Solenopsis invicta (red fire ant): 105203834
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Entry
105203834 CDS
T03916
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105203834
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
105203834
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DUF6739
Motif
Other DBs
NCBI-GeneID:
105203834
NCBI-ProteinID:
XP_011171054
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All DBs
Position
16:complement(5595847..5602703)
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AA seq
1357 aa
AA seq
DB search
MSSESQITSIVNDILKVEAIEEAFSCVLVHHPKKETEKVAAWHHELKTAVTGLTKEQQEA
AVRQFLSMAAAMTNHRRLQLLLSLLENLVHSNYLPARLVCECILSCDKLQYQLEDFWVEC
FVLIRHIIGGVDYKGVREIMKGCKEKVQTIPARLDASVQPQLKALENVIEYIFDRNACLL
PGYFIVNEIQKAYPDSKNWPHWKLAKLLSNFVESFRNTAQMVSIVGHSKMLPVVEHTGYA
DYLINPWLLDPTTLKFSLKGNLPYDPDLLKPQTELLRYVLEQPYSRDMVCSMLGLQKQHK
QRCIVLEEQLVELVITAMERAENETLPAEGIDGTVANHWVWLHLSSQLIYFILFQFACFP
SIVMAIHDKLAGRELRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLP
VPDYTQALCTHQMAITCIWIHLLKKAQTEPCTNIHRPIPHTLKVHHEFLQHLVMPNASLC
MGSDYRIALLCNAYSTNQEYFSRPMAALVDTILGTQKNQQQQPLQTLQNNAALANGPTTP
LSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIK
GFISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLH
LCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGA
DSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFFQQNSVAKENKQQIKKAVEEEY
RNWASMNNENDIIAHFSVPGTPPLFLCLLWKMILETDRISPIAYKILERIGARALSAHLR
KFCDYLVFEFANSVGGQHVNKCVDTINDMIWKYNIVTIDRLVLCLALRTQEGNEAQVCFF
IIQLLLLKAAEFRNRVQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQTSGG
PSQYQNLPVYFGNVCLRFLPVFDIVVHRYLEIPPVIKSLEILLEHLGCLYKFHDRPVTYL
YNTLHYYEKKLRDRPLLKRRLVSAVLGSLREIRASGWALSEAYQGYMTRYTDDAVSWVPD
LDYYIRLVQRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMALPVAPDVVANFL
LDVVAKGYTAVPSDEIHLWINCVGLLLAALPECYWSALHKRLLETISSPGLVTWQYNNLT
PFQMFNFNITHNSLLENKYSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPVVSSEEQLI
YACHLIGPTLARFNAERPHCVVELAVCLYEMLECVDHTQTTLNYMDPICDLLYHIKYMFV
GDMTKNEVECIIRRLRPALQMRLRFIAHINIDEIHTS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgagagtcagatcacgagtatcgtaaacgatattttgaaggtagaggcgata
gaggaagcgttcagctgtgttctcgtccatcatcctaagaaggagaccgagaaagtagcg
gcatggcatcacgagctgaagacagccgtgactggcttgacgaaagagcagcaagaagcg
gcggttcgtcagttcttgtcgatggcggcggctatgacaaaccatagacgattacaatta
ctgctgtcgctactagagaacttagtacattcaaattatttacctgctaggctggtatgt
gaatgcattctcagttgtgataaattgcagtaccagttggaagatttttgggtcgagtgt
tttgttctgattagacatatcattggtggtgttgactacaagggagtcagagagatcatg
aaaggatgcaaagaaaaggtccaaactataccagctcgattagatgcatcagtacaaccg
cagctgaaggctttggagaatgttattgaatatattttcgatagaaatgcgtgcttacta
ccaggttattttattgtcaacgaaatacagaaagcttatcccgacagtaagaattggcct
cactggaaactggcgaagttgctttccaattttgtcgaaagttttcgaaataccgcgcaa
atggtgtctatagtaggacactcgaagatgttaccagtggttgaacatacaggatatgca
gactatttgattaatccttggttattggatcctacgacactaaagttttctttgaaagga
aatctaccttatgatccagatttgcttaaacctcagacagaattgctcagatatgttctg
gagcagccatatagcagagacatggtctgttcaatgcttggtttgcagaaacagcacaag
caacgatgcattgttttggaagaacaacttgtggaactcgtcataaccgcaatggaacga
gcggaaaatgaaacgctaccagcggaaggtatagacggaacggtagctaatcattgggtg
