccgttggttttaccctgaacaccttt
gttctcgagagttgcacagactcctgggaaaccactggcaatttgaaggacatgtacgcc
attccgcagatcttcaaactatgcagtctggacgggctggccgcttacctcaatacgaat
gtagaacagtacagcacgagctcgcagtccacgtattccactctcttttgtagcggcatt
gcgaccatggattacactccaccgaattatcaatatctgttaggtccgatcaacgtcaag
tccaagctcagactcaatcccaagcctgagtccgacggcagcaactacaccattcccaag
atgtggctggacctagagatgcagaaattacggatcggtttaacgaaacgtcaataccag
actcttgtccggttaggagagggcttggatcaagcgcggaaagccgcgccctacagaaaa
taccgaccgaacttgacatcgtatcgcggccactataaggaatggtggcattttgcgtat
acctgcgtcctcgaggagaccgtgcgacggtgtcgtcgtaactgggactggaatcacatg
aagcggcaccgcgacacttgtcgcatttatgccgaagcctaccagacgaagctgacgacg
aagaagctagcgaaggagattgaagagcaactgacgcattgcgagaggaacttggacatt
ttcaatctggtgattattcgacagcagattgagatggaggtggaaagactggcggaacga
gaaaagagtctaaaggcgaagcgagggtggttcggtttcctgtggaccagttcgcaggtc
gaggagacgaaagacctcaattcggccgctgccatcatgcgcaagtttgaggaggcgatg
acgccgcaggaaaaggagaaactctatcgggcaatcgattatcaagagaatagtgcgcca
gcacattatccagaaacgtacgaaatgatcgatacgcgtttttttctgcacggcctgcag
atttctctattggacacagacaagaagcactcgtgcgttttggatttgcagctgcatggc
gtacgagcgggctttaagtcacggccatccgcgaacgcgattctcgttaccgcctctatc
agcgacatgaaactactgggcgcaacgcagagcggtcgcgtgccctcgctcttcaatccg
ggacacggtagctccgacagcgctctgctgtcgatctcctacgagaagaatccgctcgac
aagttgtgtggcgaccgcgtaatcgtcaagtcccgatccgtcgatatggtctacgatgcg
caaaccattatcgaattagtcaatatgtttaaggtgcaaaactcttcgacgctgagtcaa
ttgcaaacagctgcggcagtacaattggagggcctaaaggaaatgtctgcactcggactg
gaatatgctattgagaaacattcggtgttggacatacaagtggatatgcaggcatcgcaa
cttattataccgcatggtggcctgtacgaaaattcgaaagcgttgattgtagtgaaccta
ggtagtttaaaaatgcattctttgggaatgggcaagagtgaaatggctggtgctagcgtt
aaacaattggttagcatgggcaagagcgaggaggaagtactgctatatctgagggaacac
agttacgacaaattcgttatgaagatagtcaactttcaggtgttggtttcgctgccaaac
gaagagtggcgatcagctttggcaagtacagagagttccttgacactactctatccaact
acattggaaattcagtttcacaagtgcctggtgacggatgatcctttgttgccgaaacta
cggctcctcggtcggctgccgtcagtcgccgtgaacataacggacattcgactgctgcag
gctctctcgatcgtgcagagtatctctctgcccgaggaggagaaacctgcagaattacag
cgtgtttccctctctaaatccgtctcgcagctatcgctgaaggagattggcactacgata
tccagcatcgtcgataaaaggaaacagcaagaaacagccgcgccaatgaagcaaaccact
gatttggagatgaaattcgagatgaaggagtttacgctgtcgatatccagacaaagtggc
gatgacgtgtcggaatttatcagattacaagtgctgcagttagaagcagagatgctgcaa
cgtacgtatgatcaggagatacacctgcggctgggtggcgtgcagatgcggcagttgtat
gaggatcaagagatcttcatggtcaacacgccgatgtcgaccggcagggatgagtatttg
