Solenopsis invicta (red fire ant): 105202997
Help
Entry
105202997 CDS
T03916
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105202997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202997
03036 Chromosome and associated proteins [BR:
soc03036
]
105202997
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105202997
Coactivators
SAGA/TFTC/STAGA complex
105202997
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105202997
STAGA complex
105202997
TFTC complex
105202997
SAGA complex
105202997
SLIK complex
105202997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
WDR54
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
105202997
NCBI-ProteinID:
XP_039307662
LinkDB
All DBs
Position
7:complement(17233351..17248328)
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKNTMLAVLQLLKKYNLKGTEELFRKEANLTDISIDDAQQSDSDVTSVLSAYKSEGD
PAQYDKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSVN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAMVGEATRQDNKAKVYYGLLKEPDIQCMAPAEE
EEDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKMEKVKALREA
SKRVILGPDTLPSICFYTMLNTVYTVTAAEVAEDSSLLATGFSDSGIKVWSLIPQKLRLM
KTGEDLQDINREADDVLVRMMDERTSETARHLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVASGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLTFSTEGRFLASA
GADYRVLVWDLAHGHLVAALSGHTANIHCLSFSRDGNILVSGSLDCTLKLWDFTKLAEEM
SLEDVNVSHNPDVKTNSESYLLRTFATKNSSILALHFSRRNLLLGVGMFDSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataacgataaaaataccatgcttgcggttttgcagcttttgaagaagtacaattta
aaaggaactgaggaattgtttagaaaagaagctaatcttactgacatctcaattgatgat
gctcaacaatctgattccgatgtgaccagtgtcctttccgcttacaaaagcgagggagat
cctgcacaatatgacaaagcttacagtgaattaaaaaagtttgtagaaggagctttggac
atttataagcatgagttgggcaccatattatatccagttttggtacacatgtatctggaa
ttggtttataataatcattccaaagaagcaaaacaactcatggaaaagttcagcgtaaat
ttagaagaatattatcaggatgatttaaagagattatccaatgtaacaaaacgagagcaa
atggcaggaaatgaattaactgacacttttaaatctaatcagtttataatcagaatgtca
cgcgatactctttcaatattaaaacgacatttgcaagaaaagaagcatagtgttttatta
aacatcatacaggagcatctttattttgatatgtatgagggtgttgctcgtaataaacag
cagatagaagcaacatctggagctatggttggagaagccactaggcaagataacaaggcc
aaagtatattacggacttttaaaagaacctgatattcagtgtatggcaccggccgaagaa
gaggaagatgacacaggtggcggagatggagataaaccgaagaagaaaaaggctaagaag
gatccattgttttcaaagaagacaaaatctgacccgaatgcaccacctgtgggcagaatg
ccattgcccaatctgaaagatgcagataaaatggaaaaagtcaaagcgttgagagaagca
tcaaagagagttatccttggacctgacacattaccatctatatgcttttatacaatgtta
aatactgtttatactgtaacagcagcagaagtcgcagaagactcaagtttattagctacc
ggatttagtgattctggcataaaggtatggagtttaatcccacaaaaattaagattgatg
aaaacgggcgaagatttacaagacattaatagagaagcagatgatgtattggttagaatg
atggatgaacgaacatctgagactgcaagacatctctatggtcatagtggaccaatttac
agtctttcatttagtccagatagaaatcttttactttcgtcatcagaggatactacaata
aggctatggtcgctgcacacatggacatgtgtggtgtgctacaaaggccatttatttccc
gtgtggtgtgtgagattctcaccacatggttattactttgcaagtgcttcgaatgataaa
actgccagactatgggcgactgactctcatcagccattacgaatatttgctggtcattat
tcagacgttgatgtaattcaatttcatccaaattcaaattatgtcgcaagcggttcaagt
gatatgactgtaagattatgggactgtgtaactggtagtcaagtccgattgatgactggg
cataaagggccgattttttctttaactttctcaacagaaggacgctttttagcatcagct
ggggcggactaccgcgtgcttgtatgggatttagcacatggccatcttgtcgcagcttta
tccggccatacggctaatattcactgtctatcatttagtcgagatggcaatattctagtc
tcaggttccttagattgtacattgaaattatgggactttaccaaattagcggaggagatg
agcttggaagatgtcaacgtatcccacaatccagatgtgaaaactaactcggaatcttac
ttgctgcgtactttcgcgacaaaaaattcgtctattctagcattacatttttctcgtaga
aatttactgctaggtgtcggtatgtttgattcggcataa
DBGET
integrated database retrieval system
