Solenopsis invicta (red fire ant): 105202997
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Entry
105202997 CDS
T03916
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105202997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202997
03036 Chromosome and associated proteins [BR:
soc03036
]
105202997
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105202997
Coactivators
SAGA/TFTC/STAGA complex
105202997
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105202997
STAGA complex
105202997
TFTC complex
105202997
SAGA complex
105202997
SLIK complex
105202997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
NBCH_WD40
DSE1_N
Beta-prop_TEP1_C
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
PAC11
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
ASA1
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_DCAF12
TRM82_WD
DNAI3_WD
Motif
Other DBs
NCBI-GeneID:
105202997
NCBI-ProteinID:
XP_039307662
LinkDB
All DBs
Position
7:complement(17233351..17248328)
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKNTMLAVLQLLKKYNLKGTEELFRKEANLTDISIDDAQQSDSDVTSVLSAYKSEGD
PAQYDKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSVN
LEEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAMVGEATRQDNKAKVYYGLLKEPDIQCMAPAEE
EEDDTGGGDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKMEKVKALREA
SKRVILGPDTLPSICFYTMLNTVYTVTAAEVAEDSSLLATGFSDSGIKVWSLIPQKLRLM
KTGEDLQDINREADDVLVRMMDERTSETARHLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVASGSSDMTVRLWDCVTGSQVRLMTGHKGPIFSLTFSTEGRFLASA
GADYRVLVWDLAHGHLVAALSGHTANIHCLSFSRDGNILVSGSLDCTLKLWDFTKLAEEM
SLEDVNVSHNPDVKTNSESYLLRTFATKNSSILALHFSRRNLLLGVGMFDSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataacgataaaaataccatgcttgcggttttgcagcttttgaagaagtacaattta
aaaggaactgaggaattgtttagaaaagaagctaatcttactgacatctcaattgatgat
gctcaacaatctgattccgatgtgaccagtgtcctttccgcttacaaaagcgagggagat
cctgcacaatatgacaaagcttacagtgaattaaaaaagtttgtagaaggagctttggac
atttataagcatgagttgggcaccatattatatccagttttggtacacatgtatctggaa
ttggtttataataatcattccaaagaagcaaaacaactcatggaaaagttcagcgtaaat
ttagaagaatattatcaggatgatttaaagagattatccaatgtaacaaaacgagagcaa
atggcaggaaatgaattaactgacacttttaaatctaatcagtttataatcagaatgtca
cgcgatactctttcaatattaaaacgacatttgcaagaaaagaagcatagtgttttatta
aacatcatacaggagcatctttattttgatatgtatgagggtgttgctcgtaataaacag
cagatagaagcaacatctggagctatggttggagaagccactaggcaagataacaaggcc
aaagtatattacggacttttaaaagaacctgatattcagtgtatggcaccggccgaagaa
gaggaagatgacacaggtggcggagatggagataaaccgaagaagaaaaaggctaagaag
gatccattgttttcaaagaagacaaaatctgacccgaatgcaccacctgtgggcagaatg
ccattgcccaatctgaaagatgcagataaaatggaaaaagtcaaagcgttgagagaagca
tcaaagagagttatccttggacctgacacattaccatctatatgcttttatacaatgtta
aatactgtttatactgtaacagcagcagaagtcgcagaagactcaagtttattagctacc
ggatttagtgattctggcataaaggtatggagtttaatcccacaaaaattaagattgatg
aaaacgggcgaagatttacaagacattaatagagaagcagatgatgtattggttagaatg
atggatgaacgaacatctgagactgcaagacatctctatggtcatagtggaccaatttac
agtctttcatttagtccagatagaaatcttttactttcgtcatcagaggatactacaata
aggctatggtcgctgcacacatggacatgtgtggtgtgctacaaaggccatttatttccc
gtgtggtgtgtgagattctcaccacatggttattactttgcaagtgcttcgaatgataaa
actgccagactatgggcgactgactctcatcagccattacgaatatttgctggtcattat
tcagacgttgatgtaattcaatttcatccaaattcaaattatgtcgcaagcggttcaagt
gatatgactgtaagattatgggactgtgtaactggtagtcaagtccgattgatgactggg
cataaagggccgattttttctttaactttctcaacagaaggacgctttttagcatcagct
ggggcggactaccgcgtgcttgtatgggatttagcacatggccatcttgtcgcagcttta
tccggccatacggctaatattcactgtctatcatttagtcgagatggcaatattctagtc
tcaggttccttagattgtacattgaaattatgggactttaccaaattagcggaggagatg
agcttggaagatgtcaacgtatcccacaatccagatgtgaaaactaactcggaatcttac
ttgctgcgtactttcgcgacaaaaaattcgtctattctagcattacatttttctcgtaga
aatttactgctaggtgtcggtatgtttgattcggcataa
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integrated database retrieval system
