Solenopsis invicta (red fire ant): 105203967
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Entry
105203967 CDS
T03916
Name
(RefSeq) uncharacterized protein LOC105203967
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04137
Mitophagy - animal
soc04140
Autophagy - animal
soc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105203967
04137 Mitophagy - animal
105203967
04148 Efferocytosis
105203967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105203967
Transcription factors [BR:
soc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105203967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
105203967
NCBI-ProteinID:
XP_011171237
LinkDB
All DBs
Position
16:5750329..5785807
Genome browser
AA seq
1529 aa
AA seq
DB search
MNARLHEVAAEGREGDEARRGDENVILDDGRQQRGHCTDLRDYWIGKAGSGYAGVDERHI
AARGNEIDFPPCELLKAPLSSPPAPPPSYGPAISFGNVDVLPDNIAAPSSSITSHAGDNT
RSRARDIGTTSCSTMRFPPYAPAMSCNVACSNTPATACNVAPAGADCDGPEATWTFRDND
HHLPQPQAGTCAASTAAATSRTCQQGPVDVEDLAMYFDLPTDGCRPPPPTGNRAIYSRRS
RYGQAARIDRDRDTLQAFRHLSPCDLAPNDLRACDMGPSTLGYCDLGYNDGPSLRDPAYD
GSTRFCEPRLDESRFCGARQQPCEPGRHDLGRDDPESSNWFCNVCPELFNFCSEERWLQC
PMSDRCPLYDTSYAYGAPVLPPCMYKDGYYDNDNEWHYGYVEDEQLLEDYLSNEKRKERS
RDAARCRRSRETDIFTELAAVLPVAPEQAALLDKASVMRLAIAYLKVRAVVDSIPVSLAA
SETTAEIDELFPKALNGFMLVLSSDGNMVYLSENVRDYLGVSQMDMMGQSVYEYSHPCDH
DELRECLSLKSTDNNEKRACNFFLRLKCTLTSKGRKVNLKSASYKVIHCTGRLTNIRDSN
SNSMKVDNEERSKEIEEVEPDTGASLVLIGSPIPHPSNIEIPLGRHTFLSKHSLSMKFTY
ADEKLAEYLGWSSEELVGRSVYEFHHAFDNMALEKCFKCLFSKGQCETVAYRFLSKLGGY
AWVITQATVIHCSKQQKPISVVCVNYVLSGIEYDGHVVSLVQSKRDNSADLVKLERPLPA
LVPTGGAVASTADSSRASLDDEEKIPVPKEPAVDDKSRSDDRPFAVTASIFRSLPDDKRK
DDLRKGDALPKHSHEEKAFEQALKESLEQSIKESLKENDEPTPINRQSFAKKTPFVFQGK
PTVVRDSPNSVEQCNRPQSVTRNLFTSFAAAVQQQEQEQQQQQQQQHQQQEQPQLSCRPQ
TATASIFAPRTEDMNKGFLTFSEDQPGLTMLKDEPDDLTHLAPTAGDVCVPLEDTPFLSD
MDLEFVFGNDHYSCPLLSPGDTLAPELRSAELSGSLKDADLVDASTRTKDAVDRLADSDP
FMYGDSPGSPCGIDPNAVSSSLSKYRQSPERSVDSLGSPTGGSGGDGLSEDEMLMLGISD
SIGDEELALRAPYIPMSDQDEALELLINDDMVMWGSSQSADKGSSKWLFDDREQRNSESS
LAQLLRSDQAVSRRHNDHGGGFLNPTQILGQTPRKNAVFESDRWSSNQERTNKRIHSGLN
IDSENEYKRFKCEDAAFKHINLEDTLAKQQRLSTTLHKKLPPGLGNSCGSQLLRRLVSSQ
MPSIASQMGSLPDGGDNIRGERHLEDVSKQHTRIFDDIIDFVETEGDRGGGGGGGGESRG
SIGDGLDKIDATNRKRNPSCGTGGSSVLMNLLVSGCDDPLMNSRNILTMLSRSLTTPLSV
NVDNQIVPHCVNPNVTSLPDHLSPDTRKHLIGPFTGGGGSGGRDGGTTPIVSPTTSAMAS
FDGFDYDGSAGLLQMGSDLLGGLLDRNLV
