Solenopsis invicta (red fire ant): 105202873
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Entry
105202873 CDS
T03916
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105202873
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
Other 90S particles
105202873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_19
OB_RRP5_4th
ARM_TT21_N
TPR_15
HAT_Syf1_M
ARM_TT21
ARM_TT21_5th
TPR_6
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
105202873
NCBI-ProteinID:
XP_039302967
LinkDB
All DBs
Position
3:complement(1515842..1523817)
Genome browser
AA seq
1410 aa
AA seq
DB search
MTLESFPRGGKELQVKRPADVLFEENRKLKKSKTQAKKKNDVTVEETNLVATTADRLSKM
MLREGLVLLGRVFEASEYDLLISLPGGFIGRVQATDLSQTYTNLLQDIINTKTVQSNEFK
PLPDLFKPGDYVTCYVKNINAEDKWFCSLSLEPQLINQNVQSYCLAKDVNVICTVKSIED
HGYVVDTGIANVRAFLSTEDVEGRQYFPGTQLLCTIKEIKTEDHMSVIKLSTKRKKINTE
REIKSLDILTPGTKLPLRIMKVLSNGVQVMFGKNNVGYINRIYLNNPLSTYEEDVEITGT
LLYILPTVKLAYFSLLTDMSEKEKLRKGDIINKAKVLYRESGGIILKLSKSGLRGYMPLR
RTGVPFTKISTEFKEGSTHKCRILAYGWMEHFYICTMEEDILKQKYFSVFDLGIGDILTV
TITHIETVRGYIHVQAGKIWGHVPMEHISDSGLSVLHKLKIGDKVEARVLDNNYNENQIK
FTLKQSLIKSKLPVLHDFGEAVCGSKYHGTITVINKNGLLVRFYGNVKGWVPRTTLDRDT
CNMNWNFSVGQTVMVCVDSVEQDKHKMKLRIVTEKEEKQQAISFSIGETVEGTVTESSIK
GVYLKVQKEGNTGNIVTGFLPAGHMAPCIEIGSLLASKCTPGDVISAFVFATKPMLLLSR
TFVTQKKYRSFDSLKVGDCIPCTIRDMLQAGVRVVLPIENYPKFGFVSYKNVSNFEQLHT
NQILFVKITAINTKEKLLTLTMSLKDVWESTSEYEVKMMTAVDVLSLYLNKFSELTKNTF
YENKLISTVNLGQKVTGIVKNITEHGLILQLDNQLTGTVRKDHYIGDPQLGDKVFGTILW
KNYVHELVDVSLLPRIINGISSRQKTLPELPTGIVLKAEILMITKWLILVLVKRNGVGYL
AALPVRRHANDSSPDLTPYKVHAKIRLYVITRKHETDIVPICMLKSAFETPKDKIIREPS
SIMNKQSKKKKKKSKLHEVDLINSPKDVLKEVSKEASRDKANEEKSKSEIKENSRIKDIN
PPKEVSKEVSKAAPRDKANEKKNKSKIKENSRIKDIDESSESDESEMEANESTNRLRVPE
CGFSWENKAKLTVSINIETSSDNEEPEEEPKRKKKKLSAAERREQERQKEREIRQREEAL
ASNQTPNSIDQFDRLVLSSPDSSLVWLRYMAYHLQATEIDKARAVARRAIKTINFREENE
RLNIWNAWLNLESRYGTAESLNDVFQEAVRTNDAYKVYMHMLTVQADAGRKNELEKLIST
VIGKFKQDPQTWIDCGTALLKIGMKEKSRQIMQRALQSLPASQHINLLVRFANLENKLGD
QERAQTLFENILSSYPKRVDVWSCYVDCLIKSENIDLARKVLERACVQTLPLRKMKTLFT
KFINFEEKYGTSEAVARVRQMAADYVENHI
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgacgctagaaagttttcctcgaggagggaaagaacttcaagttaagaggcctgcagat
gtgttatttgaggagaatcgtaaactcaagaaaagtaaaacacaggcgaagaagaaaaat
gatgtaactgtagaagaaacaaatcttgttgctactaccgcggaccgattgtccaaaatg
atgctgcgtgaaggactggttctccttggtcgagtttttgaagcatcagaatatgatctg
ctgatatctcttccaggtggattcataggacgtgtacaagctacagatcttagtcagaca
tacacgaatttgttgcaagatataatcaacactaaaaccgtccagtcaaatgaattcaaa
cccttgccagatttatttaaacctggcgattatgtaacttgttacgtgaaaaatataaat
gccgaagataaatggttttgtagtttatctttggagccacaattgataaatcagaatgtt
caaagctattgtcttgcaaaagatgtgaatgtgatttgcactgtcaagagtattgaggat
catggctatgtagttgacacaggtatagctaatgttagagcatttttgtctactgaggat
gtcgaaggaaggcaatattttccaggcactcaacttctgtgtactatcaaggaaataaaa
acggaagatcacatgtctgttattaaattgtcaactaaaaggaagaaaatcaacactgaa
cgtgagataaagtctttagatattttaacgccgggaacaaaattgccacttcgcataatg
aaggtgctctccaatggtgtgcaagttatgtttggaaaaaataacgttggatatataaat
cgaatttacttgaataatcctttatccacatacgaagaagatgtggaaataactggcacg
ttattatatatattaccgactgtgaaattagcatatttcagtttattaaccgatatgtct
gaaaaagagaagttgcgcaaaggtgatatcataaacaaggccaaggttctgtacagagaa
tccggcgggataattctcaagttatctaaatctgggctacgtggatatatgcccttgcga
agaactggtgtcccatttactaaaatttcaactgaattcaaggaaggttctacgcataag
