Solenopsis invicta (red fire ant): 105202718
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Entry
105202718 CDS
T03916
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202718
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
105202718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
TFIIA
Motif
Other DBs
NCBI-GeneID:
105202718
NCBI-ProteinID:
XP_025991974
LinkDB
All DBs
Position
12:complement(20988223..21022368)
Genome browser
AA seq
2025 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTSLCGIKWRKLVWGEVAGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATPATSGPATAGASSAPMFSDMSIAPSPAPPPLSLTAAKELWIFWYGE
EPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQ
PYNGYEKHRCSSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTKTCLQRTQTSQSGVK
VILAPYGLAGTLTGQVSRMDSQLLEEWKHFYPISTGSNPETGLPPLVEVLVGGVRMRYPS
CYVLVTDMDDTPPETPLSPPSSPVTCERPLLMQQELSAATELPERVWAECTLSSPVSASK
TESSMEPGTWTFVEPTQKSSCTCSCSKYTTPGGWKSLASSQVQRERVDKGGRRVVPFHRR
STTQWDACPSVPANAPRSVLSRTEAPSTPPGGPPSYSRGPPTGGDCLPVPSVGSPGSPAP
SPLLTPHSEPASVPPAEPTMPTLSPQPPPSHTNTAPPLTPSQGPKSISSACNNQVHSPSV
PGPILKRPILVSREYEGALLEDEQPLSELYNYSLQEAWLNHPVKRFKAMNISNPPINRSN
VLYPPMKSQALQSQAPKLEIKQEPVEAGECIGRRTDPYEFDATGEENGTNVDGLRRQRDD
PSKPGSLFTSEGLQPSYKDLDQIFDNSDPDTSSDETNLNQLQIQTPPGSNKSGGLHEETR
VDGANKNNNRGVTVLRPEELSKMFPTPPSLEHNPVASPCQLSDPLMDQTELLMPSRPLRH
LPDIYPNMGSPQEEPIDDWSYVFKPAAISKMVGSSKYAPLTNLPSQSLPSITLPSHCVYR
PSWQCNPASTNQADKPLPPTRPGSVQQQQQQQQQQQQQPQQQQQQQQQQQQQQQPCPQSP
APPYRSNTLPGRPPPPPYDQPSPATSTTSSYLNKNLNSIEADTPGPARAPESNSLVVNIL
LGDTALNIFRDHNFDSCSLCVCNAGPKVVGNIKGADAGVYLSNSWVSSGLFQDDDQIRCS
CGFSAVVNRRLAHRAGLFYEDEMEITGVAEDPAEKKKGSLTSVACPGAKATSEGLDTIPP
NVLELLREQCLIVQSSASSLYRAARICATVKSYPTLTPTVNTLEFNDGNEVCVAALDQGK
LDGAHNERAARVNGVHRWVFLRARGPQCSGDIVRMMRSLQPLLQDAVQKKCTTRMWEAPY
TVAGPLTWRQFHRLAGRGTDDRCEPQPIPALVVGYDRDWLSLSPYAVCFWEKLSLEPFAG
PRDVAYVVVAPDSDCIVSRVKSFFRELSCTYEICRLGRHTPISKQLRDGILRVGKSTVQK
LAKQPIDDWFKFLGENHIGELLRLYAQVCNHRLAPYLTQVIQDRSLLDSSDSQPANKQQQ
QQSATIPVPDTMPATPDVLTTKPESVEGENPRSETPSSSTATNNQSTTNTAGNTTPTSQT
TSNTTPITTTTGPDEEEIEPPAIVVYFVEPFSLGGTEDPDRRRLAILALLRAYSTAINSM
PENMRSNIHVQLISLESIMELGRARERRKIQDEMRALALNVFLQGRRLLNHNSTVKSLTG
FGTAAAADLFLKSKDERNRAPYRLYAPAFVLAPLRAKSEAPESFGMPRPEECAVLYLSYC
LSEDQSWLLAAATDDRGEIFETATINIDIPNRKRRKRASARRIGLQKLMDFILGVMSQGV
QPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASKHLKEICGQCSLLYPSAAPCVLSACL
VSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQDVTCTHILVFPTSATTQSSQTAFQE
QHNVPELGDDELFSALNDDMPEGMEGMGDFNDIFNVWPEPGAGGGQSPSGSPHRPEGSPH
GGDGGGSGLGNHDGPGSPFPCSNTPRIATTEQAEEVGTLLQQPLALQPLALGYLVSTAPT
GRMPPWFWAACPHLENVCPVFLKNALHLHSPAIQQNSDDLLQQQNAPTAHPLDSQYTTDV
LRYVLEGYNALSWLALDANTKDRLSCLPVHVQALMHLYHATAALV
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgtcgcatcaaaccaacggcgccagcctggaggactgccacacgaatttc
ttcgcactgacatccctctgcggaattaaatggaggaagctcgtgtggggcgaggtggcc
ggtggcttcggcggcacgcccctcgaagacccggtgctgtcgagtttttcgcgatgttta
gctggtgacattctgtgcgtgtggcgacgagtggccgccacgccggccacctccggtccg
gcgacggccggtgcctcctcggcgcccatgttcagcgacatgagcatcgcgccctcgcct