tggctgcacctatcttcgcaacttatctattttattctctttcaatttgcctgtttcccg
agtattgttatggcgatacacgataaattagcgggtagagaattgagaaagggtagggat
catttgatgtgggtccttctacagtttatctctggtagcattcaacggaatcccttgtca
aattttttaccagtgcttaaactgtatgatcttctctatccggaaaaagaacctctaccc
gtcccggattacacccaggctctgtgtactcatcaaatggcgataacgtgtatatggatt
catttactgaagaaagctcagaccgagccctgcaccaacattcacagaccgattccgcac
acactgaaggttcaccacgagtttctgcagcatctggtcatgccgaatgcttcactttgc
atgggttccgattatcgaattgcactcttgtgcaatgcgtactcgacgaaccaggagtat
ttcagtagaccgatggcagcgctggtggataccattctgggtactcagaaaaatcagcaa
cagcaacccctgcagactctgcagaacaacgcggcgctggcgaatggtccgaccaccccg
ctttcaatgtctattttggattctttaactgtgcactcgaagatgagcctaatccacagc
atcgttacgcatgtgatcaaattggcacaatccaagagcaatatggcgttagcaccagca
ctggtcgaaacttacagtagactgttggtgtacacagagatcgagagccttggtatcaaa
gggttcatcagccaattgttgccgacggtattcaaatcacatgcctggggcacactgtac
acgttgttggaaatgttcagctataggatgcatcatattcagccgcattacagggtacag
ctgctatcgcatttgcatagcctcgcagcggtcccgcagaccaaccagacacagcttcat
ttgtgcgttgaaagtacagccttgcgacttattaccggactgggttccgcggaagtacaa
ccacaactgtctagattcctgtcggagccaaagaccctcgtatctgcagaatcggaggaa
cttaaccgagcattggtattgacactggcacgatccatgcatgtaaccggcaccggtgcc
gacagtctcagcggcacctggtgcaaggaactgctgaacaccatcatgcaaaatacacca
cattcttgggctaatcacacccttcagtgctttccgccggtattgagtgagttttttcaa
cagaatagcgtggcaaaggagaacaagcagcaaataaagaaagcggttgaggaggaatat
agaaattgggcatccatgaataacgagaatgatatcattgcgcatttctctgttcctggt
acgccaccgttatttttatgccttctctggaaaatgatactcgagaccgaccgtattagt
cctatcgcgtacaaaattctcgagagaattggtgcgagagcgctgtcggctcatctcaga
aagttttgcgattatctggtgttcgagtttgccaacagtgtcggcggtcagcatgtcaat
aaatgtgtggacactatcaatgacatgatctggaaatacaacatagtgaccatcgacaga
cttgtgctttgtctagcccttagaacccaggaaggcaacgaggctcaagtgtgctttttt
atcatacaattgttgcttctaaaagcggcagaatttaggaaccgtgtacaagaatttgtc
aaagagaactcgccggagcattggaaacaatcaaactggcatgaaaagcatttggccttc
cataggaagtttccagaaaagtttgcgccagagggtattatggagcagactagcggcgga
cctagtcaatatcaaaatctgccggtgtattttggaaatgtatgtctccgatttttacca
gttttcgacatagtggtgcaccggtatctggaaataccacctgttatcaaaagcttggaa
atactgctggaacatttgggctgtttatacaaatttcatgatcgacctgtcacgtatctt
tacaatacgttgcattattacgagaaaaagttgcgagatcgaccgttgttaaagcgtcga
ttggtgtccgccgttttgggatcgttacgagaaatcagagcgtcagggtgggcgctttct
gaggcttatcaaggatatatgacacgctatactgacgacgccgtctcgtgggtaccagat
ttggattattacattcgacttgtacagagaatcgtagaaacaatgtctggtacggctcac
tttcctgctactgattggagattcaacgaattcccaaatcctgcggcacatgcattgtac
gtgacctgcgtcgaacttatggctcttccggttgctccagatgtggtggctaacttttta
ctggatgtcgttgctaaagggtacactgcagtgccatcagacgagatacatttatggata
aattgcgttggcttattattggcggcgttacctgaatgttattggtcggcgttgcacaaa
cgtttactcgagactatcagcagtcccggcctggttacttggcaatacaataacttgaca
ccatttcaaatgtttaacttcaacattacacataacagtctgttagaaaacaagtacagc
tatatgcttgcactggcgcattccgtgtggcatcacgcgggtgtaggacagatcacaacg
atgcctcagtttatcaaggagaaacttcagccagttgtaagcagcgaagaacaattaata
tatgcttgtcatctaattggcccgactctagcgagatttaacgcggagcgaccgcactgt
gtggttgaacttgctgtctgtctgtacgagatgctggaatgcgttgaccacactcaaacc
accttgaattacatggatccaatttgcgatctattgtatcacatcaagtatatgtttgtc
ggcgacatgacgaagaacgaagtggaatgtatcatacgaagactaaggcctgcgttgcaa
atgaggttgcgttttatcgctcacataaacatagacgagatccatacatcctaa
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