Solenopsis invicta (red fire ant): 105204639
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Entry
105204639 CDS
T03916
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105204639
03036 Chromosome and associated proteins [BR:
soc03036
]
105204639
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105204639
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105204639
SLIK complex
105204639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
105204639
NCBI-ProteinID:
XP_011172094
LinkDB
All DBs
Position
3:complement(32324336..32342602)
Genome browser
AA seq
1800 aa
AA seq
DB search
MQKTLESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSCSGSGSDSEKSE
KSDAPAAQSDSFQSKGSNHSTEAKVRVKHESSREWDENPDIYGIRRSGRSRKEPDRLVTN
RESDSDGRKKFKKKGSHNSWNSESSDSESDETENRRPPPSKSLNRRAAQKAKEKAKVRKK
HISESSDNSSYDSDDNRRQASRRTGTAVSYKEESEEGTDSEDLVEVDEPNAASTEPDNAE
TIETILAQRTGKKGVTGNVTTIYAVEENGDSNPKDLSNMETEVQYLIKWKGWSHIHNTWE
SEESLKAQKVKGLKKLDNFIKREYRIQQIRDQAEPEELDYLECQLELKQDLLKSYYNVER
IIADYKKPDSEHPDYYCKWENLSYAEATWEDGTLIVKKWPEKIKEFRYREDSKRTPSKHC
KVLKSRPKFYQLNEQPAYMGQERDLVLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTI
QTICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMSLWAPDLNFVIYLGDVSSRNIIREY
EWCYRDSKRLKFNVILTTYEIVLKDKALLGALSWAVLLVDEAHRLKNDDSLLYKALTEFN
TNHRLLITGTPLQNSLKELWALLHFIMPTKFNSWEEFEKQHDNAAQKGYSKLHKQLEPFI
LRRVKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYEALRKGVKGSTTTFLNIVIE
LKKCCNHAFLTKPIEAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMV
KMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLA
TADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLDH
LVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLTAILKFGAEDLFKDEEAGDEEPACDIDEI
LRRAETRDEGPTTVGDELLSAFKVASFKTAFEEDLEPINQPNDNDDESKDWAEIIPENFR
RKVEEEEKSKEMEDLYLPPRSRKTLQQLNQGEGRGRKRKRAQDDSDDGEESGSEAEGSDD
DRPKKRGRPRVLPRENIKSFTDGEIRRFIKSYKKFPAPLKRLDDIATDADLQEKPMSELR
FLGEQLMSRCDACLVEFENTAKENKGAEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAV
KELEPLEQALPSDPEQRANWHLDLKLKPANFECEWTSEDDAKLLKGIYQHGMGSWDAIKT
DTSLELGEKIFPNGNKAQLKRVNARAEYLLKILKKQIDLKLGVTRMRKPRKPKETKTAIT
KEIIEDNDSSGDENKKSKARIDKSAVKKEEESVIKKEIKEEVDDLTDEKKKDKKTKKEKK
DNKKAKKNKQTAGPMHFTANNEPRAVDIIGELDPPIFDECKEKMRPVKKALKALDKPDMS
LREEERVARARRFLCQIGDHINTCLAEYKTAEQVSEWKSNLWYFASKFTNFKAKKLYKMY
KNLIKQGGDNNGGTTSSPDKKEEASSTAKQKHNEKPSHEKHFDKQQLDSGNKDNRITKRK
VDDTEDNSNSSSQSKKHLSTISALTSNISSTSTVTIGAITITPITSTSNSTSNTTNSADV
SRHKEQKESKHKDMKRDRDRDRDRDRGHDRGDRLSISKDDRIRRDGYMGHYSGREDDHWL
SRDGRDMRDGRYGFDHKRDRFDPYGRMSSGYHRDRDRDRDRGMHMNDKRSDYSYRYSGPP
GYGYGPGGYGSSSGGYPPTDIPSSHFRNRGYAGDGYSDWRPNKDYRRDYDRRPPPPNANS
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgttagaatccgaatccggtaaggaatccgggtctgattctgaaaatgag
agcaaaagcgatagctcttcttctggtagtaacagcggctcgggatcgggatctgaaagc
