KEGG   Solenopsis invicta (red fire ant): 105202938
Entry
105202938         CDS       T03916                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
soc  Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:soc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:soc03037]
    105202938
Cilium and associated proteins [BR:soc03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   105202938
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_WDHD1_1st WD40_CDC20-Fz WD40 TPR_12 Beta-prop_EML_2 TPR_7 WD40_Prp19 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd TPR_2 WDR55 Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st ANAPC3 TPR_COPA_B WDR90_beta-prop_4th TPR_8 Beta-prop_CAF1B_HIR1 Wzy_C_2 PPR_long WDR54 TPR_GEMI5
Other DBs
NCBI-GeneID: 105202938
NCBI-ProteinID: XP_011169934
LinkDB
Position
13:complement(14453202..14469457)
AA seq 1440 aa
MTLYFDIRVQNPESASISTLATWHNNYPLLAVAAYSQDKGGFVTIYDDQGEPVQDVESPG
HAVAQVTALGWHPEKTWLAAGWENGELRVWPGDTGTQEFNVVVTPHRESIMILQWSQYGG
RLVSADSGGFIIGWKIDSKGQLFMTFHHELKESFTQIAFRTVPLKPAIDISGLAKAAVAG
DERALDLFSSWRPRTAAPTAVPAQRDNHSFYIGTLNGIIYFVDAQGQCKEVLSTDGAALN
CLLYHQTRDSIIVMTEGLNIGHFQVNPINGELTELTKVKLSGRSDVSRATGTVLCWIGGN
TLSVLTGELAVRCWDLHTGDTYVLSPPDSSNGNIATPQEMFTSLTFCKGNDTLAAGTNLG
TIYLWKRKCVSDCDENSWPSIPESCTIHGTVKQLVWGVSLSRNSLLAVNCITNVFILHQQ
PMCAVYNDGVCASQLTPTQILLEMDEQMYTLKTEMQVQVIAVSREYIAVSSGRQINVNRI
NKGANLNTNVLATFSCDTEKMLIYEHTLIVLTPTIIQLRSIEGSVIQTLPTLPEEGEPIT
MELTGHYLTVASLNGILKIWNLGKHEAKLHTRAMATYEAISDFAEIIEARCNSDCRCVSI
TVAMANLMPSSVLYIWDIESDQIHEFDFGESNDLVDDDMLVAQCKGRLITAHCWDVEDPR
LLVCRAQRLESRDSKSFNKDNDRTVQASVVLVSLFATSDHGIVIQDVKPITDENCRLLGV
RSPHIVILNSEKSLDRNSKIIQLLMRDFEELGDCDSITKKAVMDFSYHISVANMEEAFKA
IKSIKNEAVWKSLAKMCVKTKQLNMALLCLGHMKQANAARALREAMQDDSLNLEAQVGIL
AVELGLHIDAERLFREAKRLDLLGRLYEARNKFKEAIELANNENKIREKTSYYNYARALE
QQGKMAEAIDMYTKADCHRFEVPRMLLTRPRELLTYLNNSEESEIKNWHAQYTESTGDME
TALHLYEQAKDTLSMTRLLCYFGREDEVCELVTRTNHAAAAYHLAAHYESKNNVVQAVHF
YTVAKAYTNAIRLCKEHSMLEELWPLAILAPRHSQIDVAKFYEDNDQPDRAVLLYHKANL
LHKALDVAFRMRQYSALQLIIMDVNADSDPALIHKCADYFMQNDQIDKAVDLLAIGRDYM
AALDLIQQHNVVLSEELAEKLTVEKGSDDDAEHERTRISTLEKIAEIAFEQGNYHLATKK
FTQAGNKLRAMKALLKSGDTEKICFFAQVSRNREIYIMAGNYLQSLDWQNQPEVLKNIIN
FYSKGKAMDLLANFYVACAQVEIDEFQNYEKALDALNQASRCLSKVMTPRDPDVHKRAVE
LVNNRMSAIKRYLDIKRLFERSETETAMQQVRHLLDSQGPNLEQSVRHGDLFAMITQHYA
NIGDTEKAWATIEELKRLVPGINLTYYFNVNLLEALGYKMKVHRQDSSDKDDGIEELLGE
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgactttgtattttgacatacgagtgcaaaatcccgagagtgcttccataagcaccctc
gcaacttggcacaataactatcctctgttagctgtcgccgcgtactctcaagacaagggt
ggtttcgtaaccatctatgatgatcaaggtgaacctgtacaagacgtcgagtcaccagga
cacgcggtggcacaggtcactgctctcggatggcatcccgaaaagacatggctagcagcg
ggttgggagaacggggaattacgagtgtggccaggggacactgggactcaggaattcaat
gtagtagtgactcctcatcgagagtccatcatgattctgcagtggagtcaatatggtggc
cgcttggtatcagcggatagtggtggttttataatcggttggaagatagactccaaagga
caactcttcatgacgtttcatcacgaactgaaggaatcttttacacaaattgcattcaga
acagtcccgctaaaaccagccattgatattagtggtttagcaaaggcggcagtagccggt
gatgagagagccttggatctattcagttcctggcgtccgagaactgccgctccaacagca
gtccccgcacagcgggacaaccattcgttttacattggcactttaaatggcatcatatat
tttgtcgatgctcaaggacaatgcaaggaagttctttctactgatggtgcagcattaaac
tgcttattgtatcatcagactagagactctatcattgttatgacagaaggattgaacatt
ggacactttcaagtaaacccaatcaatggagaactcaccgaattgacaaaggtaaaacta
agcggcagaagcgatgtgtcacgcgccaccggtaccgttctgtgttggattggtggaaac
acattgtccgtgctcacaggagagctcgctgtacgatgttgggatcttcacacgggcgac
acgtacgtcctgtcgcctccggattcgtccaacggaaatatcgccactcctcaagaaatg
