Solenopsis invicta (red fire ant): 105204021
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Entry
105204021 CDS
T03916
Name
(RefSeq) gastrulation defective protein 1 homolog isoform X1
KO
K24752
WD repeat-containing protein 70
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soc04121
]
105204021
03036 Chromosome and associated proteins [BR:
soc03036
]
105204021
03400 DNA repair and recombination proteins [BR:
soc03400
]
105204021
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105204021
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
105204021
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
105204021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
105204021
NCBI-ProteinID:
XP_011171315
LinkDB
All DBs
Position
6:complement(18669483..18673087)
Genome browser
AA seq
668 aa
AA seq
DB search
MNSKKTITFGKISANLNKSVSEEPVETSSSGGFGTFGKKREENNVKKMDEIKPEDEEETQ
NMQKMMGIMSFGKKAKSFDVQEMMENITKTINSNKQSVIEKEKPREIVEPKEDKVSDNND
DDEDDDNFIGPPIPSLMLVTSEATKDSNAEKKTEKTENDDDDDDDDNDKESEEEEEEEEV
TLRDKIPCSHEVSMTHGTKAVIAIAADPSGARLASGSIDYDVCFWDFAGMDTTMKSFRTL
QPCENHPIKCLQYSMTGDVILVISGAAQAKVLDRDGFEKCETVKGDQYITDMARTKGHTA
SLNSGCWHPFTKEEYMTCSQDSTCRIWNLYRPRAHKSLIKCRAQNGVKTIPTTCAYSREG
AAVACGCIDGSIQMWDHRKNFVNPSLMLRGAHAQSSEVSSLSFSYLGQLLASRACDDTLK
LWDLRAFKVPIFEAKGLFSRYDTTDCMFSPDDSMIVTGESLNKGETTGRVLFYDSKTFNL
VREIPVTNSHVIKTLWHPKLNQVFVGCGNGIVKVYYDSKKSMRGAKLCVVKTHMKQKHIE
IMSTQQIITPHALPLFRQDRPKSVRKQMEKDRLDPVKSRRPDLPITSGQGGRVASSGGTL
SSYVIRNLGLSKRIEDDQDPREAILKYAKIAEEEPYWIAPAYKKTQPKTIFQNDDQDSSG
PSNKKQKT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaaaagaccataaccttcggcaagataagtgccaatttgaataaatcagtg
tccgaggaaccagtagagacttccagctccgggggattcggcacttttggtaagaaacgt
gaagaaaacaatgtgaaaaagatggatgagatcaagccagaggatgaggaagagacccag
aatatgcagaagatgatgggcatcatgagttttggtaagaaggccaagtcctttgatgtg
caggaaatgatggaaaacatcaccaagaccataaacagcaacaaacaaagtgtgatcgaa
aaggagaaacccagggaaattgtggaacctaaagaggacaaggtgagcgacaataatgac
gatgacgaagacgacgacaatttcattggcccacctataccatctttgatgcttgttact
tcggaagcgactaaggattccaatgcagaaaagaagactgagaagactgaaaatgatgac
gatgacgatgacgatgacaatgataaagaatctgaagaagaagaagaagaagaagaggta
acattgagggacaagattccttgttctcatgaggtctcaatgactcatggcaccaaagca
gtgattgccattgcagcggatccatcaggggctcgactagcgtccggctccattgactat
gacgtctgtttctgggattttgctggcatggacacaaccatgaagagcttcaggaccttg
cagccctgcgagaatcatcccatcaagtgcttgcagtattctatgaccggggatgtgata
ctggtgatctcaggggcagcgcaggcaaaggtcctggatcgagatggctttgagaaatgc
gagactgttaagggcgatcagtacatcacagatatggcgcgcacgaagggccataccgcc
agtctaaacagcggttgttggcatccattcacaaaagaagagtatatgacctgttctcaa
gacagcacctgtcgaatatggaatttatataggccgcgtgcacataagagcctgataaag
tgtcgtgcgcaaaacggcgtgaaaactattcctaccacgtgcgcctacagccgagaaggc
gcggccgttgcttgcggttgtatagacggctcgattcagatgtgggaccacaggaagaat
tttgtgaacccatcccttatgttacgcggtgcgcacgcacaatccagcgaggtgtcgagt
ctgagcttctcgtatcttgggcaactgttggcgagcagagcctgcgacgacactttgaaa
ttgtgggacttacgagcgttcaaagtgccaatctttgaagccaagggactgttctcgcgt
tacgataccacagattgcatgttcagtccagatgactcgatgatcgtcacgggggaatct
ttgaacaaaggagagacgactggcagggtgttgttctatgacagtaaaacattcaacttg
gtcagagagattcccgtgacaaactcgcatgtgataaagactctatggcacccgaaattg
aatcaggtgtttgtcggctgtggcaatggcattgtcaaggtatactacgattccaagaag
agcatgagaggcgccaaattgtgcgtcgtcaagacgcacatgaagcagaagcacatcgag
ataatgtccacccagcagattataacacctcacgcgcttcccctattccgtcaggacagg
cccaagtcagttcgcaagcagatggaaaaggataggctcgatccggtgaaatcgaggcgt
ccagatttgcctatcacctctggccagggtggcagagtggcatcctccggaggaacgctt
agttcctacgttatacgcaatcttgggctgagcaaacggatagaggacgatcaggatccc
agggaggctattctcaagtacgcaaagatagctgaggaagaaccgtactggatcgcaccc
gcgtacaagaagacgcagccgaaaacaatttttcaaaacgatgatcaagatagtagtggg
ccgagtaataagaaacaaaaaacttag
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