Solenopsis invicta (red fire ant): 105203948
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Entry
105203948 CDS
T03916
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soc03036
]
105203948
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105203948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Ctf4_C
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
HMG_WDHD1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
105203948
NCBI-ProteinID:
XP_011171190
LinkDB
All DBs
Position
3:complement(20686802..20691326)
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AA seq
943 aa
AA seq
DB search
MPLIRKPMRYAHQEGHTDVCYYSGEKRGLVTCGCDGDVRSWLNLMDDDPTTSCISEQAIT
AISKDGKIYVGNDNNTVQILTYPDLEKEGIVTRFSAPVSALATAKDSSLIVSGACDMRIQ
VTNINTSDSIELEGHEAPILGLSLDPKEQFVASSSADGSIRVWNIKEKRIVHVWNNIFPK
CNSFFTAKLYCTPSFKCTDGSCLAYPSNKDVVIVERLSWKELYRLKCPTLKSELSICKFS
ECGTRVAASSLHGEIVVWDVETKEMIGYLEHEQITKITALAWHIDHSNEIAFCDALGKLG
CIDVISTSKPASEITFDSEKNEDVIENDIALPDDDDDDENVISLNKIKASINLEDDQKSQ
SDTDFEKPPCDTKAFVPNIKLQSSFQSGSTPSHLLSYFMMWNDVGMVRCFSSEDGEECSI
EVEFHDVTIHRSMHINNYLRHSLAALSTQALALSCAASEDGPSKIVVIALQGWGSGNKEW
ILDLPEGEESECLAAGDNFIAVATSRRNLRLFMIGGTQREILALPGPIVTMNGLGNHLVI
AYHAGIGPTGDQNINLLWIQIQGVHLRSQTLTLPLSPASDLMWLGLSDARSPTIMDSDDI
IRIYDKRSCQWRVLCDANVQGKGRADHYFIIGVSEYERNMRCILCKGSYYPPTTPRPIIT
EVPLSAPLCEPESEKTEKERKLWEIGSNLLDQTETMLTLIALACRSNLEYRAVDICEQIA
PTKVIELAVRYALRVNKMALANKLETIADGKIRSDSKDSKEEEEDTENHHDNFANNGDFS
IDSQEENDISLPSVKKPEIEIKPLTMSQTLKRKNPFLKAGSPSLSPKGLAGLNSLPEKPQ
KPALTKVVPVKSKSKTESKEGSFVKWYNKNKKNLQEEFPEGNVDELTKIGLTRFKEETAQ
SNADNTAGPSELFKKRKLSSSDNEHSEAKRAVSSKLNSFAFEK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgccattaataagaaaacccatgcgatatgcccatcaagaagggcataccgacgtctgc
tactactccggcgagaagagaggactcgtcacctgtggatgcgatggggacgttagatcc
tggttaaatttaatggatgatgatccgaccactagttgcatctcagagcaagcgatcaca
gcaatctcaaaggatggtaaaatttatgtgggaaacgacaataatacagtgcaaatactt
acttatcctgatttagagaaggaaggaatagtcactagattttcagcaccagtctcagca
ttagcaacagcaaaagatagcagtttaatagtatcgggtgcctgtgatatgcggatacaa
gtaacaaatattaatacttcagatagtatagaactagagggtcatgaagcacccatttta
ggcctatctttagatccgaaagaacagtttgtggcatcttctagtgctgatggttctatt
cgagtgtggaacattaaggaaaagagaattgtacatgtttggaataatattttcccaaaa
tgtaattctttttttactgcaaaattgtattgtacaccttccttcaagtgtacagatggc
agttgtctagcatatccatctaacaaagatgtagttattgtggagagattatcctggaaa
gaattgtatagattgaaatgtcctactttaaaatcagagcttagcatttgtaaattttcc
gagtgtggcacgcgtgttgctgctagttcactgcatggagagatagttgtgtgggatgtt
gaaactaaggaaatgattggatatttggaacatgaacagattaccaaaatcactgcattg
gcatggcacatagatcattcgaatgaaattgcattctgcgacgcattaggaaaattagga
tgcattgatgtgataagcactagtaagcctgcaagtgagataacttttgattctgagaaa
aatgaagatgtaatagaaaatgatattgctttaccggatgatgatgatgatgatgaaaac
gtgatatctctgaataaaataaaggcttctatcaatttggaagatgatcaaaaaagtcaa
tctgacactgactttgaaaagcctccatgtgatacaaaggcttttgtacctaacataaag
ttgcaatcgtcttttcaatcaggatctacaccttctcatttattatcatactttatgatg
tggaacgacgtgggaatggttagatgtttctcgtcggaggatggggaagaatgcagtatt
gaggtagaattccatgatgtcacgattcatcgcagcatgcacataaataattatttacga
cattctttagctgctttatctacccaagcacttgctctgagctgtgcagcgtctgaagat
ggtcctagtaaaattgtcgtgatagctttgcaaggttggggttctggaaataaagaatgg
attctggatctaccagaaggagaagaaagtgaatgtttggcagctggtgataatttcatt
gcagtagcaacatctaggagaaatttaagactatttatgatagggggtacacagcgtgaa
attttagctctacctggacctatagttacaatgaatggtctaggaaatcatcttgtgata
gcttatcatgctggaattggtccaacgggtgatcagaatataaatctattatggatacaa
atacaaggagtacatttacgcagtcaaactttaacgcttccactttcgccagcatcagat
ctcatgtggttaggattatcagatgctcgttcgcccactattatggattctgatgatatt
atcagaatatatgacaagaggtcttgtcaatggagagtactctgtgatgcgaatgtacag
ggaaaaggtagagcagatcactattttataattggagtgagcgaatacgaacgtaatatg
cggtgtatcctttgcaaaggtagttattatccaccgacaacaccgcgaccgataattacc
gaggtacctctatccgcacctctctgcgaaccggaatctgagaaaactgagaaagaacgt
aaactgtgggagataggaagtaatttgttagatcaaactgagacgatgttaactttaata
gcgcttgcctgcagaagcaatttggaatatcgtgcagtagacatttgtgaacaaattgcg
ccgacgaaagtgatagagttggctgtacggtacgccttgcgtgtaaataaaatggcattg
gcaaataaattggaaacgatcgcagatggaaagattcgatcggattccaaagattcaaaa
gaagaagaagaagatacggaaaatcatcatgacaattttgcaaacaatggtgattttagt
attgatagtcaagaagaaaatgatatatctttaccatccgttaaaaaaccggaaatagaa
attaaaccattgaccatgagtcaaacattaaaaagaaaaaatccatttttaaaagccgga
agtccatctttatcgccaaagggtttagctggtctgaacagtttaccagaaaagccccag
aaacctgcattaaccaaagtcgtgcctgttaaatcaaaatcaaagactgaatctaaagaa
gggtctttcgttaaatggtataataaaaataaaaagaatctgcaggaagaatttcctgag
gggaatgttgacgagttgactaaaatcggtttaacgcgattcaaagaggagacagcgcaa
tcaaatgcagataatacggctggaccttcggaactctttaaaaaacgaaagttatcgagt
tcagataacgaacatagcgaagcaaaacgagctgttagcagcaagcttaacagctttgca
ttcgaaaaataa
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