ttcactagcttgacgttttgtaagggcaatgacaccttggccgccggcaccaacttgggc
acgatctatttatggaagcgaaaatgtgtgtctgactgtgatgagaattcttggccgagt
atcccggaatcctgcacgattcacggcacggtgaagcaattggtgtggggcgtcagttta
tcacggaactctcttttggccgttaactgcatcaccaatgtgtttatcctgcatcaacaa
ccgatgtgtgccgtatacaatgacggcgtttgcgcgagccagctcactccgacacagatt
ctgctcgagatggacgagcagatgtatactctaaagacggagatgcaggtgcaagtcatc
gctgtatcaagggaatacattgctgtatcttctggcagacagatcaacgttaatcgcatc
aacaagggtgccaatctcaatacgaacgtattggcaaccttcagctgtgatacagaaaag
atgttgatatacgagcacacattgattgtgttgactccaacgataattcagctgcgctct
atagaaggttccgttattcagacgctccccactttgccagaggaaggcgaaccgatcaca
atggaattaacagggcattatttaactgtagcatcgttaaacggcattctaaaaatttgg
aatttgggcaaacacgaggctaagctacacactcgcgccatggcgacgtatgaagcgatt
agtgattttgccgaaattattgaggccagatgtaattcggattgtcgctgcgtctcaatt
accgtcgccatggcgaatcttatgcccagttcggttttatatatttgggatatcgaaagc
gatcagattcatgaatttgattttggagaatcaaacgacttagttgacgatgatatgtta
gttgcgcaatgcaaaggaaggttgatcacagcgcattgttgggacgtggaggatcccagg
ctattagtatgtcgagctcagagattggaaagccgtgattccaagagtttcaataaggac
aatgatcggactgtacaagcctctgtcgtgttagtatcattatttgcgacgtccgatcac
ggtatagtaatacaggatgtgaagccgatcacagatgagaattgtcgattgttaggtgtg
cgttcgccacatattgttatcctgaattctgaaaagagtttggataggaatagcaagatc
atacagttattaatgagagactttgaggaactgggagattgcgattccattaccaagaaa
gcagtgatggactttagttatcatattagtgtggcaaacatggaagaagcctttaaagcc
attaaatctataaagaatgaggctgtttggaagagcttagccaaaatgtgcgtgaaaaca
aagcaactaaatatggcactcctatgcttgggtcatatgaagcaagctaatgccgcgcgg
gctttacgcgaagcgatgcaggacgatagcttgaacttggaagcgcaagtaggaattttg
gccgttgaacttggccttcatattgacgctgaacgtctatttcgcgaagcgaaacgtctg
gatctactgggacgactgtatgaagcacggaacaaatttaaagaagcaatcgagttagct
aacaatgagaacaagatccgcgaaaagacgagttattacaattacgctcgtgcgctggag
caacagggtaaaatggcggaagctatcgatatgtatacgaaggccgattgtcatcgattc
gaagtgcccaggatgcttttgacgagacctcgagagttgcttacgtatttaaataattcc
gaagaatcggagattaagaattggcatgcccaatacaccgaatcgactggtgacatggag
actgctctacatctgtacgaacaagccaaagatactctctcgatgacgaggctgctttgt
tactttggcagagaagatgaagtgtgcgagctggtgactagaacaaatcacgctgcagcg
gcatatcatcttgctgcacattacgagtcgaaaaataatgtggtacaagcggttcatttc
tacacggttgctaaagcttacactaatgcaatacgactgtgcaaggaacatagcatgcta
gaagaattgtggccattggctatactagcaccgcggcactcacagatagacgtcgctaag
ttttatgaggataatgatcaaccggatcgcgcggtgctgttgtatcacaaagctaacctt
ctgcacaaggctttggacgttgcgttccgaatgcgacagtacagtgcgttacaactaatc
atcatggacgtgaacgctgattctgatccggcgttaatccataaatgcgctgattacttc
atgcagaacgaccagatcgataaagcggtggacttgctcgcaatcggcagggactacatg
gcggctttagatctgattcaacagcataacgtcgtgttgagcgaggaacttgcagagaag
ttgacggtcgagaaaggaagcgacgatgatgctgagcacgaacgtacaaggatttctacg
ctcgaaaaaatcgcggagatcgccttcgagcaaggaaactaccatcttgcgaccaaaaaa
tttacacaagctggtaacaagctgcgtgctatgaaggcgctgctcaagtccggagatacc
gaaaaaatctgcttctttgcacaggtctcgcggaatcgcgaaatctacatcatggcgggc
aattatttgcaatctctggactggcagaatcaaccagaagttctgaagaatataatcaat
ttctattccaagggaaaggctatggatctactggcgaatttttacgtggcttgtgcgcag
gtagagattgatgagtttcaaaattatgaaaaggcactagacgcgctgaatcaagcgagt
aggtgtctatccaaggtgatgacaccgcgagatcccgatgttcacaagcgagcggtggaa
ttggtgaataatagaatgtcggcgattaaacgctatttggacattaaaagattgttcgag
agaagtgaaacagagacggcgatgcaacaagttcgtcatctactagactctcaaggacct
aatctggaacagtcggtgcgtcatggtgatttatttgcaatgattacacaacattatgct
aatataggagacaccgagaaagcttgggcgaccatcgaagaattgaaacgtctagtacca
ggaattaatttaacttattattttaatgtaaatcttctagaagcgttgggctataaaatg
aaagtgcatcggcaagacagttccgacaaagacgatggaatcgaagaacttttaggagag
taa

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