Solenopsis invicta (red fire ant): 105202710
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Entry
105202710 CDS
T03916
Name
(RefSeq) m7GpppX diphosphatase isoform X2
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105202710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105202710
Enzymes [BR:
soc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
105202710
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105202710
3'-5' decay
Other 3'-5' decay factors
105202710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
105202710
NCBI-ProteinID:
XP_011169658
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All DBs
Position
12:complement(20906037..20914246)
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AA seq
352 aa
AA seq
DB search
MTTVAEKCASANDEDCPPAKKVKLDDGNLTDVVEKNSDENDTSEKELDLSDFKVTRVLQN
NCARKLICMEGTFEDRDGSAVVLLEQRSFPYDKVVLEKDFFDGKTIFKRIFSNDVYKNYS
CFPTEERNGLQATVIYPATQTHIDKYKRQELFMIDETYELYQQVTLPYIESKSLSLEWIT
NILEHKAEQESIIYEDPDKDSGFVLVTDFKWDKQKDTLKLLALPYQKIRSLRELNGSHLP
LLKNIRDAGTAAISKKFDIPASQLRMYFHYQPSYYYLHVHFCYLMFEAPGIYAEKAHLLS
TVIRNLELMSDYYTKAVLSYVVFKDSPLYEKFKSHGALQTLTCEPQQTVNTV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgtggcggaaaaatgtgcaagcgcgaacgatgaagactgtccgccggcgaag
aaagtaaagttggacgatggaaatctgaccgacgtggttgagaaaaactcagacgagaat
gacacgagtgagaaggagctggatctgtcagacttcaaagtgacgagggtgctgcagaat
aactgcgcacggaaattgatatgtatggaggggacgttcgaggaccgtgacggttcagcg
gttgtcctgctcgaacagagaagttttccctatgacaaagtagtcttggagaaagatttc
ttcgatggaaagacgattttcaagagaatcttcagcaacgacgtctataaaaactacagt
tgctttccaaccgaggagcgtaatggcctgcaggcgactgtgatataccctgccacgcag
acacacatcgacaaatacaaaaggcaggagttatttatgatagatgaaacctatgaactt
taccagcaggtcactctcccttacatagagtcaaagagcctcagtttggagtggataact
aatattctggagcataaagctgaacaagaaagtatcatttacgaggatcctgacaaggat
agtggttttgtattagtgacagatttcaaatgggataaacagaaggatacgttgaagctg
ttggccttgccataccaaaaaataagatcattgagagagttgaatggatctcatcttcct
ttgttaaaaaatatacgagatgctgggacagcagcgattagtaaaaagttcgatatacct
gcgtcacagctcagaatgtacttccactatcaaccatcatattattatctacacgtgcat
ttctgttaccttatgtttgaagcaccagggatatatgcggaaaaggcgcatcttttatcg
acagttataagaaacctagaactgatgtcggattattatacaaaagcagtactttcatat
gtagtgtttaaagatagtcctctttacgagaagtttaaatcgcatggagccctgcagacg
ttaacatgtgaaccgcaacagactgtaaatacagtgtag
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