Solenopsis invicta (red fire ant): 105203585
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Entry
105203585 CDS
T03916
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105203585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105203585
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105203585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
105203585
NCBI-ProteinID:
XP_011170706
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Position
3:complement(19231218..19234453)
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AA seq
527 aa
AA seq
DB search
MSGKRTATTELNHDNWNEEHEPEEAGTFALASNDILEKRVRKTAKRRLPSREGGSMKSAF
GTFTGFKTTPVTSLSPFNFLASSVNTTSSMTTSTASVTTENTSSRQIASNGAPKIPETDS
DKKEDDAKVQTPSDTSASKKISTKPETEKMKSHSSDYYAKLKGLNESVATWIKSHVDTNP
FCILTPIFKDYERYLKEITSKEEGTKVQTSHTSEHTMHTTQNDNKQDVSTEKKPEKSSFG
TVSTNTKPTLTTGTEWKPEKSIFSNITTNAKSIFSSTEQKADSPKSSMFGNVDITPDKSR
SIFGSVESNVASKSVFGNTNVESNPFLHKPAVSDGGNAIEEENKSNAKSVAPTFPTFSFG
QSSTTSNVTAGFSFGSAKPFSFAPQAVKPQDAEDKTDNENKDEEDEEPPKPDFKPVAEEG
AIYEQRCKVFVKKDNNFSDKGVGMLYLKPTPNGKTQLIVRADTALGNLLLNTLLTQSIPT
KRMNKNTIMLHCLPMPDSLPPPVIVLLRVKTSEVADELLEALNKHKN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaagcgaactgcaactacagaattgaatcatgacaactggaacgaggagcat
gaaccagaggaagcaggaacatttgcattagcatcaaatgatatacttgagaagagggtt
agaaaaacagcaaagcgtcgtttgccatcaagggaggggggctcaatgaaaagtgcattt
ggaacattcacaggtttcaaaactactcctgtaacaagtttgtccccattcaatttttta
gctagtagcgtaaacaccacttctagcatgactacttctactgcatcagtaacaactgaa
aatacaagtagcaggcagattgcgagcaatggtgcccctaaaattcctgaaactgattca
gataaaaaggaagatgatgccaaagtgcagacaccatcagatacaagtgcaagcaaaaag
atttcaactaagccagaaactgaaaagatgaagagtcactcctcagattattatgcaaaa
ctaaagggactgaacgagagcgtcgctacgtggataaagagtcacgtagatacaaatcca
ttttgtatattgacacctatatttaaagattatgaaagatatttaaaagagattacttca
aaggaagaaggtaccaaggtgcagacctcccatacttcggagcacacaatgcatactacg
caaaacgataataaacaggatgtaagcactgagaagaaaccagaaaaatcatcatttggc
actgtaagcacaaacacaaagcctactttaaccacgggaacagaatggaaacctgagaaa
tcgatattttctaacattaccacaaatgccaaatcaatattcagtagcacagaacagaaa
gcagacagtcctaagtcatctatgtttggcaatgtagacataacgcctgataagagtaga
tctatttttgggagcgtagaatcgaacgttgctagtaagagcgtatttggcaataccaat
gtggaaagtaatccctttttacataaacctgccgtttcagacggtggaaatgcgattgag
gaggaaaacaagtctaatgcgaaatctgtcgctcctacctttcctacttttagtttcgga
cagagttccactactagtaatgtaactgctggatttagctttgggagtgcaaagccattt
tcatttgctcctcaagcagtaaagccacaagatgccgaggacaaaactgacaatgaaaat
aaggatgaggaagatgaggaaccaccgaaaccagatttcaaaccagtagctgaagaaggt
gctatttatgaacaaaggtgtaaagtctttgtgaagaaagacaacaattttagtgataaa
ggagtcgggatgttatatctgaaaccaacaccgaatggaaaaacgcaattgatagtacgt
gccgacactgctttgggcaatttgttacttaataccctgttgactcaaagcattcctaca
aaacgcatgaataagaacacgataatgttgcactgcctaccgatgcccgattccttacca
ccaccagtcatagtgctgttaagagtaaaaacgtctgaagtcgcagatgaattactggag
gcgttgaataaacataaaaattag
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