gactctagctcttcgagcggttcctgttccggatccggctccgactcggaaaagtctgag
aagtcggatgcacctgctgcacaaagcgatagcttccagagcaaaggctcgaatcacagc
accgaagcaaaagttagagttaaacatgagtctagtcgagagtgggacgagaatcctgac
atatatggcatcaggagatctggccgttccaggaaggaacccgacaggctcgtgacgaat
cgcgagagcgacagtgacggtcgcaagaaatttaaaaagaaaggttcacacaattcgtgg
aattcagagagttcagattcagaatctgatgaaactgaaaatcgtagacctccacctagc
aaatccttaaacaggcgcgcagcacaaaaagctaaggagaaagccaaagtacgaaagaaa
catatctctgaatcttctgacaattcttcctatgacagtgatgataatagaagacaagct
agtagacgaacaggcacagcagttagttacaaagaggaaagcgaagaaggtaccgatagc
gaggatttggttgaagttgacgaaccgaatgctgcgtcaacagagcctgataatgcggaa
actattgaaaccattttggctcagaggacaggcaaaaaaggagttaccggcaacgtgacg
acaatttacgctgttgaagaaaatggtgattctaatccaaaagatctaagtaacatggaa
accgaagtacaatacttgattaagtggaaaggctggtctcacatacataacacgtgggaa
tcagaggaatctttaaaagcacaaaaagtaaaaggattgaagaagttggacaattttatc
aaacgtgaatatagaattcagcagattagagatcaggctgaaccagaggaattggattat
ttagaatgtcaattggaacttaaacaagatcttctgaaaagttattacaatgttgaaagg
attattgctgactacaagaaaccagactcggaacatcccgattattactgtaaatgggag
aatttatcgtatgccgaggccacatgggaagatggaactttaatagtgaaaaaatggcca
gagaagataaaagaatttcgctacagagaagattccaaaagaacaccgagcaaacattgc
aaagtccttaaatctcgacctaaattttatcagttgaatgaacaacctgcttatatgggc
caggagagagatttagtgttgagagattatcaaatggatggacttaattggatgatacat
tcttggtgcaaggaaaatagtgttatattagccgatgaaatgggtcttggtaaaacaatc
caaacaatatgcttcctttactacttatttcacacgcagcagcttcatgggccattttta
ctagtagttcctttgtcgacaatgacttcctggcaaagagagatgtctctgtgggcacct
gatttaaattttgttatttatttgggcgatgtcagttctcgtaatattattagggaatac
gaatggtgctaccgagattcgaagagactgaagttcaacgtcatacttacgacgtatgaa
atagtacttaaggacaaagcattattgggtgccttaagttgggcggttttgctagtggac
gaagctcatcgattgaaaaatgatgattcgctattatacaaagcacttactgaatttaac
actaatcatcgtttattgattactggtactccgttacaaaacagtttgaaggagctgtgg
gccttattacatttcattatgcctactaaatttaactcttgggaagaatttgaaaagcaa
cacgacaatgctgcacagaaaggatactccaagttacacaagcaattggagccatttatt
ctacgtcgagttaagaaagatgtcgagaaatctttgcctgctaaagtcgagcagatttta
cgagtagaaatgacatctgtacagaaacaatattataagtggatattaaccaaaaattat
gaggcgttgcgaaaaggtgtaaaaggatctactacgacatttttgaacatcgttattgaa
ttaaaaaaatgttgcaatcatgcttttctcacgaaaccgattgaagccgaaagggaaaag
actaacgaagattacttgcagcaattaattcgtggttctggcaaattagtgcttctggat
aaattactagtgagattgcgtgacaccggacatagagtattgatattcagtcagatggtc
aagatgttggatattcttggtgaatatctgcaaaggaggcattttccattccaaagatta
gacggaagcataaagggggaactacggaaacaggcattagatcatttcaatgctgaagga
tcacaggatttttgttttctattgtcgacgcgagccggtggccttgggattaatcttgcc
accgcagacactgtgataattttcgactctgactggaatccgcaaaatgatttgcaagcc
caggccagagcgcatcgaataggacaaaagaataaggttaacatctatcgattggttacc
aaaaagtcggtcgaggaagaaatcgtcgaacgtgcgaagcagaaaatggtcttggaccat
ttagtgatacaacgaatggatacaaccggaagaacagtattagataaaaagaatgcaggg