attactgtgcaatatgtgaatgtgaacaaacgttcgccggagttcaatacgcgccatggt
tctgtcgtgaaattgctacgactggaattcaccacgctggatacactgttacatcaggaa
gcgctcatcgagctgctacgatttagcacgtacattcaagatcaaatgagttcgctcgaa
ggtgttcagaagaaagaagtcgagacgcgtttacgaccgactcgtttgacttcgattcag
gaggagacctccggctttcttaaggagcagttgcagaaacaaagaagaccgaccggacga
cgcagaaggcaaaccgtcgagtgtatcgatctaaaggtgaacgctaaggttggttcgatc
aatctaaagatttccagcgccgctcgggatattaccgcactctacatcgagggtatgagt
gccagttttctcagcaaatcttcgtactcgcaagtgaatgccgatctggcctctatcagc
attaaagatctcaatcctgcctctatgtacaaggatatagtggctgtggagggtaccgag
tctctgcagattcaagcggtgatgtataacattgaacaatgggagatggacaagaacaac
atgtctgtcaatgtgacgatgggttgccatcgtatcgtcttcttgaatgcattcgtcacc
agtgttatgaatttcttgaacaactttcaagcggcgcaaaaagctatcaaagaggcgtcg
gcggcagcagcagaagccgcgaagacaaacatcaaagatgttcaagaaagtgcctcgcgt
atcgagctaagtgtcaggatcaaggcgcctgtcatatacgtgccgatgaactctaaaaaa
gatcatagcttaatgctagacatgggcaatcttatggtacgtaacgtcttcaaaaagctg
gacgtgacaaacgaggaaaccggtgaatgtcccatagtagatgaaatgaaaatcgagctg
cagaacttgaagttatcccgaattcgactcaacatggaaaagtttaccagcgaaaacgag
gtgctgttgctggaaccggtgacgttcacgcttctaatgaagcgtaatctgtctaccgcc
tggttcactactattccggacatcgatatgtctggtagattgaacaaaatcaatctgctg
ttaagtaaagaggattatgctacgattctaaaagtgttggagcagaatctgggtgagact
ttcgaggactcgaaaccagtgcaagctgtgccatccgctatgaagtctgaaatcagcgaa
gagatccaaccagcatacaagtacgagatcgacgcatcgcgagaaccgccatcggacacg
caggaacgacccgctcacacatccgtgaagttcgagtttatcatggacagtctggtgatc
aatctcttcactggtggttccaagtcgctgcagtcgcagacgtcgccgctgcatttaccc
gaacatggactggcacgcttcagtctcactcactttgccgtgaagggccgtgtgttcgcg
gacggtttgttggccacgtcgatcctgttgatgaactgcacgctggatgacatgcggcaa
agccgtgagggctcattagtgcgaattatggagaggaccagcagcgtgtcaggagcgaat
gaggatcatctcgacaaaaagcacgccaaatacaacgccaggagtatgctggacgtgacg
gtgcgccagagtccgaatgacacgttcgccgacgtgcgggtattctctttcagcatcatc
gtgtctctcgactatctcatgaaggtcaaggacttttttgatgtggataccgcgaataag
acggctattgcttcttccacgaaaagcgaattgattccaaagaagaagccgacacaacag
cagactgcttcgacgcccaagatgttgactgtgaatctgcatgtggaaaagccagatatt
atcttgcttgagaacatggatgacatcaactcgaactgcattgtattgaatactgaattg
ttgctgaaggtgcgcatcatgggagaacatcaagtgattacgggatctattaaagatctc
tcgttgctgacagggatatataatcccgcgaagagggccgactggatatatcaggttttg
aggccatgcagtattagcgtagccggttctacgccagaaggcaaagggcttcacttagag
gtccgttgcacggatatacatatgtctgtttctccaggtgtgatcgaaatattgaataag
gtcattcatatggtgacgaaaaaggaggaggaggacatggaagtcgttaagtccgagccc
aattatgaaggattgtggattgttacgccattcgaagataacaattactggttcttaaag