gcgcctccgccgctctccctcaccgccgccaaggaactctggatcttctggtacggcgag
gaacccgatctctccggcctggtatcgccggagctcatcgcttgcgaaagcgagcagggt
tcttgggaaagcggattgtcgtacgaatgccggtcacttcttttcaaggctctgcataac
ttgattgaacggtgtttgctatcccgtgacttcgttcgcttaggaaagtggtttgtgcaa
ccttacaatggctacgagaaacaccgttgtagcagcagccatctgtccttctcgtttgca
ttcttcgttcacggagaaagcactgtgtgcgcgagtgtggacgtcaggcagcatcctgcg
gtgcgacatcttacaaagacgtgtctacaacgtacccagacctcccaatccggcgttaag
gtgatcctagctccttacggactagcgggcacattaacgggtcaggtgagccgtatggac
agtcaacttctcgaagaatggaaacacttctatccgatcagtaccggcagtaatccagag
accgggcttccacccctcgtggaggtcctcgtcggtggcgtgcgcatgcgttatccttct
tgttacgtcttggttacggatatggatgatacgccacccgaaactcctctctcgccgcca
agtagccccgtcacttgcgaacggcccctcttgatgcaacaggaactgagcgcagctacc
gaattgccggaacgcgtgtgggcggaatgtactttgagttcaccagtgtctgcttccaag
acggaatcttccatggaacctggaacctggacgttcgtggaaccgacgcaaaagtcttcc
tgtacctgttcatgttcgaagtatacgacccccgggggttggaagagcctggcctcctct
caggttcagagggagagggtagataaaggtggacggagggtcgtaccgtttcaccgacgg
tctaccactcagtgggacgcttgtccctctgtccctgctaatgcccccaggtcggtactg
agtagaacggaagcacccagtacaccaccgggcggtccaccttcctactcgcgcggacca
ccaacgggaggagattgcttaccagtgccgtcggtcggctcgccaggttccccagcacca
tcgcctcttctgactccgcactccgagccggcatcggtcccgcccgcggaacctacgatg
ccaactctcagcccgcaacctccaccaagccacacgaacactgccccacccctaaccccg
tcgcaagggcccaagtctatttcttccgcgtgcaacaaccaggtgcacagtccgtcggtt
cccggaccgatattaaaacgaccaattttggtatcccgagagtacgagggtgctcttttg
gaggacgagcaaccgttatccgagctctataattactcgctccaggaggcttggttgaat
catcctgtaaagcgtttcaaggccatgaacattagcaatccgccgatcaatcgaagcaac
gttctctacccaccgatgaaatctcaagcgctccaatctcaagctcctaagctggaaatt
aaacaagaacccgttgaagctggcgagtgtattggaagaagaacagatccatacgagttc
gatgcgacaggcgaggaaaatggtacgaatgtcgatggtctcagacgacaaagggacgat
ccatctaaaccaggatctctatttactagcgagggtctccagccatcttacaaagaccta
gatcagatattcgacaactccgatcctgatacttccagcgatgaaacgaatctgaatcag
ctacagatacaaacgccaccaggctcgaataaatctggtggattacacgaagaaacgagg
gtggacggtgcgaacaagaataataatcgaggagtcactgttctacgaccagaagaacta
tccaaaatgtttccaactcctccttctctagagcataatcctgttgcctcgccttgccag
ctaagtgaccctctcatggaccagactgagctgctgatgccctcacgaccgctcagacat
ctgcctgacatctatcccaatatgggctctccgcaagaagagccaattgacgattggtca
tacgtgttcaagccggcagccatcagcaagatggttggttcttccaaatacgcacccctc
acgaatctgcctagccaatctctgccatccatcacactgccatcgcactgcgtgtacaga
ccttcctggcagtgcaatcctgcttccaccaatcaggccgacaaacctcttccaccaacc
aggcccggatcagtgcaacagcagcagcagcagcagcaacaacagcagcagcagccgcaa
caacaacaacaacaacaacagcagcagcagcagcagcagcaaccttgtccacaaagtccg
gcgccaccttaccgttcaaatactctgcccggtagaccaccaccacctccatatgaccaa
cctagcccagctacatccactacttcttcgtatcttaataaaaatctcaacagcatcgaa
gcggatacaccaggacccgctcgcgcgcccgaatcaaattcccttgtagtgaatattctt
ctgggtgacactgcacttaacatcttccgcgatcataacttcgatagttgcagtctgtgt
gtgtgcaatgctgggcccaaagttgtaggtaatattaagggtgccgacgcgggtgtttac
ctcagcaattcgtgggtgagttccgggctcttccaagacgacgatcaaatcagatgtagt
tgcggttttagcgctgtggtgaatcgccgactcgcgcatagagcgggtctgttctacgag
gacgaaatggagatcacaggtgtcgccgaagacccggcggagaagaaaaaaggttcactc
acttcggtcgcgtgtcccggagcaaaagcgacctcggagggcctcgacacgataccaccg