accaatagtaatccatttaacaaagaagatttgactgctattttaaaatttggtgctgag
gatctatttaaagacgaagaagctggagatgaggaaccagcttgtgatattgatgagata
ttaagaagagctgaaacaagagacgaagggccgacaacagttggtgatgaattattgtct
gcctttaaagttgccagttttaaaacagcatttgaagaggatttagaacctattaatcag
ccgaatgataatgatgatgaaagtaaagattgggctgaaattattccggagaattttcga
aggaaggtggaagaggaggaaaagtcaaaggaaatggaagatctttatttgccacctaga
agtcggaaaactcttcagcaactcaatcagggcgaaggcagaggcagaaagcgcaaaaga
gcgcaagatgacagtgacgatggcgaagaatcgggtagtgaggcagaaggaagtgatgat
gatagacctaagaagagaggtagaccaagagtactaccgcgtgagaatattaaaagcttc
actgacggtgagatacgacgattcatcaagagttataaaaaattcccggcacctttgaaa
cgattagatgatattgcgactgatgctgatctacaagagaaaccgatgtcggaattacgc
tttttgggcgaacaattgatgtctagatgcgatgcatgtttagtagaatttgaaaatacc
gcaaaagaaaataaaggtgctgaagaagaaggcaagggaccgggtcgtaagagaggacga
ggacccacttttaagataggcggcgtaatggtaaatgcaaaatctttttcggctgcagtt
aaagaactcgaacctttggagcaagctctacctagtgatcccgagcaacgtgctaattgg
catctcgatcttaagttaaaaccagcgaattttgaatgtgaatggacttccgaggatgat
gctaaattattaaagggtatatatcagcatggtatgggctcatgggatgcaataaaaaca
gatactagtttggaacttggagaaaagatctttcctaatggcaataaagcacaactgaaa
cgcgtgaacgctcgtgcagaatatcttttgaagattctaaagaagcaaattgatcttaaa
ttaggagtgacgcgaatgagaaagccaagaaagcccaaggaaacgaaaacagcaattacc
aaagagattatagaagataacgatagttctggcgacgaaaataagaaatcaaaagccaga
attgataagtctgcagttaaaaaagaagaagagagcgttataaagaaagagatcaaggaa
gaagtcgatgatctaactgacgaaaagaaaaaagataaaaagaccaagaaagagaaaaaa
gataataaaaaggcgaaaaagaataaacaaactgcaggtccaatgcattttactgcaaat
aacgaaccaagagctgttgacataatcggtgaattagatccaccgatattcgatgagtgt
aaagagaagatgaggccagtaaagaaggcgttaaaggctctagataagccagatatgtct
ttgagagaggaagagcgggtcgctcgcgcacgtcgatttctttgccaaatcggagatcac
atcaacacgtgtctggcagaatataaaactgccgaacaagttagcgaatggaaaagtaat
ctttggtacttcgcttccaaatttacaaacttcaaagcgaagaaactttataagatgtat
aaaaatttgataaaacaaggtggcgacaataatggtggtaccacatctagtcccgataaa
aaagaggaggcttctagtactgcgaagcagaaacacaatgaaaagccgtctcacgagaaa
catttcgataaacaacaattagacagcggtaataaagataacagaataacaaaacgtaaa
gttgacgatactgaggacaactcgaatagcagttcgcaaagtaagaaacacctctcgact
atttctgctctcaccagtaatatcagcagcacatccacggttactattggtgctattacg
attacgcctataacgtcaacgtcaaattctacatcgaacaccactaacagtgcagacgta
tcacgacataaagagcaaaaagagtcgaagcataaagatatgaagagagatagagatcgt
gacagagatagagacaggggtcacgacagaggtgatagattgagtataagcaaggatgac
agaattaggagagacgggtacatgggacattacagtggtagggaagatgatcattggtta
tccagagacgggagagatatgagagacggcagatatggattcgatcacaaacgcgatcgc
ttcgatccttatggccgaatgtctagtggttatcacagagacagagacagagatcgagat
cgtggtatgcacatgaacgacaaaagaagtgattatagttatcgatactcgggaccacca
ggttatggatatggaccaggtggttatggtagtagcagtggtggttatcctcctacagat
attccatcgagtcatttcagaaatcgtggttacgcaggagatggctactccgattggcgg
ccaaacaaagattatagacgggattacgatagaagaccaccaccgccaaacgccaactcc
tag
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