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcgtttgcacgaggtggcagcagagggaagagaaggagacgaggcgaggcgg
ggggatgaaaatgtcatcctcgacgacggtcgtcaacagcggggtcattgcaccgatctc
cgcgactactggatcggcaaggccggctcgggttacgccggtgtcgacgagcgtcacatc
gcggcgagaggaaacgagatcgatttcccgccgtgcgaattactgaaagcgccgctgtcg
tcaccgccggcgccgccgccgtcttatggtccagcgatctcgttcggcaacgtggacgtc
ttacccgacaatattgccgcaccctcttccagtattacgtcacacgctggcgataatact
agatcacgagctcgcgatatcgggacgacatcttgctccacgatgagatttcctccgtat
gcgcctgcaatgagttgcaacgtggcgtgcagtaatacaccagcgacggcgtgcaatgtc
gctccagcgggcgccgattgcgacggtccggaggcaacgtggacgttccgcgataacgat
catcacttgccgcagccacaggcggggacttgcgcggcgagcacagcggcggcaacctcg
agaacctgccagcagggcccggttgacgtcgaagacctcgcgatgtactttgatctaccg
acggacggctgcaggccgccgcccccaacgggcaatcgcgcgatctactcgaggagatcg
cgatatggacaggccgcgaggatcgaccgtgatcgcgatactctgcaggccttccgtcat
ctgtccccttgcgatctagcgcccaacgatctgcgagcttgcgatatgggacccagcact
ctgggatactgcgatctgggatacaacgatggtccatcgcttcgtgatccggcgtacgac
ggctcgacgcgattttgcgagccgagactcgacgagtcgcgattttgcggcgcgagacag
caaccctgcgaaccggggcgacacgatctgggacgggacgatccagaatcgagcaattgg
ttctgcaacgtctgcccggaactgttcaatttctgcagcgaggaacggtggctgcagtgc
ccgatgagcgatcgctgtcccctttacgacacctcgtacgcttacggcgcccccgtcttg
ccgccgtgtatgtacaaggatggttactacgataacgataacgaatggcattacggatac
gtggaggacgaacagctcctcgaggattatttgagcaacgagaagaggaaggagaggtct
cgcgatgcagctcgctgcaggcgaagcagggagaccgatatcttcaccgaacttgcggcc
gtgcttccggtcgcaccggaacaggcggcgctcttagataaggccagcgtaatgaggttg
gcgattgcctacctcaaagtccgggccgtcgtggattccattccagtttcgctagcagcg
tccgaaacgacagcagaaatagatgaactatttccaaaagctctcaatggctttatgcta
gtactatccagtgacggcaatatggtttacctctcagagaacgtcagagattatctcgga
gtgtcacaaatggatatgatgggacaaagtgtatacgaatacagtcatccctgcgaccat
gatgaattgcgcgagtgcctctccttgaagtcaacggataacaacgagaaacgtgcctgt
aactttttcctgcggctcaaatgcaccctcacgagtaaaggcaggaaggtcaatctgaag
agtgcttcttacaaggtgattcactgcaccggcagattgacaaacatccgcgactcaaat
tcgaactccatgaaagttgataatgaagagcgaagcaaagagatcgaggaggtagaaccg
gacacaggcgcttctctggtgctcataggtagtcctataccccatcccagtaacatcgag
atacctttgggacgccatacctttttgtcgaagcacagtctaagcatgaagttcacctac
gccgacgaaaaattggccgaatacttgggttggagcagcgaggagctggtgggtcgttcg
gtttacgagtttcatcacgcattcgataatatggcgctagaaaagtgtttcaaatgcctg
ttcagcaagggccagtgcgagacagtggcgtaccgattcctcagcaagctaggcggctac
gcctgggtcatcacccaggccaccgtcatccactgctccaagcaacagaagccgatctcc
gtcgtctgcgtcaactacgtcctaagtgggatcgagtacgatggtcatgtggtcagcttg
gtacagagcaagcgtgacaacagtgccgatttggtgaagctagagagaccgttgccggcc
