Solenopsis invicta (red fire ant): 105204685
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Entry
105204685 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105204685
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105204685
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Helicases
105204685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Transformer
LicD
Motif
Other DBs
NCBI-GeneID:
105204685
NCBI-ProteinID:
XP_025987943
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All DBs
Position
3:32864215..32868084
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AA seq
592 aa
AA seq
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MKIQKWEDLDVRLSDPVLKTLKQLRFFNMTPVQAACIPLLLNGKDVAVEAVTGSGKTLAF
LIPLLEILQKRSEKWKIMETGAIIVSPTRELATQISEILGEFLKEIPSLKQVLLVGGVTL
KKDVETLKKGANIIVATPGRLEDVLSNRNSIGLNLCVKSLEFFVLDEADRLLDLGFSVTL
DSILSYLPRLRRTGLFSATQTKQVQQLIRAGLRNPALIVVKEKSNISTPINLKNNFTIVQ
PEYKLPVMIDFIRSIGFETKYMIFLPTCACVDYFSRVIQAVLPSINVLALHGKMKSKRYK
VFDKFRSAQSGILICTDVMARGIDISEIDWVLQYDPPCVASSFVHRCGRTARIGNEGNAL
LFLLETESAYVDFIKRNQKVELHQMERELDKDTVDECLQCMRQMQQKDRLVFDKANRAFV
SYVQAYSKHECNLILQLKDIDLGKLAMGFGLLRMPKMPELKGKDVSSFVGLEIDINTIPY
AHKQRELRRIKRLSEYRNTGVWTSNQNRCNRKKQTESWSESKKRKLERREKRSKRKERKE
LLKQQFSTTCNKRKRKRMNEEDIEQLAKDIALIKKFKKRKISQEEFDAAFQV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacaaaaatgggaagatttggatgtacgattgagtgatcctgtgttgaaaacg
cttaaacagttgagatttttcaatatgacaccggttcaggcagcttgcataccattatta
ttgaatggtaaagacgttgcggtagaagcagttactggcagtggcaagacactcgctttt
cttattcctttattggagatattacaaaaacgaagtgaaaaatggaagattatggagaca
ggagcgataatagtcagccctacgagagaactggctacacagattagtgaaattttagga
gagtttttgaaagaaattccatcattgaaacaagtgttactagtcggtggcgtgacgctt
aaaaaagatgtagagacgttgaagaaaggtgcgaatattattgttgccacacctggtaga
ttagaagacgttttgtctaatcgtaattctatcggtttgaatttgtgtgtaaaatctttg
gaattttttgtgttggacgaggcagatagattactagacttgggattctctgtgactttg
gatagtattttaagctatttgccacgtcttagaagaacaggattattttctgcaacacag
acgaaacaagtacaacaattgattagggcgggactaagaaatccagcgttgatcgttgtg
aaagaaaaatctaatatctccacgcctataaacttaaaaaataatttcacaattgtccaa
cctgaatacaagttgccagtaatgatagattttatacgctcgataggatttgaaacaaag
tatatgatatttctacctacttgcgcgtgcgtggattatttcagtcgagttatacaagca
gtattaccatcgataaacgtacttgctctacacggtaaaatgaaaagcaagagatataaa
gtgtttgataaatttcgaagtgcccaaagtggcattttaatttgcacagatgtaatggct
cgtggaatcgatatatcggaaatagattgggtattgcagtatgatcctccctgtgtggct
agtagttttgtacatagatgtggtagaaccgctaggatcggcaatgaaggaaacgcgttg
ctgtttcttctagaaacggagagtgcgtatgtagatttcattaaaagaaatcaaaaagtc
gaattgcatcaaatggaaagggaattggacaaggatactgtcgacgaatgcttacagtgc
atgaggcagatgcaacaaaaggatcgacttgtgtttgacaaagctaaccgtgcctttgtt
tcatacgtgcaggcatatagcaaacacgagtgtaatttaattcttcagttgaaagatatc
gatttgggaaagttggctatgggttttggtcttctgagaatgccaaaaatgccagaactc
aaaggaaaggacgtgtcatctttcgttggccttgaaatcgatataaatacgataccctat
gcgcacaaacaacgtgaattgcgtagaattaaaaggctgagcgaatatcggaacactggc
gtttggacgagtaatcagaacagatgtaatcgcaaaaagcaaactgaatcttggtccgaa
agtaaaaagagaaaactcgagagacgagagaaacgaagtaaacgaaaggaaaggaaggag
ttgttgaaacaacagttttcaacaacttgcaataagaggaagaggaagcgaatgaacgag
gaagatatcgagcagttggcaaaagatatagcgttaattaaaaaatttaaaaagagaaag
atatcgcaagaagaatttgatgcggcttttcaagtttga
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