acagaagtcgcgatggaagcgctcgaggagtttacgtatccagacgatgacgttgtggcg
acctacaagcccgaattagcgattgtctcagcgcctacaatcttgttcaccctagaggct
ggtgtcggcaacaaaactcttcccatgttactgcttcacgtgggattcgaaagcagcatt
aatgattggagtacaaaatccatgagtgtagactgctcgatgtcagtgatcatggcgtat
tataacagtcgccttgctctgtgggaaccgctgatcgagccgatagaaagttccgataat
ggtaaacgcatctcaacgccgtgggaactaaaaacgaagatccaatttaacgacataatg
ttagactctaaaggcgccagcgcgatcagcccgatttcagaaagtgaacccgaagagcta
caccagtctactaagatgtccatcgatatcacatcctctgataatctggagataactgtg
acgaagacgtgtttagatgtgttgaaacaactcggtcagtcgttttcctcggctatggag
gccagcgggaaaggacccaccaaaaaagtggcaccgtacatgctgaagaatgaggccggc
ctaccgatcatactcaatctcgagcacagtctcttcaagatttttgatgaggaagaacgt
aatgacaagattatggaagtgatccttgaaaccggtgcgtcgctagaactcgcaccgaag
acatccaagctggttgacacgcgtcttcttgagcaattgaaagtggagaccgtgaaggac
agagaagacactaaattttctatacgttttaaagatggtattcaaagcaaattgacaata
cctgtgttaagagcggataggcgattcttttctatgaagcaccgaaaggatggctccgag
gaatggggtattgtgtcggacgtcattgtggaggagggtagtacgattgtcactcttcga
agtgttcttcaggtccacaatcacttcgcgcaaccgatatctgtttattatatgacgaag
cgtggcaatgaagtggaatgcgtgggtacagtggcaccggatgaaaagctcaatttacct
ctggacgcggtgtataccccaacaaatatttactggctatttttcagtgtcgatggatat
atggtgtcggttgagccatttgtctggaaggacttgcagaaaactgtttctatgacgaaa
ttgttaaaatgcgagtcgcgatccaagcaggacaccacagaaccattttatattcaggcg
gtgggagagatcgaacaggtgtatttcgagaataccactcgtcacaccatggctagtact
gtctacaatgttcacctgtacccatctgtgtatctgaagaattttctaccgattgacatc
attatctgcttgcctggcactggtcaggaaagcttgctcgaagcaagtgcttccctgcaa
cttcctacgattgatccagccaagtcaaatataataattaagctacccaattacttggag
aaagattggtcatgcaaaggtgagattgtagcaaacccaccagaattcgctgtctggtca
tttgaatctttcgacagcgcacagaaagtgatcttagatctcgggatgcacacgtctcac
aagcatggatcgatcatcatggcactatactgtcccttctggatgctgaacaagactggt
ttaatgctgtcctatagaacaacggacgattacctgaacgtattgtaccatcctgagcat
ttcaagggacctattttgttttcgttccgctccaaagccttcttcggtaagaagaaggcc
atgatcagagtggaggatggagaatggtccgataaattctccatcgatgtcgcgggaagc
gagggtgtggtggcctgcaaatacaatggaatgatatatcagattggggtgcacaatcaa
ctgacttacaactcattgaccaagcaaattacgtttacaccttattacatactcattaat
aatgcagatttccttatagaatgtcaggagggtgatcgaccagctgatccaatgattaaa
gtacttcctggtgaatgtgcggctctatggcctcgaaccgaacacgagagcaagactctg
aaagctaaggtttcgggtcaaccagagaaaaccgcagcgtttatttataccgatagccac
acgactctgttaaaattggacaataagtatggagggatcaatgtagacgtgcagattagc
gaaggtggcgtttacatttctatgtcggcctatagtccaggtaacgcgccagcattgatc