ctagtgccgaccggtggtgctgtcgcgtcgacggcggactcgagtcgtgcgtcgttggac
gacgaggagaagattcccgtcccgaaggaaccggccgtcgacgacaagtccaggagcgac
gatcgaccgttcgccgtcaccgcgtcgattttccgttcgcttccggacgacaagcgcaag
gacgatttgcggaagggcgacgccttgccgaaacactcccacgaggagaaggcgttcgag
caggcacttaaggagtccctggaacagtcgattaaggagtcactgaaggagaacgacgag
ccgacgccgatcaatcggcagtcgttcgctaagaagacgccattcgtattccagggtaaa
ccgacggtggtgcgcgattccccaaacagtgtcgaacaatgtaatcgtccacaatcggtc
accaggaatctattcacgtccttcgcggccgccgtgcaacaacaggaacaggaacagcaa
cagcagcagcagcagcagcatcagcaacaggagcagccgcaattatcctgccggccgcaa
acggccactgcgagtatcttcgcgcctcgtaccgaggacatgaacaagggcttcttgact
ttcagcgaggatcagccgggtctcaccatgttgaaggacgagccggacgacctgacacat
ctcgcacccacggccggcgacgtgtgcgtacccctggaggacactccctttctgtcagat
atggatctagagtttgtcttcggcaacgaccactacagctgtcccctgctgagtccgggc
gacactctggcgccggagctacgttccgcagaactgtcgggttccctcaaggatgcagat
ctggtggacgcttctaccaggaccaaggacgcggttgaccgtctggccgacagcgatccc
tttatgtacggtgactcgcccgggagtccctgcggcatcgacccgaacgccgtgtcgtcg
tctctctcaaagtatcggcagagccctgagcgcagcgtggactcgttaggtagtcctacc
ggaggcagcggcggcgatggcctctccgaggacgaaatgcttatgttaggtattagcgac
agcataggggatgaagaattggcgctcagagcaccctatattccgatgtcggaccaagac
gaggcgttagagttgctcattaacgatgacatggttatgtggggctcgtcgcagtccgcg
gacaaaggatcctcgaagtggctattcgacgatcgggagcaacgtaattccgaatccagt
ttggcacaattgctgcgaagcgaccaagcagtgtcacggcgacacaacgatcacggcgga
ggtttcctcaatccaacgcaaatactggggcaaacacctagaaaaaacgcagtcttcgag
tccgatcgatggtcttctaatcaagaacgtaccaataagcgcattcattccggactcaat
atagattccgagaatgaatataagcgttttaagtgcgaagacgcggctttcaagcatata
aatctcgaagatactttggcaaagcaacagcggctgtcgacgacgcttcataaaaaattg
ccgccgggtctcggcaacagttgcggcagccagcttctgcgtcgcctcgtctcgtcgcag
atgccgagcatcgcgtcgcagatggggagcttgcccgacggtggtgacaatatacgtggc
gaacggcatcttgaagatgtttcgaagcagcacactcgcatctttgacgatatcatcgac
tttgtcgagacggagggtgaccgaggcggtgggggaggaggcggaggcgaaagtcgaggt
agcatcggtgacggcctagacaagatcgacgcaacaaaccggaagaggaatccttcctgc
ggcaccggcggcagcagcgtgctaatgaatctcctggtttccggctgcgacgatcctctg
atgaattcccgcaatatactaactatgttatcgagaagcctgacgaccccgttgtccgtc
aacgtggataatcagatagtaccgcattgcgtaaacccgaacgtcacatccttgcccgat
cacctcagtccggataccaggaagcatttgatcggacctttcactggtggtggtggcagc
ggcggcagggacgggggtacgactccgatagtctcgcccacgacatctgcgatggcatca
ttcgacggctttgactatgacggatccgcgggtctgctccaaatggggtcagatctactc
ggaggactgctggatcgaaatctggtgtga
DBGET
integrated database retrieval system