tgtagaatactcgcgtacggctggatggaacacttttatatctgtacaatggaagaagat
attttaaagcagaaatatttttcagtttttgatctcggtatcggcgatatccttaccgtg
accatcacgcatatcgaaactgttcgtggctacatacatgtgcaagcgggaaagatttgg
gggcacgttccgatggaacatatatctgatagcggtttgagcgttttgcacaaattgaaa
atcggagataaggtcgaggcgagagttttggacaacaattacaatgaaaatcagataaaa
ttcacgctgaagcaatcgctgataaaaagtaaactgccagttttacatgattttggtgaa
gccgtatgtggatcgaagtatcatggtacaatcaccgtgataaacaaaaatgggttattg
gtaagattttacggaaatgtaaaaggatgggtcccacgcactacattagacagagatacg
tgcaatatgaattggaacttctccgtcggccaaacggttatggtgtgcgttgactcggtc
gaacaagacaaacataaaatgaaattgagaatcgttacagaaaaagaggaaaaacagcaa
gctattagcttctcgatcggagaaacggtcgaagggacagtaacggaatcgtccatcaaa
ggtgtatacttgaaagtacagaaagaaggcaatactggaaatattgtgacgggcttcttg
ccggcaggtcacatggccccatgcattgaaatcggcagcttgttggcgtcgaagtgcact
cccggggatgtaatttcggccttcgtgtttgccacaaaaccgatgttgctactgtcgcgc
actttcgtgacgcagaagaaatacagaagctttgattcgctgaaagtgggcgattgcatt
ccatgcacgattcgagatatgttgcaggctggcgtgagagtcgttctgccaatcgaaaat
taccccaaatttggattcgtgtcatataagaacgttagcaatttcgaacagttgcacacg
aaccagatattgtttgttaaaatcacagctatcaacactaaagagaaactattgactcta
acaatgtcgttgaaggacgtgtgggagagcacgtctgagtatgaggtaaagatgatgacg
gcagtggatgtcttgagtttatacctcaacaaattttcagagctgacgaagaacacgttt
tacgaaaataaattgatttcgacggtaaatctgggtcaaaaagttaccggtattgttaaa
aatataaccgaacatggtttaatacttcagttggataatcaattgacaggcacggtacgc
aaagatcattacatcggcgatcctcaattaggggacaaagtatttggtacgattttgtgg
aaaaattacgtccatgagctcgtcgatgtgtcgttgttaccgagaataataaatggcatt
agctcaagacaaaaaacgctaccagaattacccactggaatcgtattgaaagcggagatc
ctgatgatcaccaaatggttgatacttgttctcgtgaaacggaacggtgtgggatatctg
gcagcattgcccgtccgccgtcacgcgaacgatagttctccagatctgacgccttacaag
gtccacgcaaaaattcgattgtacgttataacgaggaaacacgaaactgatattgttcct
atttgcatgctaaaatctgcatttgaaactccaaaagacaaaatcataagggagccgtct
tctattatgaataaacaatcaaagaagaagaagaagaagtctaaactacacgaggttgat
cttataaattcaccaaaagacgtactgaaggaagtgtcgaaggaagcttcaagagataaa
gcaaatgaggagaagagtaaaagcgaaatcaaagagaacagtagaataaaagatataaat
ccaccaaaagaagtatcgaaggaagtgtcgaaggcagctccaagagataaagcaaatgag
aagaaaaataaaagcaaaatcaaagagaacagtagaataaaagatatagatgagagttcc
gaatcagatgaaagtgaaatggaggcaaatgagtcaacgaaccgattgcgcgttccagaa
tgtggattttcttgggaaaataaagcaaaattgaccgtttctattaatattgaaacgtct
agcgacaacgaggagccagaagaggaacccaaacggaagaagaagaagctgagtgcggct
gaacggcgggagcaagaacgacagaaggaacgcgaaattcgccaacgggaggaagctcta
gcgagtaatcagacacccaattcgatcgatcaattcgatagattggttttatcgagtccc
gacagctcgctagtgtggctgcgttacatggcgtatcatctgcaggccacagagatcgac
aaggcacgagctgttgcgagacgagccatcaaaacaatcaatttcagagaggagaatgaa
cggctgaatatatggaacgcgtggcttaatctggaatccagatacggcaccgcagagtcc
ctgaatgacgtttttcaagaagccgtgaggacaaatgacgcgtataaggtgtatatgcac
atgctgactgtacaggcggacgccggtagaaagaatgagctcgagaaattgatcagtacc
gtaataggcaagttcaaacaggatcctcagacgtggatagactgtggtactgctttgctg
aaaatcggcatgaaggaaaaatcacgacagatcatgcaacgggcattgcaatccttgcct
gcgtctcagcatataaacctgctagtaagatttgcgaatttggagaataaactaggcgac
caggaacgcgcacaaacattgttcgagaacatcctgagttcttatccaaaacgcgtcgac
gtgtggtcgtgttatgtggattgtttgataaaatctgaaaacattgatttagccagaaaa
gtattggaacgagcatgcgtccagacgcttccactaagaaaaatgaaaaccctcttcaca
aaatttataaatttcgaagaaaaatacggtacatctgaggctgtagctcgcgtgcgtcag
atggctgcggattatgtggaaaatcacatataa
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integrated database retrieval system