attaaccatacaccgcactgcatcaatctatgggaaaaaggttcgattaacattaggtcc
gtgcaatcgaacaacaggatgttttatacatgggaaaatccggccggcccacgaacgttg
gtttgggaagataacaatggcaaggaaatcgaggacaatcttcgcaaggataatcttggt
acctttcacttgccagatgtagatgagaaattattctatgtttcattcctggacggtact
cagcgagtgctattgttcaccatgaatctaaagattgccgaagattgccagctggctggt
gatcttgaagtgatagatcaggaaatcatcttgaacattcatggcattggattctccctt
gtgaacaatatcaccaaatccgagttgttgtacatgtgtgtcgctagctctggaattata
tgggagacacgaaagtccctcggtagccgatggcgagcgttaaatgccaaggaagtcaat
gccattgaggaaggatatcaacgatacattagagaattacaaatcaacaaggaagcagac
tatcggataatgttggagccaaaactaatggtggattatatgaatatggagatgctgagg
ccacatcgtagatacatgcgacgcacgtttcaaactgggctttggttgcagtatcgcact
tcagctcatcaagtgcaactacacgcgaagattaacaagcttcaaatcgacaatcagttg
tcggaatgcgtctttcctgttatattggctccggtgccaccgccgaagagcgtcacgcaa
agtacagtcatgaaacctttcgcggaacttagtatggttaagcgcctgttggagcacagc
accgtgcaacaattccgatacttcaaggttctcattcaagagtttcacattaaggtggac
atcgtttttataaacgcgatagtgggtctatttgaagcggacgaggttaacgaaacagaa
gagagtactttattccgtacggatatgaaactagtcaacgaaccgttaatgtaccatgtc
agtctgattaccacggccgagcaaaagaacttcttcgatctattgcatttctcacctctc
aagatacacatcagtttctcaatgaccggaagcggaggaggaccttccgccttaccgcaa
gtacttaacgtgttgctacaaggaattggtgtgacgttgacagatatcaacgatattgtg
ttcaaactcgcgtattttgagagaaactatgtattcatgacgcacaagcagcttgtctcc
gaggcgagcactcattacgcgggccaagcaatcaagcaggcatatgtactcgtgctggga
ctcgatgtgatcggtaatccatacggactcgtggtcgggaccatgaagggcatcgaggac
ctgttctacgaacccttccaaggggccatacagggtccaggggagttcgcggagggcctg
ttcctcggggtgcgcagcatgttgggccataccgtcggcggaatggcgggcgctgtgtcg
aagatcacgggagcgatgggcaagggtatagctgctttgactttcgacaaagattaccag
cgaaaaaggcaagaacaactcaacaagcagcccgccaacttgcaagaaggcctcgcacgg
agcggaaagggtttagtaatgggtgtggtcgatggtgtaacgggtgtggtgatgaaaccc
atatcaggggcgaaggaagaaggagtggagggattcttcaaagggtttggaaagggtgtt
gttggacttgttactaggcctaccgctggtattgttgactttgcaagtggttcctttgga
gctgtcagacgagccactgagctgagtgaagaagcaaagagagtacgaccgcccagattt
ctgcaaccagacagtcttgttagaccgtacataaaggatgaagccgaaggcaacaagata
ttgatggaattggaaaaaggaaaatatgcgcacacggacgtttacatctaccacgtgttt
atcaacaaagatgtgctgttgcttaccgacaaaagattatcgtatctcgaacgcaatgac
ttgtttggtggctggcgagttgactggactcatacgtggaacgagtttagtgaaccagca
agagtcgtagaaaaaggtgtacagatttttattaaagacgctagtaagaaaaagaaactt
ggtggtctatttggcagtgcggatcaatcaaaaatacttttaatatcggatcataatatt
aagcagttgttgtacaaaaagatacaggagcagattaatcagtccggaatataa
DBGET
integrated database retrieval system