aatgttctcgagttactgcgtgagcaatgcttgattgttcaaagttctgccagcagtcta
tacagagcagcaaggatatgcgccaccgtgaaaagttatccgacattgacgccaacggtg
aacactttggagtttaacgacggtaacgaggtgtgcgttgccgcgctcgatcaaggcaaa
ctcgatggtgcgcataacgaaagggcagcgcgggtgaacggcgtgcatcggtgggtgttt
ctcagagcacgaggtccccaatgcagcggcgatatcgtgcgaatgatgaggtcgctacag
ccgctgctccaagacgcagtgcagaagaagtgtacgacgcgtatgtgggaggcaccgtac
actgtcgccggaccgctcacgtggcgacaattccatcgtttggctggccgcggcaccgac
gatcgttgcgagccacaaccgatacctgctctagtcgtcggatacgatcgcgattggctg
tccttgtcaccatatgcggtctgcttctgggaaaaactatcgttagaaccgttcgctgga
cccagagatgtcgcttacgtagtcgtcgcacccgacagcgattgtatcgtcagtagagtc
aaatcgttcttccgagaactttcctgcacgtatgagatttgtcgattaggaagacatacg
ccaatctcgaaacaactacgagatggaattttgcgcgtcgggaaatcgaccgtgcagaaa
ctggcaaagcaaccaatagacgattggttcaagtttttgggagagaatcatataggcgaa
ctgttaagattgtacgctcaagtgtgcaatcaccgattagctccgtatctgacgcaggtc
atacaagatcgtagcttgttagattccagtgattctcaaccggccaacaaacagcagcaa
cagcaatccgcaacaattcccgttcctgatacgatgccagctacacccgatgtattaacg
accaaacccgaatctgttgaaggggagaatccacgaagcgagactccctcctcgagcaca
gcgacgaataatcagagcactactaatacagctggtaatacgacaccgacttctcaaact
acaagcaacacaacgccgattactacaaccacaggtccagacgaggaggagatcgaacct
ccggctatcgttgtctactttgttgaacctttttcgttaggcggcaccgaggatcccgat
cgacgacggctcgctattctggctctactcagagcttactctactgcgatcaatagtatg
cccgaaaatatgaggtcaaatattcacgttcagctaatatccttggaaagcataatggaa
ttgggtcgagctcgagaaaggcgaaaaattcaagatgagatgagagctttggctttgaat
gtctttttgcaagggcgtagattattgaatcataattctacggtgaaaagcctcaccggt
tttggtactgccgccgctgcggacctcttcctcaagagcaaagatgaacggaacagggcg
ccttaccgtctttatgcgccagcctttgtgctagcaccgttacgggcgaagagcgaagct
cccgaatcgttcggcatgccaagacccgaggaatgcgcggtgctttatctgagttactgt
ttgagcgaggatcaatcttggctattggcggccgcgacggatgacaggggcgaaattttc
gagaccgctacaattaacatcgatatacccaacaggaaaagaagaaagcgcgcttcagct
aggcgcatcggtcttcaaaagcttatggactttatactgggtgtaatgtcccagggtgta
caaccttggagactggtcgtgggtcgagtaggacgcattggacatggcgaattgaaagga
tggagctggttactttctagaaaagcacttttgaaagcttcgaagcatctgaaagagata
tgcggacagtgtagtctcttgtatccttcggcggcaccttgcgtgctcagcgcatgttta
gtctcactcgaaccggattccactctgagattaatggccgatcaattcactcccgatgaa
agattcagtcaggcgtctgtaaactgccagttatccacacctcaagatgtcacgtgtact
catatacttgttttccctacatccgctaccactcaatcgtcgcagaccgcatttcaagaa
caacacaacgtacccgagttaggagatgacgaattgttttccgctctaaacgacgacatg
ccggaaggcatggaaggaatgggtgattttaatgatattttcaacgtttggcctgagccg
ggggcaggcggtggacaaagtccaagcggaagtccacatcgtcctgaaggttcgccgcat
ggaggagacggcggtggatcgggcttaggtaatcatgacgggccgggtagtccatttccg
tgcagcaatacgccaagaatagcgacgactgagcaggcagaagaggttggcacgcttcta
caacaaccactcgctctacaaccactcgctcttggttatctagtatcgactgcgccaacg
ggacgaatgccaccatggttttgggcagcttgtccacatctcgaaaatgtttgcccggta
ttcctgaagaacgcgttacacttgcacagtcccgcgatacaacaaaacagcgacgattta
cttcagcaacaaaacgcacccactgctcatccgttggactcgcagtacaccactgacgtg
cttaggtacgtgttggaaggatacaatgcactgtcgtggcttgcactggatgcaaacacc
aaggaccgactgtcttgcttaccagtgcacgtacaggcgctcatgcatctttaccatgca
acggcagctctcgtctga
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integrated database retrieval system
