Solenopsis invicta (red fire ant): 105202412
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Entry
105202412 CDS
T03916
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soc01009
]
105202412
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202412
Enzymes [BR:
soc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105202412
Protein phosphatases and associated proteins [BR:
soc01009
]
HAD phosphatases
Fcp/Scp phosphatases
105202412
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105202412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BSH_Fcp1
BRCT
PTCB-BRCT
LIG3_BRCT
BSH_YknX
Biotin_lipoyl
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105202412
NCBI-ProteinID:
XP_011169219
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All DBs
Position
7:11439494..11445922
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AA seq
814 aa
AA seq
DB search
MLTWVVFTSRVVFVSRANTQERFSRARLRRYNSIFTPLITESRYLCAPNVRECAIMAAIE
VTFPSDGSPGKILKWRVRSDTMVAAGRILLVYQNATLPAADAVDDEKAKEPERKLRAANF
GRVKQLLVKEGDIVQPGQVIALLEGCTHPTVMIDLCAECGADLRVQETNKDGNVAGVSQA
SVPMVHSIPELKVCPELAEKIGKEDEQRLLRDRKLVLLVDLDQTIVHTTNDNIPPNLKDV
FHFQLYGPNSPWYHTRLRPNTRRFLSKMSSLYELHICTFGARIYAHTVASLLDKDKVLFS
HRILSRDECFDPASKTANLKALFPCGDDLVCIIDDREDVWQGCGNLVQVKPYHFFRHTGD
INALPGLEKVDVSRLSEPVNANESCTNESQDKDSKNDTSKSSNEIGQPLDSLSVKETNHE
DEKDEKTDEETKNEKEEDTKVNTEKDAESNIQSNTARESDKTDKEVTEVGPSVETDKDNK
QAMPKQDSDIIDEDDDDYLLYLEDILERIHREFYKTLDQENTRKSLRDIIPRVRSQVLKG
VCLTFSGLIPTHQKLHQSRAYKVARAFGAEVTQELTEKTTHLVAIRKGTAKANAAKKHGK
IKIVNSDWLWTCAERWERVEEDLFQLTSQARGSRVPPPHCSSPERIEDVESDNTNSFANS
INPLMSFTQEEIEFMDKEVDEDMEDMVLEDEEDADDAEECGTRTRRLSSDSEDSMNDADE
LGVSRKKKRKIYNGKSDKGSSKDKDDNRDSDDDDNNDSDDDDLGARFRRGGELPDDLDLG
DNSQDSVDDLEDDNEDDREWNALGAALEREFLSE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtgggtcgtgtttacgtcccgcgttgtttttgtctcccgcgcaaatacgcaa
gaacggttctctcgagcgaggttaagaagatacaatagcattttcacgcccttgatcacc
gaatcgcgttacctttgcgctccgaatgtgcgtgagtgcgcaattatggcagcgatagag
gtcacatttccgtcggacggatcgcccgggaaaatcctgaaatggagggtacgctctgac
acgatggtcgcggcgggcagaatattattggtgtaccagaacgcgacactgcccgctgcc
gatgctgtcgacgacgagaaggccaaggagcccgagcggaagctgcgggctgcgaatttc
ggtcgcgtcaagcagcttctggtcaaggagggtgacatcgttcagcctgggcaagtgata
gctctattggaaggatgtacacatcccactgtgatgatagacttatgcgcagagtgtggg
gctgatctgagggtacaagagaccaacaaagatggaaatgtagcaggagtatctcaagcc
agtgtacctatggtacacagcataccagagctgaaagtgtgtccagaattagcggaaaaa
attgggaaggaggatgagcaacgtcttttaagggatcggaaattagtgctacttgtggat
ctcgatcaaacaattgttcatactacaaacgataatattccacctaatttaaaagacgtt
ttccattttcaattatatgggccaaactccccgtggtatcacacccgattaaggccgaac
actcggcgttttctctcgaaaatgagcagtttatatgaattacacatttgcacttttgga
gcaagaatttacgcgcacactgttgcatcattgcttgataaggataaagtcctgttctct
cacaggatactttctagagatgaatgttttgatccagcgtccaaaactgcaaatctcaaa
gctttatttccatgcggcgatgacttagtatgtatcatagatgatagggaagacgtgtgg
cagggatgtggaaatttggttcaagtaaaaccttatcattttttccgccacaccggcgat
attaatgcactaccaggcttggaaaaggttgatgtatcacgtttgtcggaaccggtaaat
gcaaatgaatcctgtacaaatgagtcgcaagataaggatagcaagaatgatacatctaaa
tcttcaaatgaaattggacagccattagatagtctctctgtgaaagaaacgaatcatgaa
gatgagaaagatgagaagactgacgaagaaacgaagaatgagaaagaggaagataccaaa
gtgaatactgaaaaggatgcagaatctaatattcaatctaatactgcaagagagagcgat
aaaacggataaagaagtaacggaagttggaccatctgtggaaactgataaagataacaag
caagcaatgccaaagcaggacagtgacataatagatgaagatgacgatgattatctatta
tacttagaagatattcttgagagaattcatagagaattttacaagacactggaccaagaa
aatactcgaaagtctttacgggatataatcccgcgagtgcgctctcaagttctgaaagga
gtatgcttgactttcagtggcttgataccaactcatcaaaagcttcaccaaagccgcgcg
tataaagtcgcaagagcattcggagcggaagtgactcaagaattaacggagaagaccacg
catctggttgctattagaaaaggtacggcaaaggcaaatgcagctaaaaaacatggaaaa
ataaaaattgtaaattcggattggttgtggacatgtgcagaacgttgggaacgtgtggag
gaagacctgtttcagcttacatcacaggcacgcggatcgagagtaccaccaccgcactgt
agtagtccggaacgtatcgaggatgtagaaagcgataatacaaactcctttgccaactct
atcaatccattaatgtcatttactcaagaggagatcgaatttatggacaaggaagtagac
gaggacatggaagatatggttttagaagacgaagaagatgcggatgacgcggaagaatgt
ggtacgaggacacgacgcctaagttccgattctgaagattctatgaatgatgcagatgaa
ttgggcgtttcaagaaaaaagaagagaaagatttataatggcaaatcagataaaggttct
tccaaggataaagatgacaatcgtgatagtgatgacgatgacaataatgacagtgatgat
gacgaccttggtgcacgttttagaagaggaggagaattacctgatgatttggatttaggt
gataactcacaagattctgtggacgatcttgaagatgataacgaagatgacagagaatgg
aatgcattgggtgctgcacttgaacgagagtttctttctgagtga
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